RNA–Protein interactions for RNA: ENST00000506858.2

SCAMP1-202, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 1 (best)

Gene SCAMP1, Length 1,603 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-202ENST00000506858 LGALS9CQ6DKI2 356 aa6.04□□□□□ -1.44
SCAMP1-202ENST00000506858 FRZBQ92765 325 aa6.04□□□□□ -1.44
SCAMP1-202ENST00000506858 MRAP2Q96G30 205 aa6.04□□□□□ -1.44
SCAMP1-202ENST00000506858 TRAV9-1A0A075B6T8 112 aa6.03□□□□□ -1.44
SCAMP1-202ENST00000506858 SDHAF1A6NFY7 115 aa6.03□□□□□ -1.44
SCAMP1-202ENST00000506858 TNFRSF6BO95407 300 aa6.03□□□□□ -1.44
SCAMP1-202ENST00000506858 APCSP02743 223 aa6.03□□□□□ -1.44
SCAMP1-202ENST00000506858 FABP9Q0Z7S8 132 aa6.03□□□□□ -1.44
SCAMP1-202ENST00000506858 DNAJC30Q96LL9 226 aa6.03□□□□□ -1.44
SCAMP1-202ENST00000506858 PRELID3AQ96N28 172 aa6.03□□□□□ -1.44
SCAMP1-202ENST00000506858 ST20Q9HBF5 79 aa6.03□□□□□ -1.44
SCAMP1-202ENST00000506858 TRBV24-1A0A075B6N3 115 aa6.03□□□□□ -1.44
SCAMP1-202ENST00000506858 PMCHP20382 165 aa6.03□□□□□ -1.44
SCAMP1-202ENST00000506858 TMEM70Q9BUB7 260 aa6.03□□□□□ -1.44
SCAMP1-202ENST00000506858 GNB1LQ9BYB4 327 aa6.03□□□□□ -1.44
SCAMP1-202ENST00000506858 Q9H8V8 135 aa6.03□□□□□ -1.44
SCAMP1-202ENST00000506858 MRPS16Q9Y3D3 137 aaKnown RBP6.03□□□□□ -1.44
SCAMP1-202ENST00000506858 COLCA2A8K830 154 aa6.02□□□□□ -1.45
SCAMP1-202ENST00000506858 IGHV3-30P01768 117 aa6.02□□□□□ -1.45
SCAMP1-202ENST00000506858 IGHV3-33P01772 117 aa6.02□□□□□ -1.45
SCAMP1-202ENST00000506858 IGHV3-30-3P0DP02 117 aa6.02□□□□□ -1.45
SCAMP1-202ENST00000506858 IGHV3-30-5P0DP03 117 aa6.02□□□□□ -1.45
SCAMP1-202ENST00000506858 POLR2KP53803 58 aaKnown RBP6.02□□□□□ -1.45
SCAMP1-202ENST00000506858 GAGE6Q13070 117 aa6.02□□□□□ -1.45
SCAMP1-202ENST00000506858 ORMDL3Q8N138 153 aa6.02□□□□□ -1.45
SCAMP1-202ENST00000506858 KRTAP1-5Q9BYS1 174 aa6.02□□□□□ -1.45
SCAMP1-202ENST00000506858 TRAPPC1Q9Y5R8 145 aa6.02□□□□□ -1.45
SCAMP1-202ENST00000506858 TRBV6-8A0A0A6YYG3 113 aa6.01□□□□□ -1.45
SCAMP1-202ENST00000506858 TRBV6-5A0A0K0K1A5 114 aa6.01□□□□□ -1.45
SCAMP1-202ENST00000506858 TMEM262E9PQX1 116 aa6.01□□□□□ -1.45
SCAMP1-202ENST00000506858 TCAPO15273 167 aa6.01□□□□□ -1.45
SCAMP1-202ENST00000506858 TSHBP01222 138 aa6.01□□□□□ -1.45
SCAMP1-202ENST00000506858 SUMO2P61956 95 aaKnown RBP6.01□□□□□ -1.45
SCAMP1-202ENST00000506858 LELP1Q5T871 98 aa6.01□□□□□ -1.45
SCAMP1-202ENST00000506858 SH2D6Q7Z4S9 175 aa6.01□□□□□ -1.45
SCAMP1-202ENST00000506858 DAZ4Q86SG3 579 aaKnown RBP6.01□□□□□ -1.45
SCAMP1-202ENST00000506858 DAZ3Q9NR90 486 aaKnown RBP6.01□□□□□ -1.45
SCAMP1-202ENST00000506858 DNAH17Q9UFH2 4485 aa6.01□□□□□ -1.45
SCAMP1-202ENST00000506858 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6□□□□□ -1.45
SCAMP1-202ENST00000506858 IGKV2-29A2NJV5 120 aaPredicted RBP6□□□□□ -1.45
SCAMP1-202ENST00000506858 SIVA1O15304 175 aa6□□□□□ -1.45
SCAMP1-202ENST00000506858 HLA-DQA1P01909 254 aa6□□□□□ -1.45
SCAMP1-202ENST00000506858 COTL1Q14019 142 aa6□□□□□ -1.45
SCAMP1-202ENST00000506858 IQCJQ1A5X6 159 aa6□□□□□ -1.45
SCAMP1-202ENST00000506858 CHCHD5Q9BSY4 110 aa6□□□□□ -1.45
SCAMP1-202ENST00000506858 TRAV8-6A0A0B4J262 113 aa5.99□□□□□ -1.45
SCAMP1-202ENST00000506858 I3L3M4 83 aa5.99□□□□□ -1.45
SCAMP1-202ENST00000506858 S100A1P23297 94 aa5.99□□□□□ -1.45
SCAMP1-202ENST00000506858 AMTP48728 403 aa5.99□□□□□ -1.45
SCAMP1-202ENST00000506858 TIRAPP58753 221 aa5.99□□□□□ -1.45
SCAMP1-202ENST00000506858 Q8N976 141 aa5.99□□□□□ -1.45
SCAMP1-202ENST00000506858 SREK1IP1Q8N9Q2 155 aaPredicted RBP5.99□□□□□ -1.45
SCAMP1-202ENST00000506858 ALKBH7Q9BT30 221 aaPredicted RBP5.99□□□□□ -1.45
SCAMP1-202ENST00000506858 UPK3BQ9BT76 320 aa5.99□□□□□ -1.45
SCAMP1-202ENST00000506858 TRBV27A0A0K0K1C4 114 aa5.99□□□□□ -1.45
SCAMP1-202ENST00000506858 VCYO14598 125 aa5.99□□□□□ -1.45
SCAMP1-202ENST00000506858 PPBPP02775 128 aa5.99□□□□□ -1.45
SCAMP1-202ENST00000506858 TRGC2P03986 189 aa5.99□□□□□ -1.45
SCAMP1-202ENST00000506858 IFI27P40305 119 aaPredicted RBP5.99□□□□□ -1.45
SCAMP1-202ENST00000506858 CHCHD7Q9BUK0 85 aa5.99□□□□□ -1.45
SCAMP1-202ENST00000506858 SMIM2Q9BVW6 85 aa5.99□□□□□ -1.45
SCAMP1-202ENST00000506858 TRBV25-1A0A075B6N4 114 aa5.98□□□□□ -1.45
SCAMP1-202ENST00000506858 IGHV1-24A0A0C4DH33 117 aa5.98□□□□□ -1.45
SCAMP1-202ENST00000506858 NBDYA0A0U1RRE5 68 aa5.98□□□□□ -1.45
SCAMP1-202ENST00000506858 RAB5AP20339 215 aa5.98□□□□□ -1.45
SCAMP1-202ENST00000506858 MPV17L2Q567V2 206 aa5.98□□□□□ -1.45
SCAMP1-202ENST00000506858 NIT1Q86X76 327 aa5.98□□□□□ -1.45
SCAMP1-202ENST00000506858 C20orf78Q9BR46 151 aa5.98□□□□□ -1.45
SCAMP1-202ENST00000506858 TMEM243Q9BU79 118 aa5.98□□□□□ -1.45
SCAMP1-202ENST00000506858 MAP1LC3AQ9H492 121 aa5.98□□□□□ -1.45
SCAMP1-202ENST00000506858 FRAS1Q86XX4 4008 aa5.98□□□□□ -1.45
SCAMP1-202ENST00000506858 FAT2Q9NYQ8 4349 aa5.97□□□□□ -1.45
SCAMP1-202ENST00000506858 PPP1R17O96001 155 aa5.97□□□□□ -1.45
SCAMP1-202ENST00000506858 MT-ND6P03923 174 aa5.97□□□□□ -1.45
SCAMP1-202ENST00000506858 FCER1GP30273 86 aa5.97□□□□□ -1.45
SCAMP1-202ENST00000506858 RPL39P62891 51 aaKnown RBP5.97□□□□□ -1.45
SCAMP1-202ENST00000506858 COX19Q49B96 90 aa5.97□□□□□ -1.45
SCAMP1-202ENST00000506858 CLPSL2Q6UWE3 100 aa5.97□□□□□ -1.45
SCAMP1-202ENST00000506858 IGLV4-60A0A075B6I1 120 aa5.96□□□□□ -1.45
SCAMP1-202ENST00000506858 A0A087WX48 190 aa5.96□□□□□ -1.45
SCAMP1-202ENST00000506858 DNAH10OSP0CZ25 163 aa5.96□□□□□ -1.45
SCAMP1-202ENST00000506858 ESDP10768 282 aa5.96□□□□□ -1.45
SCAMP1-202ENST00000506858 RBX1P62877 108 aa5.96□□□□□ -1.45
SCAMP1-202ENST00000506858 Q6ZR54 194 aa5.96□□□□□ -1.45
SCAMP1-202ENST00000506858 Q8N8P6 123 aa5.96□□□□□ -1.45
SCAMP1-202ENST00000506858 KLK12Q9UKR0 248 aa5.96□□□□□ -1.45
SCAMP1-202ENST00000506858 DNAH11Q96DT5 4516 aa5.96□□□□□ -1.45
SCAMP1-202ENST00000506858 H3BS24 57 aa5.96□□□□□ -1.46
SCAMP1-202ENST00000506858 PHOX2AO14813 284 aa5.96□□□□□ -1.46
SCAMP1-202ENST00000506858 LINC01556Q5JQF7 62 aa5.96□□□□□ -1.46
SCAMP1-202ENST00000506858 RNASEKQ6P5S7 137 aaKnown RBP5.96□□□□□ -1.46
SCAMP1-202ENST00000506858 PRSS3P2Q8NHM4 247 aa5.96□□□□□ -1.46
SCAMP1-202ENST00000506858 C18orf32Q8TCD1 76 aa5.96□□□□□ -1.46
SCAMP1-202ENST00000506858 URB1-AS1Q96HZ7 61 aa5.96□□□□□ -1.46
SCAMP1-202ENST00000506858 KIR2DL4Q99706 377 aa5.96□□□□□ -1.46
SCAMP1-202ENST00000506858 OPRPNQ99935 248 aaPredicted RBP5.96□□□□□ -1.46
SCAMP1-202ENST00000506858 Q9HAA7 133 aa5.96□□□□□ -1.46
SCAMP1-202ENST00000506858 IGKV3OR2-268A0A0C4DH90 116 aa5.95□□□□□ -1.46
SCAMP1-202ENST00000506858 UBE2L6O14933 153 aa5.95□□□□□ -1.46
SCAMP1-202ENST00000506858 FGF6P10767 208 aa5.95□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms