RNA–Protein interactions for RNA: ENST00000509092.5

PDGFRA-207, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 1 (best)

Gene PDGFRA, Length 2,417 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-207ENST00000509092 C16orf95Q9H693 158 aa7.38□□□□□ -1.23
PDGFRA-207ENST00000509092 NCOR2Q9Y618 2525 aa7.38□□□□□ -1.23
PDGFRA-207ENST00000509092 IGHV3OR16-13A0A075B7E8 117 aa7.37□□□□□ -1.23
PDGFRA-207ENST00000509092 A0A087WWL8 130 aa7.37□□□□□ -1.23
PDGFRA-207ENST00000509092 IGHV3-74A0A0B4J1X5 117 aa7.37□□□□□ -1.23
PDGFRA-207ENST00000509092 IGHG2P01859 326 aa7.37□□□□□ -1.23
PDGFRA-207ENST00000509092 C20orf173Q96LM9 149 aa7.37□□□□□ -1.23
PDGFRA-207ENST00000509092 LINC00846Q9NV44 126 aa7.37□□□□□ -1.23
PDGFRA-207ENST00000509092 EDN2P20800 178 aa7.37□□□□□ -1.23
PDGFRA-207ENST00000509092 RPL11P62913 178 aaKnown RBP7.37□□□□□ -1.23
PDGFRA-207ENST00000509092 APRG1Q8IVJ8 170 aa7.37□□□□□ -1.23
PDGFRA-207ENST00000509092 LY6G5BQ8NDX9 201 aa7.37□□□□□ -1.23
PDGFRA-207ENST00000509092 LINC00308Q8TCZ7 52 aa7.37□□□□□ -1.23
PDGFRA-207ENST00000509092 FAM218AQ96MZ4 157 aa7.37□□□□□ -1.23
PDGFRA-207ENST00000509092 IGF2RP11717 2491 aa7.36□□□□□ -1.23
PDGFRA-207ENST00000509092 CIRBPQ14011 172 aaKnown RBP7.36□□□□□ -1.23
PDGFRA-207ENST00000509092 COPS9Q8WXC6 57 aa7.36□□□□□ -1.23
PDGFRA-207ENST00000509092 CACNA1AO00555 2505 aa7.36□□□□□ -1.23
PDGFRA-207ENST00000509092 ZZEF1O43149 2961 aa7.36□□□□□ -1.23
PDGFRA-207ENST00000509092 CHD8Q9HCK8 2581 aa7.36□□□□□ -1.23
PDGFRA-207ENST00000509092 SMIM26A0A096LP01 95 aa7.36□□□□□ -1.23
PDGFRA-207ENST00000509092 RBMY1BA6NDE4 496 aaKnown RBP7.36□□□□□ -1.23
PDGFRA-207ENST00000509092 RBMY1EA6NEQ0 496 aaKnown RBP7.36□□□□□ -1.23
PDGFRA-207ENST00000509092 NDUFA1O15239 70 aa7.36□□□□□ -1.23
PDGFRA-207ENST00000509092 GHRHP01286 108 aa7.36□□□□□ -1.23
PDGFRA-207ENST00000509092 RBMY1DP0C7P1 496 aaKnown RBP7.36□□□□□ -1.23
PDGFRA-207ENST00000509092 RBMY1A1P0DJD3 496 aaKnown RBP7.36□□□□□ -1.23
PDGFRA-207ENST00000509092 RBMY1CP0DJD4 496 aa7.36□□□□□ -1.23
PDGFRA-207ENST00000509092 CD28P10747 220 aa7.36□□□□□ -1.23
PDGFRA-207ENST00000509092 RBMY1FQ15415 496 aaKnown RBP7.36□□□□□ -1.23
PDGFRA-207ENST00000509092 C1orf195Q5TG92 126 aa7.36□□□□□ -1.23
PDGFRA-207ENST00000509092 ANKRD11Q6UB99 2663 aaPredicted RBP7.36□□□□□ -1.23
PDGFRA-207ENST00000509092 MGAQ8IWI9 3026 aa7.36□□□□□ -1.23
PDGFRA-207ENST00000509092 IGHV3-49A0A0A0MS15 119 aa7.35□□□□□ -1.23
PDGFRA-207ENST00000509092 A8MZ25 164 aa7.35□□□□□ -1.23
PDGFRA-207ENST00000509092 M0QY20 66 aa7.35□□□□□ -1.23
PDGFRA-207ENST00000509092 U3KQE9 123 aa7.35□□□□□ -1.23
PDGFRA-207ENST00000509092 OBSCN-AS1Q96MR7 158 aa7.35□□□□□ -1.23
PDGFRA-207ENST00000509092 DSPP15924 2871 aaKnown RBP7.34□□□□□ -1.23
PDGFRA-207ENST00000509092 XCL1P47992 114 aa7.34□□□□□ -1.23
PDGFRA-207ENST00000509092 C15orf32Q32M92 178 aa7.34□□□□□ -1.23
PDGFRA-207ENST00000509092 FAM104AQ969W3 186 aa7.34□□□□□ -1.23
PDGFRA-207ENST00000509092 OVOL2Q9BRP0 275 aa7.34□□□□□ -1.23
PDGFRA-207ENST00000509092 C14orf132Q9NPU4 83 aa7.34□□□□□ -1.23
PDGFRA-207ENST00000509092 XCL2Q9UBD3 114 aa7.34□□□□□ -1.23
PDGFRA-207ENST00000509092 AVPP01185 164 aa7.33□□□□□ -1.24
PDGFRA-207ENST00000509092 ATP1A1-AS1Q5TC04 95 aa7.33□□□□□ -1.24
PDGFRA-207ENST00000509092 SEM1Q6ZVN7 128 aa7.33□□□□□ -1.24
PDGFRA-207ENST00000509092 C20orf197Q8N268 126 aa7.33□□□□□ -1.24
PDGFRA-207ENST00000509092 WFDC11Q8NEX6 87 aa7.33□□□□□ -1.24
PDGFRA-207ENST00000509092 Q9HAA7 133 aa7.33□□□□□ -1.24
PDGFRA-207ENST00000509092 KNCNA6PVL3 124 aa7.33□□□□□ -1.24
PDGFRA-207ENST00000509092 TRBV12-3P01733 135 aa7.33□□□□□ -1.24
PDGFRA-207ENST00000509092 FAM27E3Q08E93 113 aa7.33□□□□□ -1.24
PDGFRA-207ENST00000509092 DPM3Q9P2X0 92 aa7.33□□□□□ -1.24
PDGFRA-207ENST00000509092 H7BZZ5 65 aa7.32□□□□□ -1.24
PDGFRA-207ENST00000509092 FAM74A4Q5TZK3 123 aa7.32□□□□□ -1.24
PDGFRA-207ENST00000509092 FP248Q71RG6 208 aaPredicted RBP7.32□□□□□ -1.24
PDGFRA-207ENST00000509092 FAM110DQ8TAY7 271 aaPredicted RBP7.32□□□□□ -1.24
PDGFRA-207ENST00000509092 PRRC2CQ9Y520 2896 aaKnown RBP7.32□□□□□ -1.24
PDGFRA-207ENST00000509092 RPL28P46779 137 aaKnown RBP7.32□□□□□ -1.24
PDGFRA-207ENST00000509092 ATP5EP2Q5VTU8 51 aa7.32□□□□□ -1.24
PDGFRA-207ENST00000509092 PTPRQQ9UMZ3 2332 aa7.32□□□□□ -1.24
PDGFRA-207ENST00000509092 CCDC140Q96MF4 163 aa7.31□□□□□ -1.24
PDGFRA-207ENST00000509092 HILS1P60008 231 aa7.31□□□□□ -1.24
PDGFRA-207ENST00000509092 KLK9Q2XQG4 91 aa7.31□□□□□ -1.24
PDGFRA-207ENST00000509092 S100A7L2Q5SY68 101 aa7.31□□□□□ -1.24
PDGFRA-207ENST00000509092 C9orf129Q5T035 196 aaKnown RBP7.31□□□□□ -1.24
PDGFRA-207ENST00000509092 CLEC19AQ6UXS0 136 aa7.31□□□□□ -1.24
PDGFRA-207ENST00000509092 SOSTDC1Q6X4U4 206 aa7.31□□□□□ -1.24
PDGFRA-207ENST00000509092 KLK9Q9UKQ9 250 aa7.31□□□□□ -1.24
PDGFRA-207ENST00000509092 BOD1L1Q8NFC6 3051 aa7.31□□□□□ -1.24
PDGFRA-207ENST00000509092 MAP1BP46821 2468 aaKnown RBP7.3□□□□□ -1.24
PDGFRA-207ENST00000509092 C22orf34Q6ZV56 151 aa7.3□□□□□ -1.24
PDGFRA-207ENST00000509092 IGHV7-81A0A0B4J1V7 117 aa7.3□□□□□ -1.24
PDGFRA-207ENST00000509092 SOCS3O14543 225 aa7.3□□□□□ -1.24
PDGFRA-207ENST00000509092 HIST2H2BCQ6DN03 193 aa7.3□□□□□ -1.24
PDGFRA-207ENST00000509092 HIST2H2BDQ6DRA6 164 aa7.3□□□□□ -1.24
PDGFRA-207ENST00000509092 RNASE6Q93091 150 aaKnown RBP7.3□□□□□ -1.24
PDGFRA-207ENST00000509092 ATMQ13315 3056 aa7.3□□□□□ -1.24
PDGFRA-207ENST00000509092 KALRNO60229 2985 aa7.3□□□□□ -1.24
PDGFRA-207ENST00000509092 TPRP12270 2363 aaKnown RBP7.29□□□□□ -1.24
PDGFRA-207ENST00000509092 TRAV23DV6A0A075B6W5 121 aa7.29□□□□□ -1.24
PDGFRA-207ENST00000509092 DEFB1P60022 68 aa7.29□□□□□ -1.24
PDGFRA-207ENST00000509092 HOXD3P31249 432 aaPredicted RBP7.29□□□□□ -1.24
PDGFRA-207ENST00000509092 RNASE13Q5GAN3 156 aaKnown RBP7.29□□□□□ -1.24
PDGFRA-207ENST00000509092 Q8N6K4 173 aa7.29□□□□□ -1.24
PDGFRA-207ENST00000509092 BRK1Q8WUW1 75 aa7.29□□□□□ -1.24
PDGFRA-207ENST00000509092 PIEZO2Q9H5I5 2752 aa7.29□□□□□ -1.24
PDGFRA-207ENST00000509092 KLLNB2CW77 178 aa7.28□□□□□ -1.24
PDGFRA-207ENST00000509092 BCE1O60756 84 aa7.28□□□□□ -1.24
PDGFRA-207ENST00000509092 PF4P02776 101 aa7.28□□□□□ -1.24
PDGFRA-207ENST00000509092 LYPD5Q6UWN5 251 aa7.28□□□□□ -1.24
PDGFRA-207ENST00000509092 Q9H8V8 135 aa7.28□□□□□ -1.24
PDGFRA-207ENST00000509092 A0A0U1RQV1 116 aa7.28□□□□□ -1.24
PDGFRA-207ENST00000509092 DEFB109BQ30KR1 87 aa7.28□□□□□ -1.24
PDGFRA-207ENST00000509092 WNK2Q9Y3S1 2297 aa7.28□□□□□ -1.24
PDGFRA-207ENST00000509092 TRAV7A0A075B6U4 112 aa7.27□□□□□ -1.25
PDGFRA-207ENST00000509092 IGLV5-45A0A087WSX0 123 aa7.27□□□□□ -1.25
PDGFRA-207ENST00000509092 TRAV13-2A0A0B4J235 113 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms