RNA–Protein interactions for RNA: ENST00000508037.1

HMGB3P16-201, Transcript of high mobility group box 3 pseudogene 16, humanhuman

BASIC

Gene HMGB3P16, Length 287 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P16-201ENST00000508037 C10orf105Q8TEF2 133 aa3.63□□□□□ -1.83
HMGB3P16-201ENST00000508037 DUX3Q96PT4 197 aa3.63□□□□□ -1.83
HMGB3P16-201ENST00000508037 FAM110AQ9BQ89 295 aa3.63□□□□□ -1.83
HMGB3P16-201ENST00000508037 UBE2D4Q9Y2X8 147 aa3.63□□□□□ -1.83
HMGB3P16-201ENST00000508037 CEP250Q9BV73 2442 aa3.63□□□□□ -1.83
HMGB3P16-201ENST00000508037 MUC4Q99102 2169 aa3.62□□□□□ -1.83
HMGB3P16-201ENST00000508037 MAP1BP46821 2468 aaKnown RBP3.62□□□□□ -1.83
HMGB3P16-201ENST00000508037 TRAV8-3A0A0A6YYJ7 113 aa3.62□□□□□ -1.83
HMGB3P16-201ENST00000508037 A0A1W2PPR1 153 aa3.62□□□□□ -1.83
HMGB3P16-201ENST00000508037 B4DSR2 109 aa3.62□□□□□ -1.83
HMGB3P16-201ENST00000508037 J3QLI3 93 aa3.62□□□□□ -1.83
HMGB3P16-201ENST00000508037 CRLF1O75462 422 aa3.62□□□□□ -1.83
HMGB3P16-201ENST00000508037 INSP01308 110 aa3.62□□□□□ -1.83
HMGB3P16-201ENST00000508037 IGKV3-20P01619 116 aa3.62□□□□□ -1.83
HMGB3P16-201ENST00000508037 IGHV3-53P01767 116 aa3.62□□□□□ -1.83
HMGB3P16-201ENST00000508037 IGHV4-38-2P0DP08 117 aa3.62□□□□□ -1.83
HMGB3P16-201ENST00000508037 BLCAPP62952 87 aa3.62□□□□□ -1.83
HMGB3P16-201ENST00000508037 MEIG1Q5JSS6 88 aa3.62□□□□□ -1.83
HMGB3P16-201ENST00000508037 ADAMTSL4-AS1Q5T5F5 129 aa3.62□□□□□ -1.83
HMGB3P16-201ENST00000508037 FAM222AQ5U5X8 452 aa3.62□□□□□ -1.83
HMGB3P16-201ENST00000508037 FAM19A3Q7Z5A8 133 aa3.62□□□□□ -1.83
HMGB3P16-201ENST00000508037 DAND5Q8N907 189 aa3.62□□□□□ -1.83
HMGB3P16-201ENST00000508037 LINC00308Q8TCZ7 52 aa3.62□□□□□ -1.83
HMGB3P16-201ENST00000508037 DUX5Q96PT3 197 aa3.62□□□□□ -1.83
HMGB3P16-201ENST00000508037 CCL19Q99731 98 aa3.62□□□□□ -1.83
HMGB3P16-201ENST00000508037 CHCHD7Q9BUK0 85 aa3.62□□□□□ -1.83
HMGB3P16-201ENST00000508037 PEMTQ9UBM1 199 aa3.62□□□□□ -1.83
HMGB3P16-201ENST00000508037 ACACAQ13085 2346 aa3.62□□□□□ -1.83
HMGB3P16-201ENST00000508037 CNOT1A5YKK6 2376 aaKnown RBP3.62□□□□□ -1.83
HMGB3P16-201ENST00000508037 PRUNE2Q8WUY3 3088 aa3.62□□□□□ -1.83
HMGB3P16-201ENST00000508037 WDFY3Q8IZQ1 3526 aa3.61□□□□□ -1.83
HMGB3P16-201ENST00000508037 TRAV13-2A0A0B4J235 113 aa3.61□□□□□ -1.83
HMGB3P16-201ENST00000508037 IGHV4-61A0A0C4DH41 118 aa3.61□□□□□ -1.83
HMGB3P16-201ENST00000508037 IGLV5-39A0A0G2JS06 123 aa3.61□□□□□ -1.83
HMGB3P16-201ENST00000508037 TRBV10-1A0A0K0K1A3 114 aa3.61□□□□□ -1.83
HMGB3P16-201ENST00000508037 CCDC179H3BU77 68 aa3.61□□□□□ -1.83
HMGB3P16-201ENST00000508037 RS1O15537 224 aa3.61□□□□□ -1.83
HMGB3P16-201ENST00000508037 BEAN1Q3B7T3 259 aa3.61□□□□□ -1.83
HMGB3P16-201ENST00000508037 DEFB104AQ8WTQ1 72 aa3.61□□□□□ -1.83
HMGB3P16-201ENST00000508037 CLEC2BQ92478 149 aa3.61□□□□□ -1.83
HMGB3P16-201ENST00000508037 UBE2E2Q96LR5 201 aa3.61□□□□□ -1.83
HMGB3P16-201ENST00000508037 CSDC2Q9Y534 153 aaKnown RBP3.61□□□□□ -1.83
HMGB3P16-201ENST00000508037 ABCA4P78363 2273 aa3.61□□□□□ -1.83
HMGB3P16-201ENST00000508037 EP300Q09472 2414 aaPredicted RBP3.61□□□□□ -1.83
HMGB3P16-201ENST00000508037 EYSQ5T1H1 3165 aa3.61□□□□□ -1.83
HMGB3P16-201ENST00000508037 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.6□□□□□ -1.83
HMGB3P16-201ENST00000508037 IGKV2-29A2NJV5 120 aaPredicted RBP3.6□□□□□ -1.83
HMGB3P16-201ENST00000508037 HOXD3P31249 432 aaPredicted RBP3.6□□□□□ -1.83
HMGB3P16-201ENST00000508037 ATP5J2P56134 94 aa3.6□□□□□ -1.83
HMGB3P16-201ENST00000508037 SYNJ2BPP57105 145 aa3.6□□□□□ -1.83
HMGB3P16-201ENST00000508037 RPL36AP83881 106 aaKnown RBP3.6□□□□□ -1.83
HMGB3P16-201ENST00000508037 DAZ2Q13117 558 aaKnown RBP3.6□□□□□ -1.83
HMGB3P16-201ENST00000508037 DAZ4Q86SG3 579 aaKnown RBP3.6□□□□□ -1.83
HMGB3P16-201ENST00000508037 RPL36ALQ969Q0 106 aaKnown RBP3.6□□□□□ -1.83
HMGB3P16-201ENST00000508037 FAM104AQ969W3 186 aa3.6□□□□□ -1.83
HMGB3P16-201ENST00000508037 LINC01587Q99440 93 aa3.6□□□□□ -1.83
HMGB3P16-201ENST00000508037 Q9H8V8 135 aa3.6□□□□□ -1.83
HMGB3P16-201ENST00000508037 DAZ3Q9NR90 486 aaKnown RBP3.6□□□□□ -1.83
HMGB3P16-201ENST00000508037 CDKN2A-AS1Q9UH64 79 aa3.6□□□□□ -1.83
HMGB3P16-201ENST00000508037 FRYLO94915 3013 aa3.6□□□□□ -1.83
HMGB3P16-201ENST00000508037 CFAP54Q96N23 3096 aa3.6□□□□□ -1.83
HMGB3P16-201ENST00000508037 MYO15AQ9UKN7 3530 aa3.6□□□□□ -1.83
HMGB3P16-201ENST00000508037 IGHV3-73A0A0B4J1V6 119 aa3.59□□□□□ -1.83
HMGB3P16-201ENST00000508037 KNCNA6PVL3 124 aa3.59□□□□□ -1.83
HMGB3P16-201ENST00000508037 H0YGX0 51 aa3.59□□□□□ -1.83
HMGB3P16-201ENST00000508037 UQCRQO14949 82 aa3.59□□□□□ -1.83
HMGB3P16-201ENST00000508037 CRPP02741 224 aa3.59□□□□□ -1.83
HMGB3P16-201ENST00000508037 BAALC-AS2P0C853 105 aa3.59□□□□□ -1.83
HMGB3P16-201ENST00000508037 HTN1P15515 57 aa3.59□□□□□ -1.83
HMGB3P16-201ENST00000508037 CMC4P56277 68 aaPredicted RBP3.59□□□□□ -1.83
HMGB3P16-201ENST00000508037 DEFB131AP59861 70 aa3.59□□□□□ -1.83
HMGB3P16-201ENST00000508037 NPC2P61916 151 aa3.59□□□□□ -1.83
HMGB3P16-201ENST00000508037 HIST2H2BCQ6DN03 193 aa3.59□□□□□ -1.83
HMGB3P16-201ENST00000508037 HIST2H2BDQ6DRA6 164 aa3.59□□□□□ -1.83
HMGB3P16-201ENST00000508037 CEMP1Q6PRD7 247 aaPredicted RBP3.59□□□□□ -1.83
HMGB3P16-201ENST00000508037 PRIMA1Q86XR5 153 aa3.59□□□□□ -1.83
HMGB3P16-201ENST00000508037 C3orf22Q8N5N4 141 aa3.59□□□□□ -1.83
HMGB3P16-201ENST00000508037 DYNLRB2Q8TF09 96 aa3.59□□□□□ -1.83
HMGB3P16-201ENST00000508037 CITED2Q99967 270 aaPredicted RBP3.59□□□□□ -1.83
HMGB3P16-201ENST00000508037 KRTAP4-2Q9BYR5 136 aa3.59□□□□□ -1.83
HMGB3P16-201ENST00000508037 VPREB3Q9UKI3 123 aa3.59□□□□□ -1.83
HMGB3P16-201ENST00000508037 FREM2Q5SZK8 3169 aa3.59□□□□□ -1.84
HMGB3P16-201ENST00000508037 VPS13AQ96RL7 3174 aa3.58□□□□□ -1.84
HMGB3P16-201ENST00000508037 CACNA1BQ00975 2339 aa3.58□□□□□ -1.84
HMGB3P16-201ENST00000508037 TRAV25A0A0B4J276 109 aa3.58□□□□□ -1.84
HMGB3P16-201ENST00000508037 FAM236AA0A1B0GUQ0 79 aa3.58□□□□□ -1.84
HMGB3P16-201ENST00000508037 FAM236BA0A1B0GV22 79 aa3.58□□□□□ -1.84
HMGB3P16-201ENST00000508037 SMIM1B2RUZ4 78 aa3.58□□□□□ -1.84
HMGB3P16-201ENST00000508037 UBE2L6O14933 153 aa3.58□□□□□ -1.84
HMGB3P16-201ENST00000508037 DNAL4O96015 105 aa3.58□□□□□ -1.84
HMGB3P16-201ENST00000508037 IGHV4-59P01825 116 aa3.58□□□□□ -1.84
HMGB3P16-201ENST00000508037 EDN2P20800 178 aa3.58□□□□□ -1.84
HMGB3P16-201ENST00000508037 RPL28P46779 137 aaKnown RBP3.58□□□□□ -1.84
HMGB3P16-201ENST00000508037 RNASE13Q5GAN3 156 aaKnown RBP3.58□□□□□ -1.84
HMGB3P16-201ENST00000508037 LINC00242Q5T6M2 205 aa3.58□□□□□ -1.84
HMGB3P16-201ENST00000508037 C9orf153Q5TBE3 101 aa3.58□□□□□ -1.84
HMGB3P16-201ENST00000508037 SDIM1Q6ZPB5 146 aa3.58□□□□□ -1.84
HMGB3P16-201ENST00000508037 SMIM20Q8N5G0 67 aa3.58□□□□□ -1.84
HMGB3P16-201ENST00000508037 ZNF625Q96I27 306 aaPredicted RBP3.58□□□□□ -1.84
HMGB3P16-201ENST00000508037 FRYQ5TBA9 3013 aa3.57□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms