RNA–Protein interactions for RNA: ENST00000507536.1

PDGFRA-205, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 1 (best)

Gene PDGFRA, Length 1,146 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-205ENST00000507536 STOML3Q8TAV4 291 aa6.52□□□□□ -1.37
PDGFRA-205ENST00000507536 SPACA4Q8TDM5 124 aa6.52□□□□□ -1.37
PDGFRA-205ENST00000507536 IGLV4-60A0A075B6I1 120 aa6.51□□□□□ -1.37
PDGFRA-205ENST00000507536 A0A087WYN8 130 aa6.51□□□□□ -1.37
PDGFRA-205ENST00000507536 F5H697 171 aa6.51□□□□□ -1.37
PDGFRA-205ENST00000507536 SSTP61278 116 aa6.51□□□□□ -1.37
PDGFRA-205ENST00000507536 ODF1Q14990 250 aa6.51□□□□□ -1.37
PDGFRA-205ENST00000507536 TMEM97Q5BJF2 176 aa6.51□□□□□ -1.37
PDGFRA-205ENST00000507536 SPANXN1Q5VSR9 72 aa6.51□□□□□ -1.37
PDGFRA-205ENST00000507536 IGHV1-24A0A0C4DH33 117 aa6.5□□□□□ -1.37
PDGFRA-205ENST00000507536 A0A0D9SG52 128 aa6.5□□□□□ -1.37
PDGFRA-205ENST00000507536 hDV102S1A0JD36 115 aa6.5□□□□□ -1.37
PDGFRA-205ENST00000507536 ARPC5O15511 151 aa6.5□□□□□ -1.37
PDGFRA-205ENST00000507536 IGLC6P0CF74 106 aa6.5□□□□□ -1.37
PDGFRA-205ENST00000507536 KRTAP15-1Q3LI76 137 aa6.5□□□□□ -1.37
PDGFRA-205ENST00000507536 SUMO4Q6EEV6 95 aa6.5□□□□□ -1.37
PDGFRA-205ENST00000507536 BAGE2Q86Y30 109 aa6.5□□□□□ -1.37
PDGFRA-205ENST00000507536 C15orf56Q8N910 161 aa6.5□□□□□ -1.37
PDGFRA-205ENST00000507536 MBD3L1Q8WWY6 194 aa6.5□□□□□ -1.37
PDGFRA-205ENST00000507536 AP1S3Q96PC3 154 aa6.5□□□□□ -1.37
PDGFRA-205ENST00000507536 A0A1B0GUV1 79 aa6.49□□□□□ -1.37
PDGFRA-205ENST00000507536 A0A1B0GV50 99 aa6.49□□□□□ -1.37
PDGFRA-205ENST00000507536 PHOX2AO14813 284 aa6.49□□□□□ -1.37
PDGFRA-205ENST00000507536 S100A9P06702 114 aaKnown RBP6.49□□□□□ -1.37
PDGFRA-205ENST00000507536 GZMBP10144 247 aa6.49□□□□□ -1.37
PDGFRA-205ENST00000507536 RNF185Q96GF1 192 aa6.49□□□□□ -1.37
PDGFRA-205ENST00000507536 PLAC8Q9NZF1 115 aa6.49□□□□□ -1.37
PDGFRA-205ENST00000507536 IGHV3-64A0A075B6Q5 118 aa6.48□□□□□ -1.37
PDGFRA-205ENST00000507536 TRAV8-4A0A0B4J246 113 aa6.48□□□□□ -1.37
PDGFRA-205ENST00000507536 P01737 135 aa6.48□□□□□ -1.37
PDGFRA-205ENST00000507536 RPL35P42766 123 aaKnown RBP6.48□□□□□ -1.37
PDGFRA-205ENST00000507536 SREK1IP1Q8N9Q2 155 aaPredicted RBP6.48□□□□□ -1.37
PDGFRA-205ENST00000507536 SFT2D1Q8WV19 159 aa6.48□□□□□ -1.37
PDGFRA-205ENST00000507536 SMLR1H3BR10 107 aa6.47□□□□□ -1.37
PDGFRA-205ENST00000507536 MGPP08493 103 aa6.47□□□□□ -1.37
PDGFRA-205ENST00000507536 SMIM17P0DL12 118 aa6.47□□□□□ -1.37
PDGFRA-205ENST00000507536 RAB5CP51148 216 aa6.47□□□□□ -1.37
PDGFRA-205ENST00000507536 NKX2-5P52952 324 aaPredicted RBP6.47□□□□□ -1.37
PDGFRA-205ENST00000507536 TMUB2Q71RG4 321 aa6.47□□□□□ -1.37
PDGFRA-205ENST00000507536 FAM213BQ8TBF2 198 aa6.47□□□□□ -1.37
PDGFRA-205ENST00000507536 C11orf52Q96A22 123 aa6.47□□□□□ -1.37
PDGFRA-205ENST00000507536 PGLYRP4Q96LB8 373 aa6.47□□□□□ -1.37
PDGFRA-205ENST00000507536 TMEM243Q9BU79 118 aa6.47□□□□□ -1.37
PDGFRA-205ENST00000507536 LPAP08519 4548 aa6.46□□□□□ -1.37
PDGFRA-205ENST00000507536 C19orf71A6NCJ1 209 aa6.46□□□□□ -1.38
PDGFRA-205ENST00000507536 ZNF345Q14585 488 aa6.46□□□□□ -1.38
PDGFRA-205ENST00000507536 RGS21Q2M5E4 152 aa6.46□□□□□ -1.38
PDGFRA-205ENST00000507536 KCNRGQ8N5I3 272 aa6.46□□□□□ -1.38
PDGFRA-205ENST00000507536 FER1L6-AS1Q8NA97 138 aa6.46□□□□□ -1.38
PDGFRA-205ENST00000507536 LINC01600Q96MT4 127 aa6.46□□□□□ -1.38
PDGFRA-205ENST00000507536 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.45□□□□□ -1.38
PDGFRA-205ENST00000507536 UMAD1C9J7I0 102 aa6.45□□□□□ -1.38
PDGFRA-205ENST00000507536 H7C1H1 209 aa6.45□□□□□ -1.38
PDGFRA-205ENST00000507536 CCL20P78556 96 aa6.45□□□□□ -1.38
PDGFRA-205ENST00000507536 PRR3P79522 188 aaKnown RBP6.45□□□□□ -1.38
PDGFRA-205ENST00000507536 COX6A2Q02221 97 aa6.45□□□□□ -1.38
PDGFRA-205ENST00000507536 CENPWQ5EE01 88 aa6.45□□□□□ -1.38
PDGFRA-205ENST00000507536 RASL11AQ6T310 242 aa6.45□□□□□ -1.38
PDGFRA-205ENST00000507536 PRSS3P2Q8NHM4 247 aa6.45□□□□□ -1.38
PDGFRA-205ENST00000507536 TPPP3Q9BW30 176 aa6.45□□□□□ -1.38
PDGFRA-205ENST00000507536 TRBV20OR9-2A0A075B6H5 130 aa6.44□□□□□ -1.38
PDGFRA-205ENST00000507536 KRTAP5-3Q6L8H2 238 aa6.44□□□□□ -1.38
PDGFRA-205ENST00000507536 OR2D3Q8NGH3 330 aa6.44□□□□□ -1.38
PDGFRA-205ENST00000507536 NIT2Q9NQR4 276 aa6.44□□□□□ -1.38
PDGFRA-205ENST00000507536 GAGE12HA6NDE8 117 aa6.43□□□□□ -1.38
PDGFRA-205ENST00000507536 B5MCH6 92 aa6.43□□□□□ -1.38
PDGFRA-205ENST00000507536 CTRLP40313 264 aa6.43□□□□□ -1.38
PDGFRA-205ENST00000507536 CACNG7P62955 275 aa6.43□□□□□ -1.38
PDGFRA-205ENST00000507536 HIGD2BQ4VC39 106 aa6.43□□□□□ -1.38
PDGFRA-205ENST00000507536 TMA7Q9Y2S6 64 aaKnown RBP6.43□□□□□ -1.38
PDGFRA-205ENST00000507536 A0A096LNI7 61 aa6.42□□□□□ -1.38
PDGFRA-205ENST00000507536 GVQW2A0A096LPI5 108 aaPredicted RBP6.42□□□□□ -1.38
PDGFRA-205ENST00000507536 IGKV2-24A0A0C4DH68 120 aa6.42□□□□□ -1.38
PDGFRA-205ENST00000507536 RAB19A4D1S5 217 aa6.42□□□□□ -1.38
PDGFRA-205ENST00000507536 BCL2L11O43521 198 aa6.42□□□□□ -1.38
PDGFRA-205ENST00000507536 NDUFS6O75380 124 aaKnown RBP6.42□□□□□ -1.38
PDGFRA-205ENST00000507536 RPS10P46783 165 aaKnown RBP6.42□□□□□ -1.38
PDGFRA-205ENST00000507536 AMTP48728 403 aa6.42□□□□□ -1.38
PDGFRA-205ENST00000507536 KRTAP10-8P60410 259 aa6.42□□□□□ -1.38
PDGFRA-205ENST00000507536 WDR73Q6P4I2 378 aa6.42□□□□□ -1.38
PDGFRA-205ENST00000507536 LYZL1Q6UWQ5 148 aa6.42□□□□□ -1.38
PDGFRA-205ENST00000507536 C7orf33Q8WU49 177 aa6.42□□□□□ -1.38
PDGFRA-205ENST00000507536 DPH3Q96FX2 82 aa6.42□□□□□ -1.38
PDGFRA-205ENST00000507536 CNFNQ9BYD5 112 aa6.42□□□□□ -1.38
PDGFRA-205ENST00000507536 DPH3P1Q9H4G8 78 aa6.42□□□□□ -1.38
PDGFRA-205ENST00000507536 MANBALQ9NQG1 85 aa6.42□□□□□ -1.38
PDGFRA-205ENST00000507536 TRAV26-2A0A0B4J265 109 aa6.41□□□□□ -1.38
PDGFRA-205ENST00000507536 A0A0J9YXV3 536 aa6.41□□□□□ -1.38
PDGFRA-205ENST00000507536 F2Z2F3 143 aa6.41□□□□□ -1.38
PDGFRA-205ENST00000507536 NTF3P20783 257 aa6.41□□□□□ -1.38
PDGFRA-205ENST00000507536 SULT1A2P50226 295 aa6.41□□□□□ -1.38
PDGFRA-205ENST00000507536 RPS20P60866 119 aaKnown RBP6.41□□□□□ -1.38
PDGFRA-205ENST00000507536 COTL1Q14019 142 aa6.41□□□□□ -1.38
PDGFRA-205ENST00000507536 MAJINQ3KP22 176 aa6.41□□□□□ -1.38
PDGFRA-205ENST00000507536 STPG4Q8N801 248 aa6.41□□□□□ -1.38
PDGFRA-205ENST00000507536 GATD1Q8NB37 220 aa6.41□□□□□ -1.38
PDGFRA-205ENST00000507536 CHCHD10Q8WYQ3 142 aaPredicted RBP6.41□□□□□ -1.38
PDGFRA-205ENST00000507536 GNG13Q9P2W3 67 aa6.41□□□□□ -1.38
PDGFRA-205ENST00000507536 TRAV1-1A0A0B4J248 108 aa6.4□□□□□ -1.38
PDGFRA-205ENST00000507536 IGKV3OR2-268A0A0C4DH90 116 aa6.4□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms