RNA–Protein interactions for RNA: ENST00000508438.1

SH3TC1-215, Transcript of SH3 domain and tetratricopeptide repeats 1, humanhuman

TSL 4

Gene SH3TC1, Length 515 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3TC1-215ENST00000508438 NTF3P20783 257 aa8.28□□□□□ -1.08
SH3TC1-215ENST00000508438 CNBPP62633 177 aaKnown RBP8.28□□□□□ -1.08
SH3TC1-215ENST00000508438 PGLYRP4Q96LB8 373 aa8.28□□□□□ -1.08
SH3TC1-215ENST00000508438 NIT2Q9NQR4 276 aa8.28□□□□□ -1.08
SH3TC1-215ENST00000508438 CTRLP40313 264 aa8.27□□□□□ -1.09
SH3TC1-215ENST00000508438 SERTAD4-AS1Q5TG53 156 aa8.27□□□□□ -1.09
SH3TC1-215ENST00000508438 WDR73Q6P4I2 378 aa8.27□□□□□ -1.09
SH3TC1-215ENST00000508438 C9orf62Q8N4C0 152 aa8.27□□□□□ -1.09
SH3TC1-215ENST00000508438 NUDT10Q8NFP7 164 aa8.27□□□□□ -1.09
SH3TC1-215ENST00000508438 NUDT11Q96G61 164 aa8.27□□□□□ -1.09
SH3TC1-215ENST00000508438 hDV102S1A0JD36 115 aa8.26□□□□□ -1.09
SH3TC1-215ENST00000508438 SLPIP03973 132 aa8.26□□□□□ -1.09
SH3TC1-215ENST00000508438 CIRBPQ14011 172 aaKnown RBP8.26□□□□□ -1.09
SH3TC1-215ENST00000508438 CNFNQ9BYD5 112 aa8.26□□□□□ -1.09
SH3TC1-215ENST00000508438 TAGLN2P37802 199 aaKnown RBP8.25□□□□□ -1.09
SH3TC1-215ENST00000508438 AMTP48728 403 aa8.25□□□□□ -1.09
SH3TC1-215ENST00000508438 hCG_2014768A0A024R1R8 64 aa8.24□□□□□ -1.09
SH3TC1-215ENST00000508438 K7EN84 100 aa8.24□□□□□ -1.09
SH3TC1-215ENST00000508438 UBE2L6O14933 153 aa8.24□□□□□ -1.09
SH3TC1-215ENST00000508438 COTL1Q14019 142 aa8.24□□□□□ -1.09
SH3TC1-215ENST00000508438 TWIST1Q15672 202 aa8.24□□□□□ -1.09
SH3TC1-215ENST00000508438 AKAP14Q86UN6 197 aa8.24□□□□□ -1.09
SH3TC1-215ENST00000508438 GATD1Q8NB37 220 aa8.24□□□□□ -1.09
SH3TC1-215ENST00000508438 RNASE7Q9H1E1 156 aaKnown RBP8.24□□□□□ -1.09
SH3TC1-215ENST00000508438 IGHV3-64A0A075B6Q5 118 aa8.23□□□□□ -1.09
SH3TC1-215ENST00000508438 TRAV26-2A0A0B4J265 109 aa8.23□□□□□ -1.09
SH3TC1-215ENST00000508438 OCC1Q8TAD7 63 aa8.23□□□□□ -1.09
SH3TC1-215ENST00000508438 RPP21Q9H633 154 aaKnown RBP8.23□□□□□ -1.09
SH3TC1-215ENST00000508438 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.22□□□□□ -1.09
SH3TC1-215ENST00000508438 CHTF8P0CG12 524 aa8.22□□□□□ -1.09
SH3TC1-215ENST00000508438 Q6ZNX1 250 aa8.22□□□□□ -1.09
SH3TC1-215ENST00000508438 C15orf56Q8N910 161 aa8.22□□□□□ -1.09
SH3TC1-215ENST00000508438 GTSF1Q8WW33 167 aa8.22□□□□□ -1.09
SH3TC1-215ENST00000508438 AP5S1Q9NUS5 200 aa8.22□□□□□ -1.09
SH3TC1-215ENST00000508438 A0A087WYN8 130 aa8.21□□□□□ -1.1
SH3TC1-215ENST00000508438 GAGE12HA6NDE8 117 aa8.21□□□□□ -1.1
SH3TC1-215ENST00000508438 CEBPGP53567 150 aa8.21□□□□□ -1.1
SH3TC1-215ENST00000508438 FOXA3P55318 350 aaPredicted RBP8.21□□□□□ -1.1
SH3TC1-215ENST00000508438 BLOC1S1P78537 153 aa8.21□□□□□ -1.1
SH3TC1-215ENST00000508438 ALKAL2Q6UX46 152 aa8.21□□□□□ -1.1
SH3TC1-215ENST00000508438 SPACA4Q8TDM5 124 aa8.21□□□□□ -1.1
SH3TC1-215ENST00000508438 RPL39LQ96EH5 51 aaKnown RBP8.21□□□□□ -1.1
SH3TC1-215ENST00000508438 IGKV3OR2-268A0A0C4DH90 116 aa8.2□□□□□ -1.1
SH3TC1-215ENST00000508438 SMIM15Q7Z3B0 74 aa8.2□□□□□ -1.1
SH3TC1-215ENST00000508438 RNF185Q96GF1 192 aa8.2□□□□□ -1.1
SH3TC1-215ENST00000508438 UBR4Q5T4S7 5183 aa8.2□□□□□ -1.1
SH3TC1-215ENST00000508438 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.19□□□□□ -1.1
SH3TC1-215ENST00000508438 IGKV2-29A2NJV5 120 aaPredicted RBP8.19□□□□□ -1.1
SH3TC1-215ENST00000508438 NCR2O95944 276 aa8.19□□□□□ -1.1
SH3TC1-215ENST00000508438 MT1HL1P0DM35 61 aa8.19□□□□□ -1.1
SH3TC1-215ENST00000508438 PLA2G2DQ9UNK4 145 aa8.19□□□□□ -1.1
SH3TC1-215ENST00000508438 TNXBP22105 4242 aa8.18□□□□□ -1.1
SH3TC1-215ENST00000508438 SDHAF1A6NFY7 115 aa8.18□□□□□ -1.1
SH3TC1-215ENST00000508438 TMEM250H0YL14 139 aa8.18□□□□□ -1.1
SH3TC1-215ENST00000508438 GATCO43716 136 aaKnown RBP8.18□□□□□ -1.1
SH3TC1-215ENST00000508438 HIGD2BQ4VC39 106 aa8.18□□□□□ -1.1
SH3TC1-215ENST00000508438 AMMECR1LQ6DCA0 310 aa8.18□□□□□ -1.1
SH3TC1-215ENST00000508438 CFAP161Q6P656 301 aa8.18□□□□□ -1.1
SH3TC1-215ENST00000508438 CHCHD10Q8WYQ3 142 aaPredicted RBP8.18□□□□□ -1.1
SH3TC1-215ENST00000508438 DPH3Q96FX2 82 aa8.18□□□□□ -1.1
SH3TC1-215ENST00000508438 PLAC8Q9NZF1 115 aa8.18□□□□□ -1.1
SH3TC1-215ENST00000508438 H7C423 109 aa8.17□□□□□ -1.1
SH3TC1-215ENST00000508438 APCSP02743 223 aa8.17□□□□□ -1.1
SH3TC1-215ENST00000508438 FGF6P10767 208 aa8.17□□□□□ -1.1
SH3TC1-215ENST00000508438 RPS10P46783 165 aaKnown RBP8.17□□□□□ -1.1
SH3TC1-215ENST00000508438 COX6A2Q02221 97 aa8.17□□□□□ -1.1
SH3TC1-215ENST00000508438 RNASEKQ6P5S7 137 aaKnown RBP8.17□□□□□ -1.1
SH3TC1-215ENST00000508438 TEX261Q6UWH6 196 aa8.17□□□□□ -1.1
SH3TC1-215ENST00000508438 Q6ZRU5 148 aa8.17□□□□□ -1.1
SH3TC1-215ENST00000508438 EIF5A2Q9GZV4 153 aaKnown RBP8.17□□□□□ -1.1
SH3TC1-215ENST00000508438 GVQW2A0A096LPI5 108 aaPredicted RBP8.16□□□□□ -1.1
SH3TC1-215ENST00000508438 FAM231BA6NCW3 169 aa8.16□□□□□ -1.1
SH3TC1-215ENST00000508438 A8MWL6 223 aa8.16□□□□□ -1.1
SH3TC1-215ENST00000508438 FAM231DQ6ZW35 169 aa8.16□□□□□ -1.1
SH3TC1-215ENST00000508438 PRSS3P2Q8NHM4 247 aa8.16□□□□□ -1.1
SH3TC1-215ENST00000508438 BORCS7Q96B45 105 aa8.16□□□□□ -1.1
SH3TC1-215ENST00000508438 TRBV6-5A0A0K0K1A5 114 aa8.15□□□□□ -1.1
SH3TC1-215ENST00000508438 I3L3M4 83 aa8.15□□□□□ -1.1
SH3TC1-215ENST00000508438 PHOX2AO14813 284 aa8.15□□□□□ -1.1
SH3TC1-215ENST00000508438 NDUFS6O75380 124 aaKnown RBP8.15□□□□□ -1.1
SH3TC1-215ENST00000508438 GAS8-AS1O95177 125 aa8.15□□□□□ -1.1
SH3TC1-215ENST00000508438 FOXI1Q12951 378 aa8.15□□□□□ -1.1
SH3TC1-215ENST00000508438 LYPD6BQ8NI32 183 aa8.15□□□□□ -1.1
SH3TC1-215ENST00000508438 SMIM7Q9BQ49 75 aa8.15□□□□□ -1.1
SH3TC1-215ENST00000508438 ESDP10768 282 aa8.14□□□□□ -1.11
SH3TC1-215ENST00000508438 ZNF25P17030 456 aaPredicted RBP8.14□□□□□ -1.11
SH3TC1-215ENST00000508438 PMCHP20382 165 aa8.14□□□□□ -1.11
SH3TC1-215ENST00000508438 CT83Q5H943 113 aa8.14□□□□□ -1.11
SH3TC1-215ENST00000508438 OR5A1Q8NGJ0 315 aa8.14□□□□□ -1.11
SH3TC1-215ENST00000508438 IGKV2-24A0A0C4DH68 120 aa8.13□□□□□ -1.11
SH3TC1-215ENST00000508438 TSHBP01222 138 aa8.13□□□□□ -1.11
SH3TC1-215ENST00000508438 MAJINQ3KP22 176 aa8.13□□□□□ -1.11
SH3TC1-215ENST00000508438 LINC00959A0A1B0GUT2 108 aa8.12□□□□□ -1.11
SH3TC1-215ENST00000508438 ZNF727A8MUV8 499 aa8.12□□□□□ -1.11
SH3TC1-215ENST00000508438 XCL1P47992 114 aa8.12□□□□□ -1.11
SH3TC1-215ENST00000508438 C7orf33Q8WU49 177 aa8.12□□□□□ -1.11
SH3TC1-215ENST00000508438 TMEM242Q9NWH2 141 aa8.12□□□□□ -1.11
SH3TC1-215ENST00000508438 A0A096LNI7 61 aa8.11□□□□□ -1.11
SH3TC1-215ENST00000508438 CCL25O15444 150 aa8.11□□□□□ -1.11
SH3TC1-215ENST00000508438 POLR2KP53803 58 aaKnown RBP8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms