RNA–Protein interactions for RNA: ENST00000508049.1

CLOCK-207, Transcript of clock circadian regulator, humanhuman

TSL 3

Gene CLOCK, Length 401 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCK-207ENST00000508049 UFC1Q9Y3C8 167 aa-0.96□□□□□ -2.56
CLOCK-207ENST00000508049 PSME4Q14997 1843 aa-0.96□□□□□ -2.56
CLOCK-207ENST00000508049 MED23Q9ULK4 1368 aa-0.96□□□□□ -2.56
CLOCK-207ENST00000508049 ANKRD11Q6UB99 2663 aaPredicted RBP-0.97□□□□□ -2.56
CLOCK-207ENST00000508049 PXDNQ92626 1479 aa-0.97□□□□□ -2.56
CLOCK-207ENST00000508049 APOBP04114 4563 aaKnown RBP-0.97□□□□□ -2.56
CLOCK-207ENST00000508049 TULP4Q9NRJ4 1543 aa-0.97□□□□□ -2.56
CLOCK-207ENST00000508049 HIST1H1BP16401 226 aaKnown RBP-0.97□□□□□ -2.56
CLOCK-207ENST00000508049 GNG3P63215 75 aa-0.97□□□□□ -2.56
CLOCK-207ENST00000508049 HRCT1Q6UXD1 115 aa-0.97□□□□□ -2.56
CLOCK-207ENST00000508049 SNX29P2Q8IUI4 249 aa-0.97□□□□□ -2.56
CLOCK-207ENST00000508049 OR13C6PQ8NH95 151 aa-0.97□□□□□ -2.56
CLOCK-207ENST00000508049 ATP6V0E2Q8NHE4 81 aa-0.97□□□□□ -2.56
CLOCK-207ENST00000508049 PHB2Q99623 299 aa-0.97□□□□□ -2.56
CLOCK-207ENST00000508049 NOP16Q9Y3C1 178 aaKnown RBP-0.97□□□□□ -2.56
CLOCK-207ENST00000508049 MED31Q9Y3C7 131 aa-0.97□□□□□ -2.56
CLOCK-207ENST00000508049 DNAJC15Q9Y5T4 150 aa-0.97□□□□□ -2.56
CLOCK-207ENST00000508049 DNHD1Q96M86 4753 aa-0.97□□□□□ -2.57
CLOCK-207ENST00000508049 AKAP13Q12802 2813 aa-0.97□□□□□ -2.57
CLOCK-207ENST00000508049 ZFHX3Q15911 3703 aa-0.98□□□□□ -2.57
CLOCK-207ENST00000508049 MRC1P22897 1456 aa-0.98□□□□□ -2.57
CLOCK-207ENST00000508049 COL14A1Q05707 1796 aaKnown RBP-0.98□□□□□ -2.57
CLOCK-207ENST00000508049 TEX15Q9BXT5 2789 aa-0.98□□□□□ -2.57
CLOCK-207ENST00000508049 SYNMO15061 1565 aa-0.98□□□□□ -2.57
CLOCK-207ENST00000508049 CCL18P55774 89 aa-0.98□□□□□ -2.57
CLOCK-207ENST00000508049 C9orf116Q5BN46 136 aaPredicted RBP-0.98□□□□□ -2.57
CLOCK-207ENST00000508049 ATP11AUNQ6ZP68 121 aa-0.98□□□□□ -2.57
CLOCK-207ENST00000508049 TMED4Q7Z7H5 227 aa-0.98□□□□□ -2.57
CLOCK-207ENST00000508049 SMIM20Q8N5G0 67 aa-0.98□□□□□ -2.57
CLOCK-207ENST00000508049 C10orf82Q8WW14 230 aa-0.98□□□□□ -2.57
CLOCK-207ENST00000508049 MAFIPQ8WZ33 124 aa-0.98□□□□□ -2.57
CLOCK-207ENST00000508049 SACSQ9NZJ4 4579 aa-0.98□□□□□ -2.57
CLOCK-207ENST00000508049 DNAH1Q9P2D7 4330 aa-0.98□□□□□ -2.57
CLOCK-207ENST00000508049 PLECQ15149 4684 aaKnown RBP-0.98□□□□□ -2.57
CLOCK-207ENST00000508049 COL12A1Q99715 3063 aa-0.99□□□□□ -2.57
CLOCK-207ENST00000508049 ANKRD36A6QL64 1941 aa-0.99□□□□□ -2.57
CLOCK-207ENST00000508049 ACACAQ13085 2346 aa-0.99□□□□□ -2.57
CLOCK-207ENST00000508049 RAPGEF6Q8TEU7 1601 aa-0.99□□□□□ -2.57
CLOCK-207ENST00000508049 CMYA5Q8N3K9 4069 aa-0.99□□□□□ -2.57
CLOCK-207ENST00000508049 TRANK1O15050 2925 aa-0.99□□□□□ -2.57
CLOCK-207ENST00000508049 FAM92AA1XBS5 289 aa-0.99□□□□□ -2.57
CLOCK-207ENST00000508049 J3QLW9 94 aa-0.99□□□□□ -2.57
CLOCK-207ENST00000508049 NIPSNAP2O75323 286 aa-0.99□□□□□ -2.57
CLOCK-207ENST00000508049 PITX3O75364 302 aa-0.99□□□□□ -2.57
CLOCK-207ENST00000508049 SMIM6P0DI80 62 aa-0.99□□□□□ -2.57
CLOCK-207ENST00000508049 POLR2HP52434 150 aaKnown RBP-0.99□□□□□ -2.57
CLOCK-207ENST00000508049 TMEM78Q5T7P6 136 aa-0.99□□□□□ -2.57
CLOCK-207ENST00000508049 FAM24BQ8N5W8 94 aa-0.99□□□□□ -2.57
CLOCK-207ENST00000508049 THEM6Q8WUY1 208 aa-0.99□□□□□ -2.57
CLOCK-207ENST00000508049 SMIM4Q8WVI0 70 aa-0.99□□□□□ -2.57
CLOCK-207ENST00000508049 DYDC1Q8WWB3 177 aa-0.99□□□□□ -2.57
CLOCK-207ENST00000508049 NDUFA12Q9UI09 145 aa-0.99□□□□□ -2.57
CLOCK-207ENST00000508049 DNAH11Q96DT5 4516 aa-0.99□□□□□ -2.57
CLOCK-207ENST00000508049 SPEF2Q9C093 1822 aa-0.99□□□□□ -2.57
CLOCK-207ENST00000508049 SRCAPQ6ZRS2 3230 aa-0.99□□□□□ -2.57
CLOCK-207ENST00000508049 MYH7P12883 1935 aa-0.99□□□□□ -2.57
CLOCK-207ENST00000508049 NBEAQ8NFP9 2946 aa-0.99□□□□□ -2.57
CLOCK-207ENST00000508049 HMGXB3Q12766 1538 aa-0.99□□□□□ -2.57
CLOCK-207ENST00000508049 A0A1W2PRE2 83 aa-1□□□□□ -2.57
CLOCK-207ENST00000508049 E7EQ34 232 aa-1□□□□□ -2.57
CLOCK-207ENST00000508049 NCR2O95944 276 aa-1□□□□□ -2.57
CLOCK-207ENST00000508049 FAM107AO95990 144 aa-1□□□□□ -2.57
CLOCK-207ENST00000508049 PIRTP0C851 137 aa-1□□□□□ -2.57
CLOCK-207ENST00000508049 HSD11B1P28845 292 aa-1□□□□□ -2.57
CLOCK-207ENST00000508049 PSPHP78330 225 aa-1□□□□□ -2.57
CLOCK-207ENST00000508049 LINC01545Q5VT33 79 aa-1□□□□□ -2.57
CLOCK-207ENST00000508049 Q6JHZ5 121 aa-1□□□□□ -2.57
CLOCK-207ENST00000508049 DCUN1D2Q6PH85 259 aa-1□□□□□ -2.57
CLOCK-207ENST00000508049 ZNF818PQ6ZRF7 136 aa-1□□□□□ -2.57
CLOCK-207ENST00000508049 C9orf62Q8N4C0 152 aa-1□□□□□ -2.57
CLOCK-207ENST00000508049 PPP1R14BQ96C90 147 aa-1□□□□□ -2.57
CLOCK-207ENST00000508049 TRAPPC2LQ9UL33 140 aa-1□□□□□ -2.57
CLOCK-207ENST00000508049 EIF3AQ14152 1382 aaKnown RBP-1□□□□□ -2.57
CLOCK-207ENST00000508049 TROQ12816 1431 aaPredicted RBP-1□□□□□ -2.57
CLOCK-207ENST00000508049 ERCC6Q03468 1493 aa-1□□□□□ -2.57
CLOCK-207ENST00000508049 ARHGEF12Q9NZN5 1544 aa-1□□□□□ -2.57
CLOCK-207ENST00000508049 RIMS1Q86UR5 1692 aaKnown RBP-1□□□□□ -2.57
CLOCK-207ENST00000508049 QRICH2Q9H0J4 1663 aa-1□□□□□ -2.57
CLOCK-207ENST00000508049 MARF1Q9Y4F3 1742 aaKnown RBP-1.01□□□□□ -2.57
CLOCK-207ENST00000508049 BORCS7-ASMTA0A0B4J1R7 106 aa-1.01□□□□□ -2.57
CLOCK-207ENST00000508049 M0R135 149 aa-1.01□□□□□ -2.57
CLOCK-207ENST00000508049 YPEL1O60688 119 aa-1.01□□□□□ -2.57
CLOCK-207ENST00000508049 RBP4P02753 201 aa-1.01□□□□□ -2.57
CLOCK-207ENST00000508049 HLA-DRB4P13762 266 aa-1.01□□□□□ -2.57
CLOCK-207ENST00000508049 RPL7P18124 248 aaKnown RBP-1.01□□□□□ -2.57
CLOCK-207ENST00000508049 TCTAP57738 103 aa-1.01□□□□□ -2.57
CLOCK-207ENST00000508049 CCDC115Q96NT0 180 aa-1.01□□□□□ -2.57
CLOCK-207ENST00000508049 AMELXQ99217 191 aa-1.01□□□□□ -2.57
CLOCK-207ENST00000508049 CCDC32Q9BV29 185 aa-1.01□□□□□ -2.57
CLOCK-207ENST00000508049 RPRMQ9NS64 109 aa-1.01□□□□□ -2.57
CLOCK-207ENST00000508049 HLA-DRB4X5D2U9 266 aa-1.01□□□□□ -2.57
CLOCK-207ENST00000508049 WDR87Q6ZQQ6 2873 aa-1.02□□□□□ -2.57
CLOCK-207ENST00000508049 IFNA17P01571 189 aa-1.02□□□□□ -2.57
CLOCK-207ENST00000508049 RGPD2P0DJD1 1756 aa-1.02□□□□□ -2.57
CLOCK-207ENST00000508049 MT1HP80294 61 aa-1.02□□□□□ -2.57
CLOCK-207ENST00000508049 REEP5Q00765 189 aa-1.02□□□□□ -2.57
CLOCK-207ENST00000508049 STX12Q86Y82 276 aa-1.02□□□□□ -2.57
CLOCK-207ENST00000508049 ARAP2Q8WZ64 1704 aa-1.02□□□□□ -2.57
CLOCK-207ENST00000508049 CEP19Q96LK0 163 aa-1.02□□□□□ -2.57
CLOCK-207ENST00000508049 APLNQ9ULZ1 77 aa-1.02□□□□□ -2.57
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms