RNA–Protein interactions for RNA: ENST00000508238.5

UBE2D3-222, Transcript of ubiquitin conjugating enzyme E2 D3, human

TSL 4

Gene UBE2D3, Length 547 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBE2D3-222	ENST00000508238	TMEM262	E9PQX1	116 aa		5.24	□□□□□ -1.57
UBE2D3-222	ENST00000508238	ZNF56	Q15929	161 aa		5.24	□□□□□ -1.57
UBE2D3-222	ENST00000508238	C9orf62	Q8N4C0	152 aa		5.24	□□□□□ -1.57
UBE2D3-222	ENST00000508238		Q8N976	141 aa		5.24	□□□□□ -1.57
UBE2D3-222	ENST00000508238	BORCS7	Q96B45	105 aa		5.24	□□□□□ -1.57
UBE2D3-222	ENST00000508238	EIF5A2	Q9GZV4	153 aa	Known RBP	5.24	□□□□□ -1.57
UBE2D3-222	ENST00000508238	KLK12	Q9UKR0	248 aa		5.24	□□□□□ -1.57
UBE2D3-222	ENST00000508238	TRBV20OR9-2	A0A075B6H5	130 aa		5.23	□□□□□ -1.57
UBE2D3-222	ENST00000508238	MUC21	A0A0G2JKD1	596 aa		5.23	□□□□□ -1.57
UBE2D3-222	ENST00000508238	MUC21	A0A140T8X8	626 aa		5.23	□□□□□ -1.57
UBE2D3-222	ENST00000508238	RAB19	A4D1S5	217 aa		5.23	□□□□□ -1.57
UBE2D3-222	ENST00000508238		A8MWL6	223 aa		5.23	□□□□□ -1.57
UBE2D3-222	ENST00000508238		M0QY20	66 aa		5.23	□□□□□ -1.57
UBE2D3-222	ENST00000508238		Q6ZSA8	131 aa		5.23	□□□□□ -1.57
UBE2D3-222	ENST00000508238	TPPP3	Q9BW30	176 aa		5.23	□□□□□ -1.57
UBE2D3-222	ENST00000508238	SMDT1	Q9H4I9	107 aa		5.23	□□□□□ -1.57
UBE2D3-222	ENST00000508238	GZMB	P10144	247 aa		5.22	□□□□□ -1.57
UBE2D3-222	ENST00000508238	FAM74A3	Q4VXF1	159 aa		5.22	□□□□□ -1.57
UBE2D3-222	ENST00000508238		Q5VSD8	79 aa		5.22	□□□□□ -1.57
UBE2D3-222	ENST00000508238	ALKAL2	Q6UX46	152 aa		5.22	□□□□□ -1.57
UBE2D3-222	ENST00000508238	NTM-AS1	Q6ZSK4	140 aa		5.22	□□□□□ -1.57
UBE2D3-222	ENST00000508238	LYPD6B	Q8NI32	183 aa		5.22	□□□□□ -1.57
UBE2D3-222	ENST00000508238	BAALC	Q8WXS3	180 aa		5.22	□□□□□ -1.57
UBE2D3-222	ENST00000508238	UBE2W	Q96B02	151 aa		5.22	□□□□□ -1.57
UBE2D3-222	ENST00000508238	CNFN	Q9BYD5	112 aa		5.22	□□□□□ -1.57
UBE2D3-222	ENST00000508238	VPS13B	Q7Z7G8	4022 aa		5.21	□□□□□ -1.58
UBE2D3-222	ENST00000508238	TRBV25-1	A0A075B6N4	114 aa		5.21	□□□□□ -1.58
UBE2D3-222	ENST00000508238	IGKV2D-24	A0A075B6R9	120 aa		5.21	□□□□□ -1.58
UBE2D3-222	ENST00000508238	FAM231B	A6NCW3	169 aa		5.21	□□□□□ -1.58
UBE2D3-222	ENST00000508238	INAFM2	P0DMQ5	153 aa		5.21	□□□□□ -1.58
UBE2D3-222	ENST00000508238	NTF3	P20783	257 aa		5.21	□□□□□ -1.58
UBE2D3-222	ENST00000508238	SST	P61278	116 aa		5.21	□□□□□ -1.58
UBE2D3-222	ENST00000508238	TWIST1	Q15672	202 aa		5.21	□□□□□ -1.58
UBE2D3-222	ENST00000508238	IQCJ	Q1A5X6	159 aa		5.21	□□□□□ -1.58
UBE2D3-222	ENST00000508238	C14orf177	Q52M58	125 aa		5.21	□□□□□ -1.58
UBE2D3-222	ENST00000508238	MPV17L2	Q567V2	206 aa		5.21	□□□□□ -1.58
UBE2D3-222	ENST00000508238	ENHO	Q6UWT2	76 aa		5.21	□□□□□ -1.58
UBE2D3-222	ENST00000508238	FAM231D	Q6ZW35	169 aa		5.21	□□□□□ -1.58
UBE2D3-222	ENST00000508238	C15orf54	Q8N8G6	183 aa		5.21	□□□□□ -1.58
UBE2D3-222	ENST00000508238	OCC1	Q8TAD7	63 aa		5.21	□□□□□ -1.58
UBE2D3-222	ENST00000508238	DPH3P1	Q9H4G8	78 aa		5.21	□□□□□ -1.58
UBE2D3-222	ENST00000508238	RPP21	Q9H633	154 aa	Known RBP	5.21	□□□□□ -1.58
UBE2D3-222	ENST00000508238	NIT2	Q9NQR4	276 aa		5.21	□□□□□ -1.58
UBE2D3-222	ENST00000508238	PRR34	Q9NV39	138 aa		5.21	□□□□□ -1.58
UBE2D3-222	ENST00000508238	LECT2	O14960	151 aa		5.2	□□□□□ -1.58
UBE2D3-222	ENST00000508238	GATC	O43716	136 aa	Known RBP	5.2	□□□□□ -1.58
UBE2D3-222	ENST00000508238	PPP1R17	O96001	155 aa		5.2	□□□□□ -1.58
UBE2D3-222	ENST00000508238	CRP	P02741	224 aa		5.2	□□□□□ -1.58
UBE2D3-222	ENST00000508238	SMR3B	P02814	79 aa	Predicted RBP	5.2	□□□□□ -1.58
UBE2D3-222	ENST00000508238	CTRL	P40313	264 aa		5.2	□□□□□ -1.58
UBE2D3-222	ENST00000508238	FOXA3	P55318	350 aa	Predicted RBP	5.2	□□□□□ -1.58
UBE2D3-222	ENST00000508238	PEA15	Q15121	130 aa		5.2	□□□□□ -1.58
UBE2D3-222	ENST00000508238	MIA	Q16674	131 aa		5.2	□□□□□ -1.58
UBE2D3-222	ENST00000508238	SUMO4	Q6EEV6	95 aa		5.2	□□□□□ -1.58
UBE2D3-222	ENST00000508238	RASL11A	Q6T310	242 aa		5.2	□□□□□ -1.58
UBE2D3-222	ENST00000508238	LYZL1	Q6UWQ5	148 aa		5.2	□□□□□ -1.58
UBE2D3-222	ENST00000508238	CHCHD5	Q9BSY4	110 aa		5.2	□□□□□ -1.58
UBE2D3-222	ENST00000508238	GFRA4	Q9GZZ7	299 aa		5.2	□□□□□ -1.58
UBE2D3-222	ENST00000508238	DNAH8	Q96JB1	4490 aa		5.2	□□□□□ -1.58
UBE2D3-222	ENST00000508238	IGHV1-24	A0A0C4DH33	117 aa		5.19	□□□□□ -1.58
UBE2D3-222	ENST00000508238		A0A1B0GUV1	79 aa		5.19	□□□□□ -1.58
UBE2D3-222	ENST00000508238	ZNF727	A8MUV8	499 aa		5.19	□□□□□ -1.58
UBE2D3-222	ENST00000508238	UBE2L6	O14933	153 aa		5.19	□□□□□ -1.58
UBE2D3-222	ENST00000508238	ANG	P03950	147 aa	Known RBP	5.19	□□□□□ -1.58
UBE2D3-222	ENST00000508238	MGP	P08493	103 aa		5.19	□□□□□ -1.58
UBE2D3-222	ENST00000508238	CEBPG	P53567	150 aa		5.19	□□□□□ -1.58
UBE2D3-222	ENST00000508238	RBX1	P62877	108 aa		5.19	□□□□□ -1.58
UBE2D3-222	ENST00000508238	TMEM241	Q24JQ0	296 aa		5.19	□□□□□ -1.58
UBE2D3-222	ENST00000508238	KRTAP15-1	Q3LI76	137 aa		5.19	□□□□□ -1.58
UBE2D3-222	ENST00000508238	SMIM7	Q9BQ49	75 aa		5.19	□□□□□ -1.58
UBE2D3-222	ENST00000508238	KRTAP9-8	Q9BYQ0	159 aa		5.19	□□□□□ -1.58
UBE2D3-222	ENST00000508238	IGLV2-33	A0A075B6J2	118 aa	Predicted RBP	5.18	□□□□□ -1.58
UBE2D3-222	ENST00000508238	TRAV8-4	A0A0B4J246	113 aa		5.18	□□□□□ -1.58
UBE2D3-222	ENST00000508238		K7EN84	100 aa		5.18	□□□□□ -1.58
UBE2D3-222	ENST00000508238	RAB14	P61106	215 aa		5.18	□□□□□ -1.58
UBE2D3-222	ENST00000508238	HAMP	P81172	84 aa		5.18	□□□□□ -1.58
UBE2D3-222	ENST00000508238	SMAGP	Q0VAQ4	97 aa		5.18	□□□□□ -1.58
UBE2D3-222	ENST00000508238	KRTAP26-1	Q6PEX3	210 aa		5.18	□□□□□ -1.58
UBE2D3-222	ENST00000508238	PGLYRP4	Q96LB8	373 aa		5.18	□□□□□ -1.58
UBE2D3-222	ENST00000508238	OSTC	Q9NRP0	149 aa		5.18	□□□□□ -1.58
UBE2D3-222	ENST00000508238	MYCBP2	O75592	4640 aa		5.18	□□□□□ -1.58
UBE2D3-222	ENST00000508238		H7C423	109 aa		5.17	□□□□□ -1.58
UBE2D3-222	ENST00000508238	NCR2	O95944	276 aa		5.17	□□□□□ -1.58
UBE2D3-222	ENST00000508238	NKX2-5	P52952	324 aa	Predicted RBP	5.17	□□□□□ -1.58
UBE2D3-222	ENST00000508238	RIG	Q13278	110 aa		5.17	□□□□□ -1.58
UBE2D3-222	ENST00000508238	COTL1	Q14019	142 aa		5.17	□□□□□ -1.58
UBE2D3-222	ENST00000508238	DGAT2L7P	Q6IED9	249 aa		5.17	□□□□□ -1.58
UBE2D3-222	ENST00000508238	LINC00269	Q8N2A0	174 aa		5.17	□□□□□ -1.58
UBE2D3-222	ENST00000508238	TSKU	Q8WUA8	353 aa		5.17	□□□□□ -1.58
UBE2D3-222	ENST00000508238	GTSF1	Q8WW33	167 aa		5.17	□□□□□ -1.58
UBE2D3-222	ENST00000508238	CHAC1	Q9BUX1	264 aa		5.17	□□□□□ -1.58
UBE2D3-222	ENST00000508238	RNASE7	Q9H1E1	156 aa	Known RBP	5.17	□□□□□ -1.58
UBE2D3-222	ENST00000508238	HERC1	Q15751	4861 aa		5.16	□□□□□ -1.58
UBE2D3-222	ENST00000508238		A0A1B0GUT8	65 aa		5.16	□□□□□ -1.58
UBE2D3-222	ENST00000508238	USP17L23	D6RBM5	183 aa		5.16	□□□□□ -1.58
UBE2D3-222	ENST00000508238	S100A8	P05109	93 aa		5.16	□□□□□ -1.58
UBE2D3-222	ENST00000508238	REG3A	Q06141	175 aa		5.16	□□□□□ -1.58
UBE2D3-222	ENST00000508238	GAGE6	Q13070	117 aa		5.16	□□□□□ -1.58
UBE2D3-222	ENST00000508238	LINC01620	Q4KN68	170 aa		5.16	□□□□□ -1.58
UBE2D3-222	ENST00000508238	SCX	Q7RTU7	201 aa		5.16	□□□□□ -1.58

Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms