RNA–Protein interactions for RNA: ENST00000508736.1

PRPF40B-203, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 1,861 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-203ENST00000508736 RBMY1BA6NDE4 496 aaKnown RBP8.44□□□□□ -1.06
PRPF40B-203ENST00000508736 RBMY1EA6NEQ0 496 aaKnown RBP8.44□□□□□ -1.06
PRPF40B-203ENST00000508736 INSP01308 110 aa8.44□□□□□ -1.06
PRPF40B-203ENST00000508736 RBMY1DP0C7P1 496 aaKnown RBP8.44□□□□□ -1.06
PRPF40B-203ENST00000508736 HTN1P15515 57 aa8.44□□□□□ -1.06
PRPF40B-203ENST00000508736 C12orf74Q32Q52 190 aa8.44□□□□□ -1.06
PRPF40B-203ENST00000508736 ODF3L2Q3SX64 289 aa8.44□□□□□ -1.06
PRPF40B-203ENST00000508736 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.44□□□□□ -1.06
PRPF40B-203ENST00000508736 C20orf203Q8NBC4 194 aa8.44□□□□□ -1.06
PRPF40B-203ENST00000508736 FAM110AQ9BQ89 295 aa8.44□□□□□ -1.06
PRPF40B-203ENST00000508736 RHODO00212 210 aa8.43□□□□□ -1.06
PRPF40B-203ENST00000508736 TMEM170BQ5T4T1 132 aa8.43□□□□□ -1.06
PRPF40B-203ENST00000508736 NFE4Q86UQ8 179 aa8.43□□□□□ -1.06
PRPF40B-203ENST00000508736 NDUFA11Q86Y39 141 aa8.43□□□□□ -1.06
PRPF40B-203ENST00000508736 ZNF479Q96JC4 524 aa8.43□□□□□ -1.06
PRPF40B-203ENST00000508736 A0A1B0GWB2 263 aa8.43□□□□□ -1.06
PRPF40B-203ENST00000508736 IGLL5B9A064 214 aa8.43□□□□□ -1.06
PRPF40B-203ENST00000508736 DEFB104AQ8WTQ1 72 aa8.43□□□□□ -1.06
PRPF40B-203ENST00000508736 SPXQ9BT56 116 aa8.43□□□□□ -1.06
PRPF40B-203ENST00000508736 TNFRSF18Q9Y5U5 241 aa8.43□□□□□ -1.06
PRPF40B-203ENST00000508736 ATRQ13535 2644 aa8.42□□□□□ -1.06
PRPF40B-203ENST00000508736 IGLV1-51P01701 117 aa8.42□□□□□ -1.06
PRPF40B-203ENST00000508736 EMP1P54849 157 aa8.42□□□□□ -1.06
PRPF40B-203ENST00000508736 SRSF9Q13242 221 aaKnown RBP eCLIP8.42□□□□□ -1.06
PRPF40B-203ENST00000508736 RNF151Q2KHN1 245 aa8.42□□□□□ -1.06
PRPF40B-203ENST00000508736 FBN1P35555 2871 aaKnown RBP8.41□□□□□ -1.06
PRPF40B-203ENST00000508736 KRTAP24-1Q3LI83 254 aa8.41□□□□□ -1.06
PRPF40B-203ENST00000508736 LINC01587Q99440 93 aa8.41□□□□□ -1.06
PRPF40B-203ENST00000508736 SAP30O75446 220 aa8.4□□□□□ -1.06
PRPF40B-203ENST00000508736 P0DMU3 169 aa8.4□□□□□ -1.06
PRPF40B-203ENST00000508736 FAM231AP0DMU4 169 aa8.4□□□□□ -1.06
PRPF40B-203ENST00000508736 FAM231CP0DMU5 169 aa8.4□□□□□ -1.06
PRPF40B-203ENST00000508736 LGALS3P17931 250 aaKnown RBP8.4□□□□□ -1.06
PRPF40B-203ENST00000508736 CRYBA4P53673 196 aa8.4□□□□□ -1.06
PRPF40B-203ENST00000508736 RRN3P1Q2M238 152 aa8.4□□□□□ -1.06
PRPF40B-203ENST00000508736 ZNRF2Q8NHG8 242 aa8.4□□□□□ -1.06
PRPF40B-203ENST00000508736 VCX2Q9H322 139 aa8.4□□□□□ -1.06
PRPF40B-203ENST00000508736 PYGO1Q9Y3Y4 419 aa8.4□□□□□ -1.06
PRPF40B-203ENST00000508736 NACAE9PAV3 2078 aa8.4□□□□□ -1.06
PRPF40B-203ENST00000508736 PLEKHB2Q96CS7 222 aa8.4□□□□□ -1.07
PRPF40B-203ENST00000508736 VPS25Q9BRG1 176 aa8.4□□□□□ -1.07
PRPF40B-203ENST00000508736 SPANXB1Q9NS25 103 aaPredicted RBP8.4□□□□□ -1.07
PRPF40B-203ENST00000508736 WNK1Q9H4A3 2382 aa8.39□□□□□ -1.07
PRPF40B-203ENST00000508736 IGLV4-3A0A075B6K6 122 aa8.39□□□□□ -1.07
PRPF40B-203ENST00000508736 IGHV3-73A0A0B4J1V6 119 aa8.39□□□□□ -1.07
PRPF40B-203ENST00000508736 J3QQQ9 107 aa8.39□□□□□ -1.07
PRPF40B-203ENST00000508736 STHQ8IWL8 128 aa8.39□□□□□ -1.07
PRPF40B-203ENST00000508736 DNAJC30Q96LL9 226 aa8.39□□□□□ -1.07
PRPF40B-203ENST00000508736 A0A0J9YY99 117 aa8.38□□□□□ -1.07
PRPF40B-203ENST00000508736 LEPROTO15243 131 aa8.38□□□□□ -1.07
PRPF40B-203ENST00000508736 KRTAP10-3P60369 221 aa8.38□□□□□ -1.07
PRPF40B-203ENST00000508736 BEAN1Q3B7T3 259 aa8.38□□□□□ -1.07
PRPF40B-203ENST00000508736 CFAP126Q5VTH2 177 aa8.38□□□□□ -1.07
PRPF40B-203ENST00000508736 TMEM223A0PJW6 202 aa8.38□□□□□ -1.07
PRPF40B-203ENST00000508736 C11orf72Q8NBR9 251 aa8.38□□□□□ -1.07
PRPF40B-203ENST00000508736 IGHV3-53P01767 116 aa8.37□□□□□ -1.07
PRPF40B-203ENST00000508736 OPRPNQ99935 248 aaPredicted RBP8.37□□□□□ -1.07
PRPF40B-203ENST00000508736 SPANXA1Q9NS26 97 aa8.37□□□□□ -1.07
PRPF40B-203ENST00000508736 MRPL16Q9NX20 251 aaKnown RBP8.37□□□□□ -1.07
PRPF40B-203ENST00000508736 F8W1H4 67 aa8.36□□□□□ -1.07
PRPF40B-203ENST00000508736 ZNF22P17026 224 aaPredicted RBP8.36□□□□□ -1.07
PRPF40B-203ENST00000508736 UBE2D1P51668 147 aa8.36□□□□□ -1.07
PRPF40B-203ENST00000508736 TSPEAR-AS2P59090 65 aa8.36□□□□□ -1.07
PRPF40B-203ENST00000508736 LYRM7Q5U5X0 104 aa8.36□□□□□ -1.07
PRPF40B-203ENST00000508736 LINC00482Q8N8I6 264 aa8.36□□□□□ -1.07
PRPF40B-203ENST00000508736 SLC25A29Q8N8R3 303 aa8.36□□□□□ -1.07
PRPF40B-203ENST00000508736 RS1O15537 224 aa8.36□□□□□ -1.07
PRPF40B-203ENST00000508736 AMELXQ99217 191 aa8.36□□□□□ -1.07
PRPF40B-203ENST00000508736 C19orf73Q9NVV2 129 aa8.36□□□□□ -1.07
PRPF40B-203ENST00000508736 PGPEP1Q9NXJ5 209 aa8.36□□□□□ -1.07
PRPF40B-203ENST00000508736 A0A0J9YXV3 536 aa8.35□□□□□ -1.07
PRPF40B-203ENST00000508736 PF4P02776 101 aa8.35□□□□□ -1.07
PRPF40B-203ENST00000508736 COTL1Q14019 142 aa8.35□□□□□ -1.07
PRPF40B-203ENST00000508736 XCL2Q9UBD3 114 aa8.35□□□□□ -1.07
PRPF40B-203ENST00000508736 TENM1Q9UKZ4 2725 aa8.35□□□□□ -1.07
PRPF40B-203ENST00000508736 MRPS36P82909 103 aaKnown RBP8.34□□□□□ -1.07
PRPF40B-203ENST00000508736 C1orf158Q8N1D5 194 aa8.34□□□□□ -1.07
PRPF40B-203ENST00000508736 TMEM238C9JI98 176 aa8.34□□□□□ -1.07
PRPF40B-203ENST00000508736 G3V4G9 280 aa8.34□□□□□ -1.07
PRPF40B-203ENST00000508736 IGHV3-30P01768 117 aa8.34□□□□□ -1.07
PRPF40B-203ENST00000508736 PRM2P04554 102 aa8.34□□□□□ -1.07
PRPF40B-203ENST00000508736 IGHV3-30-5P0DP03 117 aa8.34□□□□□ -1.07
PRPF40B-203ENST00000508736 PCP4P48539 62 aa8.34□□□□□ -1.07
PRPF40B-203ENST00000508736 INSL3P51460 131 aa8.34□□□□□ -1.07
PRPF40B-203ENST00000508736 TIMM21Q9BVV7 248 aa8.34□□□□□ -1.07
PRPF40B-203ENST00000508736 COL6A5A8TX70 2615 aa8.33□□□□□ -1.08
PRPF40B-203ENST00000508736 Q6ZSN1 163 aa8.33□□□□□ -1.08
PRPF40B-203ENST00000508736 IL17DQ8TAD2 202 aa8.33□□□□□ -1.08
PRPF40B-203ENST00000508736 CHCHD7Q9BUK0 85 aa8.33□□□□□ -1.08
PRPF40B-203ENST00000508736 C1QTNF4Q9BXJ3 329 aa8.33□□□□□ -1.08
PRPF40B-203ENST00000508736 RPL24P83731 157 aaKnown RBP8.32□□□□□ -1.08
PRPF40B-203ENST00000508736 GAGE13Q4V321 117 aa8.32□□□□□ -1.08
PRPF40B-203ENST00000508736 C3orf56Q8N813 242 aa8.32□□□□□ -1.08
PRPF40B-203ENST00000508736 MDFIQ99750 246 aa8.32□□□□□ -1.08
PRPF40B-203ENST00000508736 UBE2D4Q9Y2X8 147 aa8.32□□□□□ -1.08
PRPF40B-203ENST00000508736 IGHV3OR16-12A0A075B7B8 117 aa8.32□□□□□ -1.08
PRPF40B-203ENST00000508736 TINCRA0A1B0GVN0 87 aa8.32□□□□□ -1.08
PRPF40B-203ENST00000508736 H3BMG7 143 aa8.32□□□□□ -1.08
PRPF40B-203ENST00000508736 APOMO95445 188 aa8.32□□□□□ -1.08
PRPF40B-203ENST00000508736 TSPAN13O95857 204 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms