RNA–Protein interactions for RNA: ENST00000507955.5

DDX41-208, Transcript of DEAD-box helicase 41, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX41, Length 2,607 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-208ENST00000507955 RPL32P62910 135 aaKnown RBP10.56□□□□□ -0.72
DDX41-208ENST00000507955 CEMP1Q6PRD7 247 aaPredicted RBP10.56□□□□□ -0.72
DDX41-208ENST00000507955 SFTA2Q6UW10 78 aa10.56□□□□□ -0.72
DDX41-208ENST00000507955 ZNRF2Q8NHG8 242 aa10.56□□□□□ -0.72
DDX41-208ENST00000507955 TRBV6-5A0A0K0K1A5 114 aa10.55□□□□□ -0.72
DDX41-208ENST00000507955 LINC01006Q8NI28 216 aa10.55□□□□□ -0.72
DDX41-208ENST00000507955 LINC01549A6NIU2 74 aa10.55□□□□□ -0.72
DDX41-208ENST00000507955 UBE2D1P51668 147 aa10.55□□□□□ -0.72
DDX41-208ENST00000507955 PMVKQ15126 192 aa10.55□□□□□ -0.72
DDX41-208ENST00000507955 GAGE13Q4V321 117 aa10.55□□□□□ -0.72
DDX41-208ENST00000507955 TRPT1Q86TN4 253 aaKnown RBP10.55□□□□□ -0.72
DDX41-208ENST00000507955 WFDC10AQ9H1F0 79 aa10.55□□□□□ -0.72
DDX41-208ENST00000507955 RNASE13Q5GAN3 156 aaKnown RBP10.54□□□□□ -0.72
DDX41-208ENST00000507955 TSSC4Q9Y5U2 329 aaPredicted RBP10.54□□□□□ -0.72
DDX41-208ENST00000507955 NBEAL2Q6ZNJ1 2754 aa10.54□□□□□ -0.72
DDX41-208ENST00000507955 A0A0J9YY99 117 aa10.54□□□□□ -0.72
DDX41-208ENST00000507955 SRSF9Q13242 221 aaKnown RBP eCLIP10.54□□□□□ -0.72
DDX41-208ENST00000507955 TMEM170BQ5T4T1 132 aa10.54□□□□□ -0.72
DDX41-208ENST00000507955 TMEM86BQ8N661 226 aa10.54□□□□□ -0.72
DDX41-208ENST00000507955 GTSF1LQ9H1H1 148 aa10.54□□□□□ -0.72
DDX41-208ENST00000507955 IGHV3-64A0A075B6Q5 118 aa10.53□□□□□ -0.72
DDX41-208ENST00000507955 IGHV3-38A0A0C4DH36 116 aa10.53□□□□□ -0.72
DDX41-208ENST00000507955 J3QKU1 62 aa10.53□□□□□ -0.72
DDX41-208ENST00000507955 TSPAN13O95857 204 aa10.53□□□□□ -0.72
DDX41-208ENST00000507955 A8MTW9 85 aa10.53□□□□□ -0.72
DDX41-208ENST00000507955 SMCPP49901 116 aaPredicted RBP10.53□□□□□ -0.72
DDX41-208ENST00000507955 C11orf72Q8NBR9 251 aa10.53□□□□□ -0.72
DDX41-208ENST00000507955 AMELXQ99217 191 aa10.53□□□□□ -0.72
DDX41-208ENST00000507955 I3L3M4 83 aa10.52□□□□□ -0.73
DDX41-208ENST00000507955 APOMO95445 188 aa10.52□□□□□ -0.73
DDX41-208ENST00000507955 TIMM17AQ99595 171 aa10.52□□□□□ -0.73
DDX41-208ENST00000507955 M0R2P5 195 aa10.52□□□□□ -0.73
DDX41-208ENST00000507955 FHL3Q13643 280 aa10.52□□□□□ -0.73
DDX41-208ENST00000507955 CFAP126Q5VTH2 177 aa10.52□□□□□ -0.73
DDX41-208ENST00000507955 C20orf203Q8NBC4 194 aa10.51□□□□□ -0.73
DDX41-208ENST00000507955 TMEM141Q96I45 108 aa10.51□□□□□ -0.73
DDX41-208ENST00000507955 TENM1Q9UKZ4 2725 aa10.51□□□□□ -0.73
DDX41-208ENST00000507955 STHQ8IWL8 128 aa10.51□□□□□ -0.73
DDX41-208ENST00000507955 GAGE12HA6NDE8 117 aa10.5□□□□□ -0.73
DDX41-208ENST00000507955 NSUN5P1Q3KNT7 163 aa10.5□□□□□ -0.73
DDX41-208ENST00000507955 C1orf158Q8N1D5 194 aa10.5□□□□□ -0.73
DDX41-208ENST00000507955 IGHV3-30P01768 117 aa10.5□□□□□ -0.73
DDX41-208ENST00000507955 IGHV3-30-5P0DP03 117 aa10.5□□□□□ -0.73
DDX41-208ENST00000507955 TMEM238LA0A1B0GVL6 79 aa10.49□□□□□ -0.73
DDX41-208ENST00000507955 A6NJY4 79 aa10.49□□□□□ -0.73
DDX41-208ENST00000507955 INSP01308 110 aa10.49□□□□□ -0.73
DDX41-208ENST00000507955 HERVK_113P61574 105 aa10.49□□□□□ -0.73
DDX41-208ENST00000507955 ZNF415Q09FC8 603 aa10.49□□□□□ -0.73
DDX41-208ENST00000507955 NDUFA11Q86Y39 141 aa10.49□□□□□ -0.73
DDX41-208ENST00000507955 TRAV2A0A0B4J234 112 aa10.49□□□□□ -0.73
DDX41-208ENST00000507955 LOC107984156A0A0G2JMH3 177 aa10.49□□□□□ -0.73
DDX41-208ENST00000507955 A0A0J9YXV3 536 aa10.49□□□□□ -0.73
DDX41-208ENST00000507955 SMAGPQ0VAQ4 97 aa10.49□□□□□ -0.73
DDX41-208ENST00000507955 PAPPA-AS1Q5QFB9 102 aa10.49□□□□□ -0.73
DDX41-208ENST00000507955 ARL17AQ8IVW1 177 aa10.49□□□□□ -0.73
DDX41-208ENST00000507955 FAM104AQ969W3 186 aa10.49□□□□□ -0.73
DDX41-208ENST00000507955 TNFRSF18Q9Y5U5 241 aa10.49□□□□□ -0.73
DDX41-208ENST00000507955 IGHV3-53P01767 116 aa10.48□□□□□ -0.73
DDX41-208ENST00000507955 CFC1BP0CG36 223 aa10.48□□□□□ -0.73
DDX41-208ENST00000507955 CFC1P0CG37 223 aa10.48□□□□□ -0.73
DDX41-208ENST00000507955 UBE2D3P61077 147 aa10.48□□□□□ -0.73
DDX41-208ENST00000507955 UBE2D2P62837 147 aa10.48□□□□□ -0.73
DDX41-208ENST00000507955 IGLV4-3A0A075B6K6 122 aa10.48□□□□□ -0.73
DDX41-208ENST00000507955 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.48□□□□□ -0.73
DDX41-208ENST00000507955 IGKV2-29A2NJV5 120 aaPredicted RBP10.48□□□□□ -0.73
DDX41-208ENST00000507955 PSMB2P49721 201 aa10.48□□□□□ -0.73
DDX41-208ENST00000507955 SLC25A29Q8N8R3 303 aa10.48□□□□□ -0.73
DDX41-208ENST00000507955 J3QQQ9 107 aa10.47□□□□□ -0.73
DDX41-208ENST00000507955 SPATA25Q9BR10 227 aa10.47□□□□□ -0.73
DDX41-208ENST00000507955 A8MWV9 139 aa10.47□□□□□ -0.73
DDX41-208ENST00000507955 EIF4EBP3O60516 100 aaPredicted RBP10.47□□□□□ -0.73
DDX41-208ENST00000507955 RHOHQ15669 191 aa10.47□□□□□ -0.73
DDX41-208ENST00000507955 NFE4Q86UQ8 179 aa10.47□□□□□ -0.73
DDX41-208ENST00000507955 PTH2Q96A98 100 aa10.47□□□□□ -0.73
DDX41-208ENST00000507955 SIGMAR1Q99720 223 aa10.47□□□□□ -0.73
DDX41-208ENST00000507955 TRGV1A0A0A0MS02 117 aa10.46□□□□□ -0.73
DDX41-208ENST00000507955 RPL35AP18077 110 aaKnown RBP10.46□□□□□ -0.73
DDX41-208ENST00000507955 RNASE1P07998 156 aaKnown RBP10.46□□□□□ -0.74
DDX41-208ENST00000507955 ZNF418Q8TF45 676 aaPredicted RBP10.45□□□□□ -0.74
DDX41-208ENST00000507955 VCX2Q9H322 139 aa10.45□□□□□ -0.74
DDX41-208ENST00000507955 J3QR89 54 aa10.45□□□□□ -0.74
DDX41-208ENST00000507955 TCL1BO95988 128 aa10.45□□□□□ -0.74
DDX41-208ENST00000507955 Q6ZTI0 123 aa10.45□□□□□ -0.74
DDX41-208ENST00000507955 TRRAPQ9Y4A5 3859 aa10.44□□□□□ -0.74
DDX41-208ENST00000507955 TMEM223A0PJW6 202 aa10.44□□□□□ -0.74
DDX41-208ENST00000507955 ADARB2-AS1A8MUL3 147 aa10.44□□□□□ -0.74
DDX41-208ENST00000507955 SPXQ9BT56 116 aa10.44□□□□□ -0.74
DDX41-208ENST00000507955 ZNF22P17026 224 aaPredicted RBP10.44□□□□□ -0.74
DDX41-208ENST00000507955 FOXI1Q12951 378 aa10.44□□□□□ -0.74
DDX41-208ENST00000507955 TEX29Q8N6K0 151 aa10.44□□□□□ -0.74
DDX41-208ENST00000507955 C1QTNF4Q9BXJ3 329 aa10.44□□□□□ -0.74
DDX41-208ENST00000507955 GIG44P09565 113 aaPredicted RBP10.43□□□□□ -0.74
DDX41-208ENST00000507955 LINC00467Q9BRT7 94 aa10.43□□□□□ -0.74
DDX41-208ENST00000507955 CHCHD7Q9BUK0 85 aa10.43□□□□□ -0.74
DDX41-208ENST00000507955 A8MZ25 164 aa10.43□□□□□ -0.74
DDX41-208ENST00000507955 LGALS3P17931 250 aaKnown RBP10.43□□□□□ -0.74
DDX41-208ENST00000507955 KRTAP10-3P60369 221 aa10.43□□□□□ -0.74
DDX41-208ENST00000507955 NSD1Q96L73 2696 aaPredicted RBP10.42□□□□□ -0.74
DDX41-208ENST00000507955 C10orf126Q8N4M7 172 aa10.42□□□□□ -0.74
DDX41-208ENST00000507955 TRAV8-3A0A0A6YYJ7 113 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 77.5 ms