RNA–Protein interactions for RNA: ENST00000506197.2

SMIM20-201, Transcript of small integral membrane protein 20, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMIM20, Length 935 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM20-201ENST00000506197 FCER1GP30273 86 aa13.82□□□□□ -0.2
SMIM20-201ENST00000506197 MRPS16Q9Y3D3 137 aaKnown RBP13.82□□□□□ -0.2
SMIM20-201ENST00000506197 LINC00588Q9Y4M8 146 aa13.82□□□□□ -0.2
SMIM20-201ENST00000506197 TRBV25-1A0A075B6N4 114 aa13.81□□□□□ -0.2
SMIM20-201ENST00000506197 TRBV6-8A0A0A6YYG3 113 aa13.81□□□□□ -0.2
SMIM20-201ENST00000506197 TRAV8-6A0A0B4J262 113 aa13.81□□□□□ -0.2
SMIM20-201ENST00000506197 IGHV1-24A0A0C4DH33 117 aa13.81□□□□□ -0.2
SMIM20-201ENST00000506197 PRSS47A8MTI9 375 aa13.81□□□□□ -0.2
SMIM20-201ENST00000506197 DEFB104AQ8WTQ1 72 aa13.81□□□□□ -0.2
SMIM20-201ENST00000506197 TCAPO15273 167 aa13.8□□□□□ -0.2
SMIM20-201ENST00000506197 AMTP48728 403 aa13.8□□□□□ -0.2
SMIM20-201ENST00000506197 Q8N8P6 123 aa13.8□□□□□ -0.2
SMIM20-201ENST00000506197 NXT2Q9NPJ8 142 aaKnown RBP13.8□□□□□ -0.2
SMIM20-201ENST00000506197 TSHBP01222 138 aa13.79□□□□□ -0.2
SMIM20-201ENST00000506197 NTM-AS1Q6ZSK4 140 aa13.79□□□□□ -0.2
SMIM20-201ENST00000506197 PRSS3P2Q8NHM4 247 aa13.79□□□□□ -0.2
SMIM20-201ENST00000506197 C18orf32Q8TCD1 76 aa13.78□□□□□ -0.2
SMIM20-201ENST00000506197 IFI27P40305 119 aaPredicted RBP13.77□□□□□ -0.21
SMIM20-201ENST00000506197 IQCJQ1A5X6 159 aa13.77□□□□□ -0.21
SMIM20-201ENST00000506197 CHCHD5Q9BSY4 110 aa13.77□□□□□ -0.21
SMIM20-201ENST00000506197 TMEM243Q9BU79 118 aa13.77□□□□□ -0.21
SMIM20-201ENST00000506197 IGLV2-18A0A075B6J9 118 aa13.76□□□□□ -0.21
SMIM20-201ENST00000506197 FA2HQ7L5A8 372 aa13.76□□□□□ -0.21
SMIM20-201ENST00000506197 UPK3BQ9BT76 320 aa13.76□□□□□ -0.21
SMIM20-201ENST00000506197 HECTD4Q9Y4D8 3996 aa13.75□□□□□ -0.21
SMIM20-201ENST00000506197 UBE2L6O14933 153 aa13.75□□□□□ -0.21
SMIM20-201ENST00000506197 K7EMI3 77 aa13.74□□□□□ -0.21
SMIM20-201ENST00000506197 RAB5BP61020 215 aa13.74□□□□□ -0.21
SMIM20-201ENST00000506197 PKIAP61925 76 aa13.74□□□□□ -0.21
SMIM20-201ENST00000506197 WFDC10BQ8IUB3 73 aa13.74□□□□□ -0.21
SMIM20-201ENST00000506197 C1orf196B1AJZ1 125 aa13.73□□□□□ -0.21
SMIM20-201ENST00000506197 SIVA1O15304 175 aa13.73□□□□□ -0.21
SMIM20-201ENST00000506197 TMEM262E9PQX1 116 aa13.72□□□□□ -0.21
SMIM20-201ENST00000506197 GAGE6Q13070 117 aa13.72□□□□□ -0.21
SMIM20-201ENST00000506197 LAGE3Q14657 143 aa13.72□□□□□ -0.21
SMIM20-201ENST00000506197 ORMDL2Q53FV1 153 aa13.72□□□□□ -0.21
SMIM20-201ENST00000506197 BAGE3Q86Y29 109 aa13.72□□□□□ -0.21
SMIM20-201ENST00000506197 TMEM18Q96B42 140 aa13.72□□□□□ -0.21
SMIM20-201ENST00000506197 CHCHD7Q9BUK0 85 aa13.72□□□□□ -0.21
SMIM20-201ENST00000506197 A0A087WX48 190 aa13.71□□□□□ -0.21
SMIM20-201ENST00000506197 ESDP10768 282 aa13.71□□□□□ -0.21
SMIM20-201ENST00000506197 RNASEKQ6P5S7 137 aaKnown RBP13.71□□□□□ -0.21
SMIM20-201ENST00000506197 Q9H8V8 135 aa13.71□□□□□ -0.21
SMIM20-201ENST00000506197 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.7□□□□□ -0.22
SMIM20-201ENST00000506197 IGKV2-29A2NJV5 120 aaPredicted RBP13.7□□□□□ -0.22
SMIM20-201ENST00000506197 H7C423 109 aa13.7□□□□□ -0.22
SMIM20-201ENST00000506197 Q0VG73 95 aa13.7□□□□□ -0.22
SMIM20-201ENST00000506197 NIT1Q86X76 327 aa13.7□□□□□ -0.22
SMIM20-201ENST00000506197 AP5S1Q9NUS5 200 aa13.7□□□□□ -0.22
SMIM20-201ENST00000506197 HIST1H2BKO60814 126 aa13.69□□□□□ -0.22
SMIM20-201ENST00000506197 HIST1H2BJP06899 126 aa13.69□□□□□ -0.22
SMIM20-201ENST00000506197 LINC00614P0C842 121 aa13.69□□□□□ -0.22
SMIM20-201ENST00000506197 HIST1H2BOP23527 126 aa13.69□□□□□ -0.22
SMIM20-201ENST00000506197 G0S2P27469 103 aa13.69□□□□□ -0.22
SMIM20-201ENST00000506197 HIST1H2BBP33778 126 aa13.69□□□□□ -0.22
SMIM20-201ENST00000506197 HIST1H2BDP58876 126 aa13.69□□□□□ -0.22
SMIM20-201ENST00000506197 HIST1H2BCP62807 126 aa13.69□□□□□ -0.22
SMIM20-201ENST00000506197 SMAGPQ0VAQ4 97 aa13.69□□□□□ -0.22
SMIM20-201ENST00000506197 HIST2H2BEQ16778 126 aa13.69□□□□□ -0.22
SMIM20-201ENST00000506197 HIST2H2BFQ5QNW6 126 aaPredicted RBP13.69□□□□□ -0.22
SMIM20-201ENST00000506197 AMMECR1LQ6DCA0 310 aa13.69□□□□□ -0.22
SMIM20-201ENST00000506197 C20orf203Q8NBC4 194 aa13.69□□□□□ -0.22
SMIM20-201ENST00000506197 HIST1H2BHQ93079 126 aa13.69□□□□□ -0.22
SMIM20-201ENST00000506197 HIST1H2BNQ99877 126 aa13.69□□□□□ -0.22
SMIM20-201ENST00000506197 HIST1H2BMQ99879 126 aa13.69□□□□□ -0.22
SMIM20-201ENST00000506197 LINC01546A6NGU7 62 aa13.68□□□□□ -0.22
SMIM20-201ENST00000506197 DNAH10OSP0CZ25 163 aa13.68□□□□□ -0.22
SMIM20-201ENST00000506197 IGHV3-30P01768 117 aa13.67□□□□□ -0.22
SMIM20-201ENST00000506197 IGHV3-33P01772 117 aa13.67□□□□□ -0.22
SMIM20-201ENST00000506197 IGHV3-30-3P0DP02 117 aa13.67□□□□□ -0.22
SMIM20-201ENST00000506197 IGHV3-30-5P0DP03 117 aa13.67□□□□□ -0.22
SMIM20-201ENST00000506197 LINC01556Q5JQF7 62 aa13.67□□□□□ -0.22
SMIM20-201ENST00000506197 TRAV9-2A0A087WT02 112 aa13.66□□□□□ -0.22
SMIM20-201ENST00000506197 BTF3P20290 206 aaKnown RBP13.66□□□□□ -0.22
SMIM20-201ENST00000506197 MPV17L2Q567V2 206 aa13.66□□□□□ -0.22
SMIM20-201ENST00000506197 CHCHD1Q96BP2 118 aaKnown RBP13.66□□□□□ -0.22
SMIM20-201ENST00000506197 URB1-AS1Q96HZ7 61 aa13.66□□□□□ -0.22
SMIM20-201ENST00000506197 CYSLTR1Q9Y271 337 aa13.66□□□□□ -0.22
SMIM20-201ENST00000506197 FGF6P10767 208 aa13.65□□□□□ -0.22
SMIM20-201ENST00000506197 TMEM101Q96IK0 257 aa13.65□□□□□ -0.22
SMIM20-201ENST00000506197 ZNF25P17030 456 aaPredicted RBP13.64□□□□□ -0.23
SMIM20-201ENST00000506197 RBX1P62877 108 aa13.64□□□□□ -0.23
SMIM20-201ENST00000506197 RPL39P62891 51 aaKnown RBP13.64□□□□□ -0.23
SMIM20-201ENST00000506197 DGAT2L7PQ6IED9 249 aa13.64□□□□□ -0.23
SMIM20-201ENST00000506197 C2orf66Q6UXQ4 117 aa13.64□□□□□ -0.23
SMIM20-201ENST00000506197 HSBP1O75506 76 aa13.63□□□□□ -0.23
SMIM20-201ENST00000506197 TTC32Q5I0X7 151 aa13.63□□□□□ -0.23
SMIM20-201ENST00000506197 MRPL52Q86TS9 123 aaKnown RBP13.63□□□□□ -0.23
SMIM20-201ENST00000506197 Q8N3U1 123 aa13.63□□□□□ -0.23
SMIM20-201ENST00000506197 C10orf126Q8N4M7 172 aa13.63□□□□□ -0.23
SMIM20-201ENST00000506197 OR5A1Q8NGJ0 315 aa13.63□□□□□ -0.23
SMIM20-201ENST00000506197 A0A1B0GUV1 79 aa13.62□□□□□ -0.23
SMIM20-201ENST00000506197 K7EP13 123 aa13.62□□□□□ -0.23
SMIM20-201ENST00000506197 SERF1AO75920 110 aa13.62□□□□□ -0.23
SMIM20-201ENST00000506197 Q8N976 141 aa13.62□□□□□ -0.23
SMIM20-201ENST00000506197 DNAH2Q9P225 4427 aa13.61□□□□□ -0.23
SMIM20-201ENST00000506197 NBDYA0A0U1RRE5 68 aa13.61□□□□□ -0.23
SMIM20-201ENST00000506197 LINC01549A6NIU2 74 aa13.61□□□□□ -0.23
SMIM20-201ENST00000506197 ANGP03950 147 aaKnown RBP13.61□□□□□ -0.23
SMIM20-201ENST00000506197 TIMM21Q9BVV7 248 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms