RNA–Protein interactions for RNA: ENST00000508274.5

RAB28-205, Transcript of RAB28, member RAS oncogene family, humanhuman

TSL 1 (best)

Gene RAB28, Length 1,551 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28-205ENST00000508274 RPP21Q9H633 154 aaKnown RBP9.3□□□□□ -0.92
RAB28-205ENST00000508274 USP17L23D6RBM5 183 aa9.29□□□□□ -0.92
RAB28-205ENST00000508274 KRTAP26-1Q6PEX3 210 aa9.29□□□□□ -0.92
RAB28-205ENST00000508274 TWIST1Q15672 202 aa9.29□□□□□ -0.92
RAB28-205ENST00000508274 TEX261Q6UWH6 196 aa9.29□□□□□ -0.92
RAB28-205ENST00000508274 CNFNQ9BYD5 112 aa9.29□□□□□ -0.92
RAB28-205ENST00000508274 IGLV4-60A0A075B6I1 120 aa9.28□□□□□ -0.92
RAB28-205ENST00000508274 TRAV26-2A0A0B4J265 109 aa9.28□□□□□ -0.92
RAB28-205ENST00000508274 C14orf177Q52M58 125 aa9.28□□□□□ -0.92
RAB28-205ENST00000508274 C20orf203Q8NBC4 194 aa9.28□□□□□ -0.92
RAB28-205ENST00000508274 GTSF1Q8WW33 167 aa9.28□□□□□ -0.92
RAB28-205ENST00000508274 NIT2Q9NQR4 276 aa9.28□□□□□ -0.92
RAB28-205ENST00000508274 WDR73Q6P4I2 378 aa9.27□□□□□ -0.93
RAB28-205ENST00000508274 TMEM243Q9BU79 118 aa9.27□□□□□ -0.93
RAB28-205ENST00000508274 GFRA4Q9GZZ7 299 aa9.27□□□□□ -0.93
RAB28-205ENST00000508274 IGLV10-54A0A075B6I4 117 aa9.26□□□□□ -0.93
RAB28-205ENST00000508274 PRSS1P07477 247 aa9.26□□□□□ -0.93
RAB28-205ENST00000508274 CEBPGP53567 150 aa9.26□□□□□ -0.93
RAB28-205ENST00000508274 FOXA3P55318 350 aaPredicted RBP9.26□□□□□ -0.93
RAB28-205ENST00000508274 BLOC1S1P78537 153 aa9.26□□□□□ -0.93
RAB28-205ENST00000508274 REG3AQ06141 175 aa9.26□□□□□ -0.93
RAB28-205ENST00000508274 GATD1Q8NB37 220 aa9.26□□□□□ -0.93
RAB28-205ENST00000508274 LYPD6BQ8NI32 183 aa9.26□□□□□ -0.93
RAB28-205ENST00000508274 CIRBP-AS1Q8TBR5 109 aa9.26□□□□□ -0.93
RAB28-205ENST00000508274 PGLYRP4Q96LB8 373 aa9.26□□□□□ -0.93
RAB28-205ENST00000508274 CHAC1Q9BUX1 264 aa9.26□□□□□ -0.93
RAB28-205ENST00000508274 TMEM250H0YL14 139 aa9.25□□□□□ -0.93
RAB28-205ENST00000508274 PLA2G1BP04054 148 aaKnown RBP9.24□□□□□ -0.93
RAB28-205ENST00000508274 RPL39LQ96EH5 51 aaKnown RBP9.24□□□□□ -0.93
RAB28-205ENST00000508274 A0A1B0GUV1 79 aa9.24□□□□□ -0.93
RAB28-205ENST00000508274 GATCO43716 136 aaKnown RBP9.24□□□□□ -0.93
RAB28-205ENST00000508274 AMTP48728 403 aa9.24□□□□□ -0.93
RAB28-205ENST00000508274 COTL1Q14019 142 aa9.24□□□□□ -0.93
RAB28-205ENST00000508274 LINC00862A6NCI5 91 aa9.23□□□□□ -0.93
RAB28-205ENST00000508274 UBE2L6O14933 153 aa9.23□□□□□ -0.93
RAB28-205ENST00000508274 CLLU1Q5K131 121 aa9.23□□□□□ -0.93
RAB28-205ENST00000508274 FAM231DQ6ZW35 169 aa9.22□□□□□ -0.93
RAB28-205ENST00000508274 KRTAP10-4P60372 401 aaPredicted RBP9.21□□□□□ -0.93
RAB28-205ENST00000508274 SMIM7Q9BQ49 75 aa9.21□□□□□ -0.93
RAB28-205ENST00000508274 EIF5A2Q9GZV4 153 aaKnown RBP9.21□□□□□ -0.93
RAB28-205ENST00000508274 A8MWL6 223 aa9.2□□□□□ -0.94
RAB28-205ENST00000508274 C9orf163Q8N9P6 203 aa9.2□□□□□ -0.94
RAB28-205ENST00000508274 TRAV8-4A0A0B4J246 113 aa9.2□□□□□ -0.94
RAB28-205ENST00000508274 PANO1I0J062 215 aa9.2□□□□□ -0.94
RAB28-205ENST00000508274 GAS8-AS1O95177 125 aa9.2□□□□□ -0.94
RAB28-205ENST00000508274 DGAT2L7PQ6IED9 249 aa9.2□□□□□ -0.94
RAB28-205ENST00000508274 SMIM15Q7Z3B0 74 aa9.2□□□□□ -0.94
RAB28-205ENST00000508274 LINC01551Q86U37 167 aa9.2□□□□□ -0.94
RAB28-205ENST00000508274 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.2□□□□□ -0.94
RAB28-205ENST00000508274 LRP1Q07954 4544 aaKnown RBP9.19□□□□□ -0.94
RAB28-205ENST00000508274 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.19□□□□□ -0.94
RAB28-205ENST00000508274 IGKV3OR2-268A0A0C4DH90 116 aa9.19□□□□□ -0.94
RAB28-205ENST00000508274 IGKV2-29A2NJV5 120 aaPredicted RBP9.19□□□□□ -0.94
RAB28-205ENST00000508274 CT83Q5H943 113 aa9.19□□□□□ -0.94
RAB28-205ENST00000508274 hDV102S1A0JD36 115 aa9.18□□□□□ -0.94
RAB28-205ENST00000508274 SDHAF1A6NFY7 115 aa9.18□□□□□ -0.94
RAB28-205ENST00000508274 ZNF727A8MUV8 499 aa9.18□□□□□ -0.94
RAB28-205ENST00000508274 SRP19P09132 144 aaKnown RBP9.18□□□□□ -0.94
RAB28-205ENST00000508274 HIGD1CA8MV81 97 aa9.17□□□□□ -0.94
RAB28-205ENST00000508274 RAB14P61106 215 aa9.17□□□□□ -0.94
RAB28-205ENST00000508274 CLRN3Q8NCR9 226 aa9.17□□□□□ -0.94
RAB28-205ENST00000508274 NCR2O95944 276 aa9.16□□□□□ -0.94
RAB28-205ENST00000508274 APCSP02743 223 aa9.16□□□□□ -0.94
RAB28-205ENST00000508274 SLPIP03973 132 aa9.16□□□□□ -0.94
RAB28-205ENST00000508274 RNASEKQ6P5S7 137 aaKnown RBP9.16□□□□□ -0.94
RAB28-205ENST00000508274 SDIM1Q6ZPB5 146 aa9.16□□□□□ -0.94
RAB28-205ENST00000508274 TSKUQ8WUA8 353 aa9.16□□□□□ -0.94
RAB28-205ENST00000508274 GAGE12HA6NDE8 117 aa9.16□□□□□ -0.94
RAB28-205ENST00000508274 CNBPP62633 177 aaKnown RBP9.16□□□□□ -0.94
RAB28-205ENST00000508274 AMMECR1LQ6DCA0 310 aa9.16□□□□□ -0.94
RAB28-205ENST00000508274 C15orf56Q8N910 161 aa9.16□□□□□ -0.94
RAB28-205ENST00000508274 BORCS7Q96B45 105 aa9.16□□□□□ -0.94
RAB28-205ENST00000508274 A0A1B0GUT8 65 aa9.15□□□□□ -0.95
RAB28-205ENST00000508274 FAM231BA6NCW3 169 aa9.15□□□□□ -0.95
RAB28-205ENST00000508274 NDUFS6O75380 124 aaKnown RBP9.15□□□□□ -0.95
RAB28-205ENST00000508274 FGF6P10767 208 aa9.15□□□□□ -0.95
RAB28-205ENST00000508274 RPS10P46783 165 aaKnown RBP9.15□□□□□ -0.95
RAB28-205ENST00000508274 RNF185Q96GF1 192 aa9.15□□□□□ -0.95
RAB28-205ENST00000508274 OSTCQ9NRP0 149 aa9.15□□□□□ -0.95
RAB28-205ENST00000508274 FAT3Q8TDW7 4589 aa9.14□□□□□ -0.95
RAB28-205ENST00000508274 TRBV6-5A0A0K0K1A5 114 aa9.14□□□□□ -0.95
RAB28-205ENST00000508274 PMCHP20382 165 aa9.14□□□□□ -0.95
RAB28-205ENST00000508274 TMEM191AQ9H0A3 160 aa9.14□□□□□ -0.95
RAB28-205ENST00000508274 TMEM242Q9NWH2 141 aa9.14□□□□□ -0.95
RAB28-205ENST00000508274 V9GYV3 84 aa9.14□□□□□ -0.95
RAB28-205ENST00000508274 KRTAP29-1A8MX34 341 aaPredicted RBP9.13□□□□□ -0.95
RAB28-205ENST00000508274 I3L3M4 83 aa9.13□□□□□ -0.95
RAB28-205ENST00000508274 TSHBP01222 138 aa9.13□□□□□ -0.95
RAB28-205ENST00000508274 RAB4AP20338 218 aa9.13□□□□□ -0.95
RAB28-205ENST00000508274 COMMD7Q86VX2 200 aa9.13□□□□□ -0.95
RAB28-205ENST00000508274 AMN1Q8IY45 258 aa9.13□□□□□ -0.95
RAB28-205ENST00000508274 CHCHD10Q8WYQ3 142 aaPredicted RBP9.13□□□□□ -0.95
RAB28-205ENST00000508274 AP5S1Q9NUS5 200 aa9.13□□□□□ -0.95
RAB28-205ENST00000508274 PKHD1L1Q86WI1 4243 aa9.13□□□□□ -0.95
RAB28-205ENST00000508274 C9JQL5 133 aa9.12□□□□□ -0.95
RAB28-205ENST00000508274 H7C423 109 aa9.12□□□□□ -0.95
RAB28-205ENST00000508274 CHTF8P0CG12 524 aa9.12□□□□□ -0.95
RAB28-205ENST00000508274 RPL37AP61513 92 aaKnown RBP9.12□□□□□ -0.95
RAB28-205ENST00000508274 HIGD2BQ4VC39 106 aa9.12□□□□□ -0.95
RAB28-205ENST00000508274 ISOC2Q96AB3 205 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms