RNA–Protein interactions for RNA: ENST00000510569.5

NUP54-209, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 494 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-209ENST00000510569 OR2T35Q8NGX2 323 aa2.21□□□□□ -2.06
NUP54-209ENST00000510569 LINC01560Q8TB33 94 aa2.21□□□□□ -2.06
NUP54-209ENST00000510569 ZNF431Q8TF32 576 aaPredicted RBP2.21□□□□□ -2.06
NUP54-209ENST00000510569 TSKUQ8WUA8 353 aa2.21□□□□□ -2.06
NUP54-209ENST00000510569 UBE2WQ96B02 151 aa2.21□□□□□ -2.06
NUP54-209ENST00000510569 SMDT1Q9H4I9 107 aa2.21□□□□□ -2.06
NUP54-209ENST00000510569 NHP2Q9NX24 153 aaKnown RBP2.21□□□□□ -2.06
NUP54-209ENST00000510569 RABAC1Q9UI14 185 aa2.21□□□□□ -2.06
NUP54-209ENST00000510569 SHANK1Q9Y566 2161 aa2.21□□□□□ -2.06
NUP54-209ENST00000510569 TMEM14AQ9Y6G1 99 aa2.21□□□□□ -2.06
NUP54-209ENST00000510569 LY96Q9Y6Y9 160 aa2.21□□□□□ -2.06
NUP54-209ENST00000510569 MYO7BQ6PIF6 2116 aa2.21□□□□□ -2.06
NUP54-209ENST00000510569 CACNA1AO00555 2505 aa2.21□□□□□ -2.06
NUP54-209ENST00000510569 SVILO95425 2214 aa2.21□□□□□ -2.06
NUP54-209ENST00000510569 CACNA1EQ15878 2313 aa2.2□□□□□ -2.06
NUP54-209ENST00000510569 THADAQ6YHU6 1953 aa2.2□□□□□ -2.06
NUP54-209ENST00000510569 TNRC6BQ9UPQ9 1833 aaKnown RBP2.2□□□□□ -2.06
NUP54-209ENST00000510569 RTTNQ86VV8 2226 aa2.2□□□□□ -2.06
NUP54-209ENST00000510569 ASXL3Q9C0F0 2248 aa2.2□□□□□ -2.06
NUP54-209ENST00000510569 IGHV3-15A0A0B4J1V0 119 aa2.2□□□□□ -2.06
NUP54-209ENST00000510569 TRBV7-7A0A0K0K1E9 115 aa2.2□□□□□ -2.06
NUP54-209ENST00000510569 CPSF4LA6NMK7 179 aaKnown RBP2.2□□□□□ -2.06
NUP54-209ENST00000510569 J3QLW9 94 aa2.2□□□□□ -2.06
NUP54-209ENST00000510569 CCL16O15467 120 aa2.2□□□□□ -2.06
NUP54-209ENST00000510569 TRGV3P03979 118 aa2.2□□□□□ -2.06
NUP54-209ENST00000510569 CD24P25063 80 aa2.2□□□□□ -2.06
NUP54-209ENST00000510569 CKS2P33552 79 aa2.2□□□□□ -2.06
NUP54-209ENST00000510569 XCL1P47992 114 aa2.2□□□□□ -2.06
NUP54-209ENST00000510569 SUPT4H1P63272 117 aaKnown RBP2.2□□□□□ -2.06
NUP54-209ENST00000510569 SEC11AP67812 179 aa2.2□□□□□ -2.06
NUP54-209ENST00000510569 C5orf38Q86SI9 138 aa2.2□□□□□ -2.06
NUP54-209ENST00000510569 TOMM5Q8N4H5 51 aa2.2□□□□□ -2.06
NUP54-209ENST00000510569 MUC7Q8TAX7 377 aa2.2□□□□□ -2.06
NUP54-209ENST00000510569 MYOZ3Q8TDC0 251 aa2.2□□□□□ -2.06
NUP54-209ENST00000510569 C10orf105Q8TEF2 133 aa2.2□□□□□ -2.06
NUP54-209ENST00000510569 SPTSSAQ969W0 71 aa2.2□□□□□ -2.06
NUP54-209ENST00000510569 CHCHD1Q96BP2 118 aaKnown RBP2.2□□□□□ -2.06
NUP54-209ENST00000510569 RETNLBQ9BQ08 111 aa2.2□□□□□ -2.06
NUP54-209ENST00000510569 DPH3P1Q9H4G8 78 aa2.2□□□□□ -2.06
NUP54-209ENST00000510569 HHLA3Q9XRX5 114 aa2.2□□□□□ -2.06
NUP54-209ENST00000510569 CHD3Q12873 2000 aaKnown RBP2.2□□□□□ -2.06
NUP54-209ENST00000510569 VPS13AQ96RL7 3174 aa2.2□□□□□ -2.06
NUP54-209ENST00000510569 DMDP11532 3685 aa2.2□□□□□ -2.06
NUP54-209ENST00000510569 DCHS1Q96JQ0 3298 aa2.2□□□□□ -2.06
NUP54-209ENST00000510569 KIAA1549Q9HCM3 1950 aa2.19□□□□□ -2.06
NUP54-209ENST00000510569 SPTBN4Q9H254 2564 aa2.19□□□□□ -2.06
NUP54-209ENST00000510569 PIEZO1Q92508 2521 aa2.19□□□□□ -2.06
NUP54-209ENST00000510569 IGKV3D-11A0A0A0MRZ8 115 aa2.19□□□□□ -2.06
NUP54-209ENST00000510569 C19orf71A6NCJ1 209 aa2.19□□□□□ -2.06
NUP54-209ENST00000510569 M0R233 179 aa2.19□□□□□ -2.06
NUP54-209ENST00000510569 COL8A2P25067 703 aa2.19□□□□□ -2.06
NUP54-209ENST00000510569 HMGN3Q15651 99 aa2.19□□□□□ -2.06
NUP54-209ENST00000510569 C2orf91Q6ZV80 131 aa2.19□□□□□ -2.06
NUP54-209ENST00000510569 LYZL2Q7Z4W2 148 aa2.19□□□□□ -2.06
NUP54-209ENST00000510569 MIR7-3HGQ8N6C7 128 aa2.19□□□□□ -2.06
NUP54-209ENST00000510569 Q8N8P6 123 aa2.19□□□□□ -2.06
NUP54-209ENST00000510569 Q8NDZ9 215 aa2.19□□□□□ -2.06
NUP54-209ENST00000510569 AQP3Q92482 292 aa2.19□□□□□ -2.06
NUP54-209ENST00000510569 TSLPQ969D9 159 aa2.19□□□□□ -2.06
NUP54-209ENST00000510569 S100A16Q96FQ6 103 aaKnown RBP2.19□□□□□ -2.06
NUP54-209ENST00000510569 NABP2Q9BQ15 211 aa2.19□□□□□ -2.06
NUP54-209ENST00000510569 PMCHL2Q9BQD1 86 aa2.19□□□□□ -2.06
NUP54-209ENST00000510569 ZNF355PQ9NSJ1 428 aa2.19□□□□□ -2.06
NUP54-209ENST00000510569 ICOSQ9Y6W8 199 aa2.19□□□□□ -2.06
NUP54-209ENST00000510569 ASCC3Q8N3C0 2202 aaKnown RBP2.19□□□□□ -2.06
NUP54-209ENST00000510569 SPEGQ15772 3267 aa2.19□□□□□ -2.06
NUP54-209ENST00000510569 IGHV3-73A0A0B4J1V6 119 aa2.18□□□□□ -2.06
NUP54-209ENST00000510569 A0A1W2PQD3 144 aa2.18□□□□□ -2.06
NUP54-209ENST00000510569 A6NIN4 97 aa2.18□□□□□ -2.06
NUP54-209ENST00000510569 H0YGG7 62 aa2.18□□□□□ -2.06
NUP54-209ENST00000510569 ATOX1O00244 68 aa2.18□□□□□ -2.06
NUP54-209ENST00000510569 GNRH2O43555 120 aa2.18□□□□□ -2.06
NUP54-209ENST00000510569 CREBL2O60519 120 aaPredicted RBP2.18□□□□□ -2.06
NUP54-209ENST00000510569 LHBP01229 141 aa2.18□□□□□ -2.06
NUP54-209ENST00000510569 IGLV3-1P01715 115 aa2.18□□□□□ -2.06
NUP54-209ENST00000510569 ADCYAP1P18509 176 aa2.18□□□□□ -2.06
NUP54-209ENST00000510569 MPV17P39210 176 aa2.18□□□□□ -2.06
NUP54-209ENST00000510569 RPL28P46779 137 aaKnown RBP2.18□□□□□ -2.06
NUP54-209ENST00000510569 ADIRFQ15847 76 aa2.18□□□□□ -2.06
NUP54-209ENST00000510569 Q6ZQT7 251 aa2.18□□□□□ -2.06
NUP54-209ENST00000510569 SLC25A26Q70HW3 274 aa2.18□□□□□ -2.06
NUP54-209ENST00000510569 TMEM105Q8N8V8 129 aa2.18□□□□□ -2.06
NUP54-209ENST00000510569 Q96M85 177 aa2.18□□□□□ -2.06
NUP54-209ENST00000510569 IMMP2LQ96T52 175 aa2.18□□□□□ -2.06
NUP54-209ENST00000510569 LINC00574Q9H8X3 128 aa2.18□□□□□ -2.06
NUP54-209ENST00000510569 ST20Q9HBF5 79 aa2.18□□□□□ -2.06
NUP54-209ENST00000510569 ITPR1Q14643 2758 aa2.17□□□□□ -2.06
NUP54-209ENST00000510569 CEP192Q8TEP8 1941 aa2.17□□□□□ -2.06
NUP54-209ENST00000510569 IGKV1OR2-108A0A075B7D4 117 aa2.17□□□□□ -2.06
NUP54-209ENST00000510569 IGLV3-32A0A0A0MS00 114 aa2.17□□□□□ -2.06
NUP54-209ENST00000510569 TRAV40A0A0B4J280 105 aa2.17□□□□□ -2.06
NUP54-209ENST00000510569 PIGBOS1A0A0B4J2F0 54 aa2.17□□□□□ -2.06
NUP54-209ENST00000510569 IGHV1-24A0A0C4DH33 117 aa2.17□□□□□ -2.06
NUP54-209ENST00000510569 hDV103S1A0JD37 113 aa2.17□□□□□ -2.06
NUP54-209ENST00000510569 TMEM235A6NFC5 223 aa2.17□□□□□ -2.06
NUP54-209ENST00000510569 TMEM14DPA8MWL7 114 aa2.17□□□□□ -2.06
NUP54-209ENST00000510569 C17orf112F2Z3M2 114 aa2.17□□□□□ -2.06
NUP54-209ENST00000510569 H3BRM9 83 aa2.17□□□□□ -2.06
NUP54-209ENST00000510569 K7EM74 188 aa2.17□□□□□ -2.06
NUP54-209ENST00000510569 IGKCP01834 107 aa2.17□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 86.4 ms