RNA–Protein interactions for RNA: ENST00000506687.5

CPNE4-207, Transcript of copine 4, humanhuman

TSL 3

Gene CPNE4, Length 447 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-207ENST00000506687 SPART-AS1P0CW21 52 aa3.4□□□□□ -1.87
CPNE4-207ENST00000506687 AKR1C3P42330 323 aa3.4□□□□□ -1.87
CPNE4-207ENST00000506687 RPL35P42766 123 aaKnown RBP3.4□□□□□ -1.87
CPNE4-207ENST00000506687 TCL1AP56279 114 aa3.4□□□□□ -1.87
CPNE4-207ENST00000506687 CXCL6P80162 114 aa3.4□□□□□ -1.87
CPNE4-207ENST00000506687 IBA57Q5T440 356 aaKnown RBP3.4□□□□□ -1.87
CPNE4-207ENST00000506687 FAM222AQ5U5X8 452 aa3.4□□□□□ -1.87
CPNE4-207ENST00000506687 LGALS9CQ6DKI2 356 aa3.4□□□□□ -1.87
CPNE4-207ENST00000506687 C2orf66Q6UXQ4 117 aa3.4□□□□□ -1.87
CPNE4-207ENST00000506687 NOTCH2NLQ7Z3S9 236 aa3.4□□□□□ -1.87
CPNE4-207ENST00000506687 BAGE2Q86Y30 109 aa3.4□□□□□ -1.87
CPNE4-207ENST00000506687 C16orf74Q96GX8 76 aa3.4□□□□□ -1.87
CPNE4-207ENST00000506687 C18orf15Q96N68 181 aa3.4□□□□□ -1.87
CPNE4-207ENST00000506687 DERL1Q9BUN8 251 aa3.4□□□□□ -1.87
CPNE4-207ENST00000506687 SMDT1Q9H4I9 107 aa3.4□□□□□ -1.87
CPNE4-207ENST00000506687 SMCO4Q9NRQ5 59 aa3.4□□□□□ -1.87
CPNE4-207ENST00000506687 MDFICQ9P1T7 246 aa3.4□□□□□ -1.87
CPNE4-207ENST00000506687 VPS13DQ5THJ4 4388 aa3.4□□□□□ -1.87
CPNE4-207ENST00000506687 HMCN2Q8NDA2 5059 aa3.4□□□□□ -1.87
CPNE4-207ENST00000506687 FAT2Q9NYQ8 4349 aa3.4□□□□□ -1.87
CPNE4-207ENST00000506687 C19orf71A6NCJ1 209 aa3.39□□□□□ -1.87
CPNE4-207ENST00000506687 C1orf196B1AJZ1 125 aa3.39□□□□□ -1.87
CPNE4-207ENST00000506687 TMEM238C9JI98 176 aa3.39□□□□□ -1.87
CPNE4-207ENST00000506687 IFNA1P01562 189 aa3.39□□□□□ -1.87
CPNE4-207ENST00000506687 MT-ND4LP03901 98 aa3.39□□□□□ -1.87
CPNE4-207ENST00000506687 SRP19P09132 144 aaKnown RBP3.39□□□□□ -1.87
CPNE4-207ENST00000506687 RNASE3P12724 160 aaKnown RBP3.39□□□□□ -1.87
CPNE4-207ENST00000506687 HTN1P15515 57 aa3.39□□□□□ -1.87
CPNE4-207ENST00000506687 EMP1P54849 157 aa3.39□□□□□ -1.87
CPNE4-207ENST00000506687 UBE2G1P62253 170 aa3.39□□□□□ -1.87
CPNE4-207ENST00000506687 PRR4Q16378 134 aa3.39□□□□□ -1.87
CPNE4-207ENST00000506687 LGALS9BQ3B8N2 356 aa3.39□□□□□ -1.87
CPNE4-207ENST00000506687 TTC32Q5I0X7 151 aa3.39□□□□□ -1.87
CPNE4-207ENST00000506687 CEMP1Q6PRD7 247 aaPredicted RBP3.39□□□□□ -1.87
CPNE4-207ENST00000506687 Q6ZTC4 211 aa3.39□□□□□ -1.87
CPNE4-207ENST00000506687 FAM19A5Q7Z5A7 132 aaPredicted RBP3.39□□□□□ -1.87
CPNE4-207ENST00000506687 SMIM12Q96EX1 92 aa3.39□□□□□ -1.87
CPNE4-207ENST00000506687 RNF185Q96GF1 192 aa3.39□□□□□ -1.87
CPNE4-207ENST00000506687 NDFIP1Q9BT67 221 aa3.39□□□□□ -1.87
CPNE4-207ENST00000506687 MAP1LC3AQ9H492 121 aa3.39□□□□□ -1.87
CPNE4-207ENST00000506687 NOP10Q9NPE3 64 aaKnown RBP3.39□□□□□ -1.87
CPNE4-207ENST00000506687 SCRT2Q9NQ03 307 aa3.39□□□□□ -1.87
CPNE4-207ENST00000506687 TIMM8BQ9Y5J9 83 aaPredicted RBP3.39□□□□□ -1.87
CPNE4-207ENST00000506687 DMBT1Q9UGM3 2413 aaPredicted RBP3.39□□□□□ -1.87
CPNE4-207ENST00000506687 NACAE9PAV3 2078 aa3.39□□□□□ -1.87
CPNE4-207ENST00000506687 IGLV8-61A0A075B6I0 122 aa3.38□□□□□ -1.87
CPNE4-207ENST00000506687 SMIM26A0A096LP01 95 aa3.38□□□□□ -1.87
CPNE4-207ENST00000506687 NUPR2A6NF83 97 aa3.38□□□□□ -1.87
CPNE4-207ENST00000506687 C9JCJ5 164 aa3.38□□□□□ -1.87
CPNE4-207ENST00000506687 SH2D1AO60880 128 aa3.38□□□□□ -1.87
CPNE4-207ENST00000506687 AKR1D1P51857 326 aa3.38□□□□□ -1.87
CPNE4-207ENST00000506687 PRR3P79522 188 aaKnown RBP3.38□□□□□ -1.87
CPNE4-207ENST00000506687 PEA15Q15121 130 aa3.38□□□□□ -1.87
CPNE4-207ENST00000506687 CENPWQ5EE01 88 aa3.38□□□□□ -1.87
CPNE4-207ENST00000506687 FAM162BQ5T6X4 162 aa3.38□□□□□ -1.87
CPNE4-207ENST00000506687 Q6ZTI0 123 aa3.38□□□□□ -1.87
CPNE4-207ENST00000506687 POM121L12Q8N7R1 296 aa3.38□□□□□ -1.87
CPNE4-207ENST00000506687 KCNS1Q96KK3 526 aa3.38□□□□□ -1.87
CPNE4-207ENST00000506687 LY96Q9Y6Y9 160 aa3.38□□□□□ -1.87
CPNE4-207ENST00000506687 DNAH2Q9P225 4427 aa3.38□□□□□ -1.87
CPNE4-207ENST00000506687 DEFB131BA0A096LNP1 70 aa3.37□□□□□ -1.87
CPNE4-207ENST00000506687 TRAV10A0A0B4J240 114 aa3.37□□□□□ -1.87
CPNE4-207ENST00000506687 TRAV8-6A0A0B4J262 113 aa3.37□□□□□ -1.87
CPNE4-207ENST00000506687 IGHV3OR16-9A0A0B4J2B5 98 aa3.37□□□□□ -1.87
CPNE4-207ENST00000506687 H0Y9J4 135 aa3.37□□□□□ -1.87
CPNE4-207ENST00000506687 M0R2P5 195 aa3.37□□□□□ -1.87
CPNE4-207ENST00000506687 TCAPO15273 167 aa3.37□□□□□ -1.87
CPNE4-207ENST00000506687 CXCL1P09341 107 aa3.37□□□□□ -1.87
CPNE4-207ENST00000506687 CHTF8P0CG12 524 aa3.37□□□□□ -1.87
CPNE4-207ENST00000506687 INAFM2P0DMQ5 153 aa3.37□□□□□ -1.87
CPNE4-207ENST00000506687 DEFB130BP0DP73 79 aa3.37□□□□□ -1.87
CPNE4-207ENST00000506687 DEFB130AP0DP74 79 aa3.37□□□□□ -1.87
CPNE4-207ENST00000506687 RAB4BP61018 213 aa3.37□□□□□ -1.87
CPNE4-207ENST00000506687 DAD1P61803 113 aa3.37□□□□□ -1.87
CPNE4-207ENST00000506687 SMAGPQ0VAQ4 97 aa3.37□□□□□ -1.87
CPNE4-207ENST00000506687 RHEBQ15382 184 aa3.37□□□□□ -1.87
CPNE4-207ENST00000506687 EIF5A2Q9GZV4 153 aaKnown RBP3.37□□□□□ -1.87
CPNE4-207ENST00000506687 SDF2L1Q9HCN8 221 aa3.37□□□□□ -1.87
CPNE4-207ENST00000506687 IL36BQ9NZH7 164 aa3.37□□□□□ -1.87
CPNE4-207ENST00000506687 APLNQ9ULZ1 77 aa3.37□□□□□ -1.87
CPNE4-207ENST00000506687 TRGV1A0A0A0MS02 117 aa3.36□□□□□ -1.87
CPNE4-207ENST00000506687 A0A0J9YXV3 536 aa3.36□□□□□ -1.87
CPNE4-207ENST00000506687 COLCA2A8K830 154 aa3.36□□□□□ -1.87
CPNE4-207ENST00000506687 B4DEV8 164 aa3.36□□□□□ -1.87
CPNE4-207ENST00000506687 IGKV2-30P06310 120 aa3.36□□□□□ -1.87
CPNE4-207ENST00000506687 GNG4P50150 75 aa3.36□□□□□ -1.87
CPNE4-207ENST00000506687 KRTAP10-2P60368 255 aa3.36□□□□□ -1.87
CPNE4-207ENST00000506687 RPL19P84098 196 aaKnown RBP3.36□□□□□ -1.87
CPNE4-207ENST00000506687 FAM231DQ6ZW35 169 aa3.36□□□□□ -1.87
CPNE4-207ENST00000506687 LINC01551Q86U37 167 aa3.36□□□□□ -1.87
CPNE4-207ENST00000506687 VSIG2Q96IQ7 327 aa3.36□□□□□ -1.87
CPNE4-207ENST00000506687 FAM210BQ96KR6 192 aa3.36□□□□□ -1.87
CPNE4-207ENST00000506687 MRPL16Q9NX20 251 aaKnown RBP3.36□□□□□ -1.87
CPNE4-207ENST00000506687 KLK5Q9Y337 293 aaPredicted RBP3.36□□□□□ -1.87
CPNE4-207ENST00000506687 RNF213Q63HN8 5207 aa3.35□□□□□ -1.87
CPNE4-207ENST00000506687 TGIF2-C20orf24A0A0A6YYL0 155 aa3.35□□□□□ -1.87
CPNE4-207ENST00000506687 GRIFINA4D1Z8 144 aa3.35□□□□□ -1.87
CPNE4-207ENST00000506687 ZNF727A8MUV8 499 aa3.35□□□□□ -1.87
CPNE4-207ENST00000506687 H3BNG1 76 aa3.35□□□□□ -1.87
CPNE4-207ENST00000506687 NDUFS5O43920 106 aa3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms