RNA–Protein interactions for RNA: ENST00000508216.5

PDLIM5-210, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 1,794 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-210ENST00000508216 LINC00167Q96N53 147 aa7.74□□□□□ -1.17
PDLIM5-210ENST00000508216 ARHGAP32A7KAX9 2087 aa7.74□□□□□ -1.17
PDLIM5-210ENST00000508216 ESM1Q9NQ30 184 aa7.74□□□□□ -1.17
PDLIM5-210ENST00000508216 BDP1A6H8Y1 2624 aa7.73□□□□□ -1.17
PDLIM5-210ENST00000508216 HCP5Q6MZN7 132 aa7.73□□□□□ -1.17
PDLIM5-210ENST00000508216 CYP4F30PQ9H0H9 118 aa7.73□□□□□ -1.17
PDLIM5-210ENST00000508216 LENEPQ9Y5L5 61 aa7.73□□□□□ -1.17
PDLIM5-210ENST00000508216 BUB1B-PAK6H3BSN5 160 aa7.72□□□□□ -1.17
PDLIM5-210ENST00000508216 C9orf129Q5T035 196 aaKnown RBP7.72□□□□□ -1.17
PDLIM5-210ENST00000508216 LINC00269Q8N2A0 174 aa7.72□□□□□ -1.17
PDLIM5-210ENST00000508216 Q8TAT8 98 aa7.72□□□□□ -1.17
PDLIM5-210ENST00000508216 CXXC4Q9H2H0 198 aa7.72□□□□□ -1.17
PDLIM5-210ENST00000508216 C11orf21Q9P2W6 132 aa7.72□□□□□ -1.17
PDLIM5-210ENST00000508216 DEC1Q9P2X7 70 aa7.72□□□□□ -1.17
PDLIM5-210ENST00000508216 IGLV3-12A0A075B6K2 115 aa7.71□□□□□ -1.17
PDLIM5-210ENST00000508216 I3L2K1 104 aa7.71□□□□□ -1.17
PDLIM5-210ENST00000508216 IGLV2-23P01705 113 aa7.71□□□□□ -1.17
PDLIM5-210ENST00000508216 NREPQ16612 68 aa7.71□□□□□ -1.17
PDLIM5-210ENST00000508216 NKAPP1Q8N9T2 125 aa7.71□□□□□ -1.17
PDLIM5-210ENST00000508216 KIF25-AS1Q9Y6Z4 181 aa7.71□□□□□ -1.17
PDLIM5-210ENST00000508216 TRAV10A0A0B4J240 114 aa7.71□□□□□ -1.18
PDLIM5-210ENST00000508216 IGHV3-48P01763 117 aa7.71□□□□□ -1.18
PDLIM5-210ENST00000508216 CXCL17Q6UXB2 119 aa7.71□□□□□ -1.18
PDLIM5-210ENST00000508216 CCL17Q92583 94 aa7.71□□□□□ -1.18
PDLIM5-210ENST00000508216 ARFGEF3Q5TH69 2177 aa7.71□□□□□ -1.18
PDLIM5-210ENST00000508216 C16orf90A8MZG2 172 aa7.7□□□□□ -1.18
PDLIM5-210ENST00000508216 RPL39P62891 51 aaKnown RBP7.7□□□□□ -1.18
PDLIM5-210ENST00000508216 Q9HAA7 133 aa7.7□□□□□ -1.18
PDLIM5-210ENST00000508216 A0A0J9YXV3 536 aa7.69□□□□□ -1.18
PDLIM5-210ENST00000508216 LOC100996750A0A140TA64 210 aa7.69□□□□□ -1.18
PDLIM5-210ENST00000508216 MRGPRG-AS1Q2M3A8 158 aa7.69□□□□□ -1.18
PDLIM5-210ENST00000508216 GGNQ86UU5 652 aa7.69□□□□□ -1.18
PDLIM5-210ENST00000508216 WFDC9Q8NEX5 89 aa7.69□□□□□ -1.18
PDLIM5-210ENST00000508216 KRTAP4-6Q9BYQ5 205 aa7.69□□□□□ -1.18
PDLIM5-210ENST00000508216 ORMDL1Q9P0S3 153 aa7.69□□□□□ -1.18
PDLIM5-210ENST00000508216 IGLV4-3A0A075B6K6 122 aa7.69□□□□□ -1.18
PDLIM5-210ENST00000508216 LINC01547P58512 204 aaPredicted RBP7.69□□□□□ -1.18
PDLIM5-210ENST00000508216 B3GALT5-AS1P59052 145 aa7.69□□□□□ -1.18
PDLIM5-210ENST00000508216 Q5VV11 94 aa7.69□□□□□ -1.18
PDLIM5-210ENST00000508216 MIR7-3HGQ8N6C7 128 aa7.69□□□□□ -1.18
PDLIM5-210ENST00000508216 C20orf203Q8NBC4 194 aa7.69□□□□□ -1.18
PDLIM5-210ENST00000508216 PATE1Q8WXA2 126 aa7.69□□□□□ -1.18
PDLIM5-210ENST00000508216 NCOR1O75376 2440 aa7.69□□□□□ -1.18
PDLIM5-210ENST00000508216 MALRD1Q5VYJ5 2156 aa7.68□□□□□ -1.18
PDLIM5-210ENST00000508216 IGLV5-45A0A087WSX0 123 aa7.68□□□□□ -1.18
PDLIM5-210ENST00000508216 GNRH2O43555 120 aa7.68□□□□□ -1.18
PDLIM5-210ENST00000508216 LINC00315P59091 139 aa7.68□□□□□ -1.18
PDLIM5-210ENST00000508216 KIAA0087Q14695 138 aa7.68□□□□□ -1.18
PDLIM5-210ENST00000508216 Q9H8V8 135 aa7.68□□□□□ -1.18
PDLIM5-210ENST00000508216 ZNF503-AS2A6NEH8 195 aa7.67□□□□□ -1.18
PDLIM5-210ENST00000508216 PI4KAP42356 2102 aa7.67□□□□□ -1.18
PDLIM5-210ENST00000508216 RPL27AP46776 148 aaKnown RBP7.67□□□□□ -1.18
PDLIM5-210ENST00000508216 C10orf55Q5SWW7 151 aa7.67□□□□□ -1.18
PDLIM5-210ENST00000508216 CLEC19AQ6UXS0 136 aa7.67□□□□□ -1.18
PDLIM5-210ENST00000508216 ZGRF1Q86YA3 2104 aa7.67□□□□□ -1.18
PDLIM5-210ENST00000508216 LOC110117498A0A087WWA1 95 aa7.66□□□□□ -1.18
PDLIM5-210ENST00000508216 LCE6AA0A183 80 aa7.66□□□□□ -1.18
PDLIM5-210ENST00000508216 SRRM5B3KS81 715 aa7.66□□□□□ -1.18
PDLIM5-210ENST00000508216 MRPL33O75394 65 aaKnown RBP7.66□□□□□ -1.18
PDLIM5-210ENST00000508216 C9orf47Q6ZRZ4 202 aa7.66□□□□□ -1.18
PDLIM5-210ENST00000508216 ZNF580Q9UK33 172 aa7.66□□□□□ -1.18
PDLIM5-210ENST00000508216 NAV3Q8IVL0 2385 aa7.66□□□□□ -1.18
PDLIM5-210ENST00000508216 NCR3O14931 201 aa7.66□□□□□ -1.18
PDLIM5-210ENST00000508216 SEM1Q6ZVN7 128 aa7.66□□□□□ -1.18
PDLIM5-210ENST00000508216 BBC3Q96PG8 261 aaPredicted RBP7.66□□□□□ -1.18
PDLIM5-210ENST00000508216 LIMD2Q9BT23 127 aa7.66□□□□□ -1.18
PDLIM5-210ENST00000508216 IGHV3-64A0A075B6Q5 118 aa7.65□□□□□ -1.18
PDLIM5-210ENST00000508216 C10orf142B7Z368 130 aa7.65□□□□□ -1.18
PDLIM5-210ENST00000508216 SVILO95425 2214 aa7.65□□□□□ -1.19
PDLIM5-210ENST00000508216 COL27A1Q8IZC6 1860 aaPredicted RBP7.64□□□□□ -1.19
PDLIM5-210ENST00000508216 A0A087X002 238 aa7.64□□□□□ -1.19
PDLIM5-210ENST00000508216 TRBV6-8A0A0A6YYG3 113 aa7.64□□□□□ -1.19
PDLIM5-210ENST00000508216 PSCAO43653 123 aa7.64□□□□□ -1.19
PDLIM5-210ENST00000508216 C9orf106Q8NAJ2 232 aa7.64□□□□□ -1.19
PDLIM5-210ENST00000508216 C11orf72Q8NBR9 251 aa7.64□□□□□ -1.19
PDLIM5-210ENST00000508216 OCR1Q9BZK8 76 aa7.64□□□□□ -1.19
PDLIM5-210ENST00000508216 A0A087WYN8 130 aa7.64□□□□□ -1.19
PDLIM5-210ENST00000508216 IGKV2-29A2NJV5 120 aaPredicted RBP7.64□□□□□ -1.19
PDLIM5-210ENST00000508216 C5orf67F2Z3F1 127 aa7.64□□□□□ -1.19
PDLIM5-210ENST00000508216 CRPP02741 224 aa7.64□□□□□ -1.19
PDLIM5-210ENST00000508216 PDE6GP18545 87 aa7.64□□□□□ -1.19
PDLIM5-210ENST00000508216 NDPQ00604 133 aa7.64□□□□□ -1.19
PDLIM5-210ENST00000508216 IGFL4Q6B9Z1 124 aa7.64□□□□□ -1.19
PDLIM5-210ENST00000508216 C1orf64Q8NEQ6 169 aa7.64□□□□□ -1.19
PDLIM5-210ENST00000508216 IGLV5-39A0A0G2JS06 123 aa7.63□□□□□ -1.19
PDLIM5-210ENST00000508216 PSPHP1O15172 72 aa7.63□□□□□ -1.19
PDLIM5-210ENST00000508216 ASB16-AS1Q495Z4 193 aa7.63□□□□□ -1.19
PDLIM5-210ENST00000508216 BRWD1Q9NSI6 2320 aa7.63□□□□□ -1.19
PDLIM5-210ENST00000508216 K7EIM0 57 aa7.62□□□□□ -1.19
PDLIM5-210ENST00000508216 MGPP08493 103 aa7.62□□□□□ -1.19
PDLIM5-210ENST00000508216 FAM19A3Q7Z5A8 133 aa7.62□□□□□ -1.19
PDLIM5-210ENST00000508216 PKD1L2Q7Z442 2459 aa7.62□□□□□ -1.19
PDLIM5-210ENST00000508216 PRRC2BQ5JSZ5 2229 aaKnown RBP7.61□□□□□ -1.19
PDLIM5-210ENST00000508216 KLLNB2CW77 178 aa7.61□□□□□ -1.19
PDLIM5-210ENST00000508216 LY6HO94772 140 aa7.61□□□□□ -1.19
PDLIM5-210ENST00000508216 LINC01554Q52M75 96 aa7.61□□□□□ -1.19
PDLIM5-210ENST00000508216 LEAP2Q969E1 77 aa7.61□□□□□ -1.19
PDLIM5-210ENST00000508216 CACNA1GO43497 2377 aa7.61□□□□□ -1.19
PDLIM5-210ENST00000508216 IGHV3-20A0A0C4DH32 117 aa7.61□□□□□ -1.19
PDLIM5-210ENST00000508216 HCG22E2RYF7 251 aa7.61□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms