RNA–Protein interactions for RNA: ENST00000507326.2

HMGB3P15-201, Transcript of high mobility group box 3 pseudogene 15, humanhuman

BASIC

Gene HMGB3P15, Length 574 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P15-201ENST00000507326 SIX6O95475 246 aa2.31□□□□□ -2.04
HMGB3P15-201ENST00000507326 GIG44P09565 113 aaPredicted RBP2.31□□□□□ -2.04
HMGB3P15-201ENST00000507326 FAM229BQ4G0N7 80 aa2.31□□□□□ -2.04
HMGB3P15-201ENST00000507326 NMSQ5H8A3 153 aa2.31□□□□□ -2.04
HMGB3P15-201ENST00000507326 TMEM170BQ5T4T1 132 aa2.31□□□□□ -2.04
HMGB3P15-201ENST00000507326 Q5W150 140 aa2.31□□□□□ -2.04
HMGB3P15-201ENST00000507326 SPINT4Q6UDR6 99 aa2.31□□□□□ -2.04
HMGB3P15-201ENST00000507326 Q8IYB0 196 aa2.31□□□□□ -2.04
HMGB3P15-201ENST00000507326 TVP23CQ96ET8 276 aa2.31□□□□□ -2.04
HMGB3P15-201ENST00000507326 MANBALQ9NQG1 85 aa2.31□□□□□ -2.04
HMGB3P15-201ENST00000507326 COL1A2P08123 1366 aa2.31□□□□□ -2.04
HMGB3P15-201ENST00000507326 SIP14410 1827 aa2.31□□□□□ -2.04
HMGB3P15-201ENST00000507326 ABCA7Q8IZY2 2146 aa2.3□□□□□ -2.04
HMGB3P15-201ENST00000507326 PRRC2AP48634 2157 aaKnown RBP2.3□□□□□ -2.04
HMGB3P15-201ENST00000507326 BAZ2BQ9UIF8 2168 aaKnown RBP2.3□□□□□ -2.04
HMGB3P15-201ENST00000507326 TRBV7-1A0A0A6YYK4 115 aa2.3□□□□□ -2.04
HMGB3P15-201ENST00000507326 A0A1B0GU33 70 aa2.3□□□□□ -2.04
HMGB3P15-201ENST00000507326 C7orf77A4D0Y5 90 aa2.3□□□□□ -2.04
HMGB3P15-201ENST00000507326 A8MU10 97 aa2.3□□□□□ -2.04
HMGB3P15-201ENST00000507326 C5orf67F2Z3F1 127 aa2.3□□□□□ -2.04
HMGB3P15-201ENST00000507326 IGLV1-51P01701 117 aa2.3□□□□□ -2.04
HMGB3P15-201ENST00000507326 ZNF818PQ6ZRF7 136 aa2.3□□□□□ -2.04
HMGB3P15-201ENST00000507326 LINC00643Q86TS7 51 aa2.3□□□□□ -2.04
HMGB3P15-201ENST00000507326 SPTSSBQ8NFR3 76 aa2.3□□□□□ -2.04
HMGB3P15-201ENST00000507326 LIMD2Q9BT23 127 aa2.3□□□□□ -2.04
HMGB3P15-201ENST00000507326 SCRT1Q9BWW7 348 aa2.3□□□□□ -2.04
HMGB3P15-201ENST00000507326 PRO1854Q9UHT4 67 aa2.3□□□□□ -2.04
HMGB3P15-201ENST00000507326 A0A0G2JMZ2 1700 aa2.3□□□□□ -2.04
HMGB3P15-201ENST00000507326 LRRC37A2A6NM11 1700 aa2.3□□□□□ -2.04
HMGB3P15-201ENST00000507326 COL11A1P12107 1806 aaPredicted RBP2.3□□□□□ -2.04
HMGB3P15-201ENST00000507326 KIAA1549LQ6ZVL6 1849 aa2.3□□□□□ -2.04
HMGB3P15-201ENST00000507326 FREM3P0C091 2139 aa2.29□□□□□ -2.04
HMGB3P15-201ENST00000507326 COL27A1Q8IZC6 1860 aaPredicted RBP2.29□□□□□ -2.04
HMGB3P15-201ENST00000507326 IGKV1D-42A0A075B6H8 117 aa2.29□□□□□ -2.04
HMGB3P15-201ENST00000507326 IGLV3-12A0A075B6K2 115 aa2.29□□□□□ -2.04
HMGB3P15-201ENST00000507326 A0A0J9YX75 114 aa2.29□□□□□ -2.04
HMGB3P15-201ENST00000507326 LOC285095A0A1B0GVY8 99 aa2.29□□□□□ -2.04
HMGB3P15-201ENST00000507326 TMEM30CPA0ZSE6 113 aa2.29□□□□□ -2.04
HMGB3P15-201ENST00000507326 NUPR1O60356 82 aa2.29□□□□□ -2.04
HMGB3P15-201ENST00000507326 CLPSP04118 112 aa2.29□□□□□ -2.04
HMGB3P15-201ENST00000507326 IGFL3Q6UXB1 125 aa2.29□□□□□ -2.04
HMGB3P15-201ENST00000507326 KRTAP5-5Q701N2 237 aaPredicted RBP2.29□□□□□ -2.04
HMGB3P15-201ENST00000507326 FAM19A2Q8N3H0 131 aa2.29□□□□□ -2.04
HMGB3P15-201ENST00000507326 LINC00612Q8N6U2 182 aa2.29□□□□□ -2.04
HMGB3P15-201ENST00000507326 CDC42SE1Q9NRR8 79 aa2.29□□□□□ -2.04
HMGB3P15-201ENST00000507326 MINOS1-NBL1R4GNA1 71 aa2.29□□□□□ -2.04
HMGB3P15-201ENST00000507326 MYOFQ9NZM1 2061 aa2.29□□□□□ -2.04
HMGB3P15-201ENST00000507326 EML5Q05BV3 1969 aa2.29□□□□□ -2.04
HMGB3P15-201ENST00000507326 PRR14LQ5THK1 2151 aa2.28□□□□□ -2.04
HMGB3P15-201ENST00000507326 TRAV40A0A0B4J280 105 aa2.28□□□□□ -2.04
HMGB3P15-201ENST00000507326 MUC21A0A140T8X8 626 aa2.28□□□□□ -2.04
HMGB3P15-201ENST00000507326 HCG22E2RYF7 251 aa2.28□□□□□ -2.04
HMGB3P15-201ENST00000507326 PANO1I0J062 215 aa2.28□□□□□ -2.04
HMGB3P15-201ENST00000507326 ZNF22P17026 224 aaPredicted RBP2.28□□□□□ -2.04
HMGB3P15-201ENST00000507326 MIR22HGQ0VDD5 57 aa2.28□□□□□ -2.04
HMGB3P15-201ENST00000507326 ZGRF1Q86YA3 2104 aa2.28□□□□□ -2.04
HMGB3P15-201ENST00000507326 LYPD1Q8N2G4 141 aa2.28□□□□□ -2.04
HMGB3P15-201ENST00000507326 Q8NAQ8 132 aa2.28□□□□□ -2.04
HMGB3P15-201ENST00000507326 FAM167A-AS1Q96KT0 104 aa2.28□□□□□ -2.04
HMGB3P15-201ENST00000507326 C22orf24Q9Y442 160 aa2.28□□□□□ -2.04
HMGB3P15-201ENST00000507326 PDCD11Q14690 1871 aaKnown RBP2.28□□□□□ -2.04
HMGB3P15-201ENST00000507326 WDR90Q96KV7 1748 aa2.28□□□□□ -2.05
HMGB3P15-201ENST00000507326 KIAA0100Q14667 2235 aaKnown RBP2.27□□□□□ -2.05
HMGB3P15-201ENST00000507326 MGAMO43451 1857 aa2.27□□□□□ -2.05
HMGB3P15-201ENST00000507326 DEFA4P12838 97 aa2.27□□□□□ -2.05
HMGB3P15-201ENST00000507326 EDDM3BP56851 147 aa2.27□□□□□ -2.05
HMGB3P15-201ENST00000507326 WFDC2Q14508 124 aa2.27□□□□□ -2.05
HMGB3P15-201ENST00000507326 LINC01600Q96MT4 127 aa2.27□□□□□ -2.05
HMGB3P15-201ENST00000507326 PSORS1C2Q9UIG4 136 aa2.27□□□□□ -2.05
HMGB3P15-201ENST00000507326 S4R3C0 116 aa2.27□□□□□ -2.05
HMGB3P15-201ENST00000507326 IGKV1D-17A0A075B6S4 117 aa2.26□□□□□ -2.05
HMGB3P15-201ENST00000507326 IGHV3OR16-8A0A075B7F1 116 aa2.26□□□□□ -2.05
HMGB3P15-201ENST00000507326 TRAV12-1A0A0B4J245 112 aa2.26□□□□□ -2.05
HMGB3P15-201ENST00000507326 TRBV10-1A0A0K0K1A3 114 aa2.26□□□□□ -2.05
HMGB3P15-201ENST00000507326 SFTA3P0C7M3 94 aa2.26□□□□□ -2.05
HMGB3P15-201ENST00000507326 KLKP1Q107X0 134 aa2.26□□□□□ -2.05
HMGB3P15-201ENST00000507326 ELOBQ15370 118 aa2.26□□□□□ -2.05
HMGB3P15-201ENST00000507326 ZNF79Q15937 498 aa2.26□□□□□ -2.05
HMGB3P15-201ENST00000507326 LY6EQ16553 131 aa2.26□□□□□ -2.05
HMGB3P15-201ENST00000507326 C10orf128Q5T292 105 aa2.26□□□□□ -2.05
HMGB3P15-201ENST00000507326 CFAP126Q5VTH2 177 aa2.26□□□□□ -2.05
HMGB3P15-201ENST00000507326 Q6ZR54 194 aa2.26□□□□□ -2.05
HMGB3P15-201ENST00000507326 C6orf201Q7Z4U5 140 aa2.26□□□□□ -2.05
HMGB3P15-201ENST00000507326 CLECL1Q8IZS7 167 aa2.26□□□□□ -2.05
HMGB3P15-201ENST00000507326 PPP1R1CQ8WVI7 109 aa2.26□□□□□ -2.05
HMGB3P15-201ENST00000507326 C20orf166-AS1Q96NR2 134 aa2.26□□□□□ -2.05
HMGB3P15-201ENST00000507326 CPAMD8Q8IZJ3 1885 aa2.26□□□□□ -2.05
HMGB3P15-201ENST00000507326 PI4KAP42356 2102 aa2.26□□□□□ -2.05
HMGB3P15-201ENST00000507326 TRBV7-3A0A075B6L6 115 aa2.25□□□□□ -2.05
HMGB3P15-201ENST00000507326 ZNF815PA8K554 130 aa2.25□□□□□ -2.05
HMGB3P15-201ENST00000507326 ZNF791Q3KP31 576 aaPredicted RBP2.25□□□□□ -2.05
HMGB3P15-201ENST00000507326 VMO1Q7Z5L0 202 aa2.25□□□□□ -2.05
HMGB3P15-201ENST00000507326 DMAC1Q96GE9 116 aa2.25□□□□□ -2.05
HMGB3P15-201ENST00000507326 ORMDL1Q9P0S3 153 aa2.25□□□□□ -2.05
HMGB3P15-201ENST00000507326 MPDZO75970 2070 aa2.25□□□□□ -2.05
HMGB3P15-201ENST00000507326 CACNA1DQ01668 2161 aa2.25□□□□□ -2.05
HMGB3P15-201ENST00000507326 TRAV12-3A0A0B4J271 114 aa2.24□□□□□ -2.05
HMGB3P15-201ENST00000507326 A0A0G2JND7 137 aa2.24□□□□□ -2.05
HMGB3P15-201ENST00000507326 A0A1B0GWA3 101 aa2.24□□□□□ -2.05
HMGB3P15-201ENST00000507326 HIGD1CA8MV81 97 aa2.24□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms