RNA–Protein interactions for RNA: ENST00000506018.5

NR1I3-222, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best)

Gene NR1I3, Length 1,380 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-222ENST00000506018 PCLOQ9Y6V0 5065 aa7.01□□□□□ -1.29
NR1I3-222ENST00000506018 TRAV8-3A0A0A6YYJ7 113 aa7.01□□□□□ -1.29
NR1I3-222ENST00000506018 COLCA2A8K830 154 aa7.01□□□□□ -1.29
NR1I3-222ENST00000506018 RAB5AP20339 215 aa7.01□□□□□ -1.29
NR1I3-222ENST00000506018 RPS10P46783 165 aaKnown RBP7.01□□□□□ -1.29
NR1I3-222ENST00000506018 SREK1IP1Q8N9Q2 155 aaPredicted RBP7.01□□□□□ -1.29
NR1I3-222ENST00000506018 GATD1Q8NB37 220 aa7.01□□□□□ -1.29
NR1I3-222ENST00000506018 TRAPPC1Q9Y5R8 145 aa7.01□□□□□ -1.29
NR1I3-222ENST00000506018 HSPG2P98160 4391 aa7□□□□□ -1.29
NR1I3-222ENST00000506018 IGLV5-52A0A0A0MRZ9 124 aa7□□□□□ -1.29
NR1I3-222ENST00000506018 H7C1H1 209 aa7□□□□□ -1.29
NR1I3-222ENST00000506018 PPP1R17O96001 155 aa7□□□□□ -1.29
NR1I3-222ENST00000506018 GCSHP23434 173 aa7□□□□□ -1.29
NR1I3-222ENST00000506018 C14orf178Q8N769 122 aaPredicted RBP7□□□□□ -1.29
NR1I3-222ENST00000506018 COX11Q9Y6N1 276 aa7□□□□□ -1.29
NR1I3-222ENST00000506018 TRBV10-1A0A0K0K1A3 114 aa6.99□□□□□ -1.29
NR1I3-222ENST00000506018 EPM2AB3EWF7 344 aa6.99□□□□□ -1.29
NR1I3-222ENST00000506018 F5H697 171 aa6.99□□□□□ -1.29
NR1I3-222ENST00000506018 APCSP02743 223 aa6.99□□□□□ -1.29
NR1I3-222ENST00000506018 PPBPP02775 128 aa6.99□□□□□ -1.29
NR1I3-222ENST00000506018 LINC00694P0DN24 101 aa6.99□□□□□ -1.29
NR1I3-222ENST00000506018 RPL36AP83881 106 aaKnown RBP6.99□□□□□ -1.29
NR1I3-222ENST00000506018 FABP9Q0Z7S8 132 aa6.99□□□□□ -1.29
NR1I3-222ENST00000506018 FAM104BQ5XKR9 115 aa6.99□□□□□ -1.29
NR1I3-222ENST00000506018 UFSP1Q6NVU6 142 aa6.99□□□□□ -1.29
NR1I3-222ENST00000506018 TMEM136Q6ZRR5 245 aa6.99□□□□□ -1.29
NR1I3-222ENST00000506018 Q6ZSN1 163 aa6.99□□□□□ -1.29
NR1I3-222ENST00000506018 RPL36ALQ969Q0 106 aaKnown RBP6.99□□□□□ -1.29
NR1I3-222ENST00000506018 RMI2Q96E14 147 aa6.99□□□□□ -1.29
NR1I3-222ENST00000506018 MRAP2Q96G30 205 aa6.99□□□□□ -1.29
NR1I3-222ENST00000506018 SAMD10Q9BYL1 202 aa6.99□□□□□ -1.29
NR1I3-222ENST00000506018 KRTAP4-5Q9BYR2 181 aa6.99□□□□□ -1.29
NR1I3-222ENST00000506018 JPT2Q9H910 190 aa6.99□□□□□ -1.29
NR1I3-222ENST00000506018 DNAH5Q8TE73 4624 aa6.98□□□□□ -1.29
NR1I3-222ENST00000506018 A0A087WWL8 130 aa6.98□□□□□ -1.29
NR1I3-222ENST00000506018 MGPP08493 103 aa6.98□□□□□ -1.29
NR1I3-222ENST00000506018 FUSP35637 526 aaKnown RBP eCLIP6.98□□□□□ -1.29
NR1I3-222ENST00000506018 ZNF56Q15929 161 aa6.98□□□□□ -1.29
NR1I3-222ENST00000506018 Q8N814 137 aa6.98□□□□□ -1.29
NR1I3-222ENST00000506018 TRBV7-3A0A075B6L6 115 aa6.97□□□□□ -1.29
NR1I3-222ENST00000506018 A0A087WX48 190 aa6.97□□□□□ -1.29
NR1I3-222ENST00000506018 RAB4AP20338 218 aa6.97□□□□□ -1.29
NR1I3-222ENST00000506018 CKS2P33552 79 aa6.97□□□□□ -1.29
NR1I3-222ENST00000506018 ORMDL3Q8N138 153 aa6.97□□□□□ -1.29
NR1I3-222ENST00000506018 CHCHD7Q9BUK0 85 aa6.97□□□□□ -1.29
NR1I3-222ENST00000506018 LAMTOR2Q9Y2Q5 125 aa6.97□□□□□ -1.29
NR1I3-222ENST00000506018 LRCOL1A6NCL2 159 aa6.96□□□□□ -1.29
NR1I3-222ENST00000506018 C1orf196B1AJZ1 125 aa6.96□□□□□ -1.29
NR1I3-222ENST00000506018 KRTAP10-1P60331 282 aa6.96□□□□□ -1.29
NR1I3-222ENST00000506018 AMN1Q8IY45 258 aa6.96□□□□□ -1.29
NR1I3-222ENST00000506018 KIF25-AS1Q9Y6Z4 181 aa6.96□□□□□ -1.29
NR1I3-222ENST00000506018 APOBP04114 4563 aaKnown RBP6.96□□□□□ -1.3
NR1I3-222ENST00000506018 PKIAP61925 76 aa6.95□□□□□ -1.3
NR1I3-222ENST00000506018 MRPL51Q4U2R6 128 aaKnown RBP6.95□□□□□ -1.3
NR1I3-222ENST00000506018 DAZ4Q86SG3 579 aaKnown RBP6.95□□□□□ -1.3
NR1I3-222ENST00000506018 TMEM70Q9BUB7 260 aa6.95□□□□□ -1.3
NR1I3-222ENST00000506018 DAZ3Q9NR90 486 aaKnown RBP6.95□□□□□ -1.3
NR1I3-222ENST00000506018 PHOX2AO14813 284 aa6.95□□□□□ -1.3
NR1I3-222ENST00000506018 TRGC2P03986 189 aa6.95□□□□□ -1.3
NR1I3-222ENST00000506018 XGP55808 180 aa6.95□□□□□ -1.3
NR1I3-222ENST00000506018 RAB5BP61020 215 aa6.95□□□□□ -1.3
NR1I3-222ENST00000506018 Q0VG73 95 aa6.95□□□□□ -1.3
NR1I3-222ENST00000506018 TMEM97Q5BJF2 176 aa6.95□□□□□ -1.3
NR1I3-222ENST00000506018 NIT1Q86X76 327 aa6.95□□□□□ -1.3
NR1I3-222ENST00000506018 RNF185Q96GF1 192 aa6.95□□□□□ -1.3
NR1I3-222ENST00000506018 DNAJC30Q96LL9 226 aa6.95□□□□□ -1.3
NR1I3-222ENST00000506018 IGKV2D-24A0A075B6R9 120 aa6.94□□□□□ -1.3
NR1I3-222ENST00000506018 D6R8Y8 96 aa6.94□□□□□ -1.3
NR1I3-222ENST00000506018 TMEM262E9PQX1 116 aa6.94□□□□□ -1.3
NR1I3-222ENST00000506018 UBE2D3P61077 147 aa6.94□□□□□ -1.3
NR1I3-222ENST00000506018 UBE2D2P62837 147 aa6.94□□□□□ -1.3
NR1I3-222ENST00000506018 SUMO4Q6EEV6 95 aa6.94□□□□□ -1.3
NR1I3-222ENST00000506018 PRELID3AQ96N28 172 aa6.94□□□□□ -1.3
NR1I3-222ENST00000506018 NIT2Q9NQR4 276 aa6.94□□□□□ -1.3
NR1I3-222ENST00000506018 Q9UF83 564 aa6.94□□□□□ -1.3
NR1I3-222ENST00000506018 ABCA13Q86UQ4 5058 aa6.93□□□□□ -1.3
NR1I3-222ENST00000506018 CRPP02741 224 aa6.93□□□□□ -1.3
NR1I3-222ENST00000506018 KIAA1644Q3SXP7 199 aa6.93□□□□□ -1.3
NR1I3-222ENST00000506018 Q5VSD8 79 aa6.93□□□□□ -1.3
NR1I3-222ENST00000506018 Q8N3U1 123 aa6.93□□□□□ -1.3
NR1I3-222ENST00000506018 Q8N976 141 aa6.93□□□□□ -1.3
NR1I3-222ENST00000506018 UBE2WQ96B02 151 aa6.93□□□□□ -1.3
NR1I3-222ENST00000506018 C20orf78Q9BR46 151 aa6.93□□□□□ -1.3
NR1I3-222ENST00000506018 MAP1LC3AQ9H492 121 aa6.93□□□□□ -1.3
NR1I3-222ENST00000506018 KLK12Q9UKR0 248 aa6.93□□□□□ -1.3
NR1I3-222ENST00000506018 TRBV6-8A0A0A6YYG3 113 aa6.92□□□□□ -1.3
NR1I3-222ENST00000506018 M0QY20 66 aa6.92□□□□□ -1.3
NR1I3-222ENST00000506018 TCAPO15273 167 aa6.92□□□□□ -1.3
NR1I3-222ENST00000506018 INAFM2P0DMQ5 153 aa6.92□□□□□ -1.3
NR1I3-222ENST00000506018 NEXN-AS1Q8NBZ9 246 aa6.92□□□□□ -1.3
NR1I3-222ENST00000506018 ALKBH7Q9BT30 221 aaPredicted RBP6.92□□□□□ -1.3
NR1I3-222ENST00000506018 ST20Q9HBF5 79 aa6.92□□□□□ -1.3
NR1I3-222ENST00000506018 TRAV26-2A0A0B4J265 109 aa6.91□□□□□ -1.3
NR1I3-222ENST00000506018 TRBV6-5A0A0K0K1A5 114 aa6.91□□□□□ -1.3
NR1I3-222ENST00000506018 TNFRSF6BO95407 300 aa6.91□□□□□ -1.3
NR1I3-222ENST00000506018 PMCHP20382 165 aa6.91□□□□□ -1.3
NR1I3-222ENST00000506018 SUMO2P61956 95 aaKnown RBP6.91□□□□□ -1.3
NR1I3-222ENST00000506018 C14orf177Q52M58 125 aa6.91□□□□□ -1.3
NR1I3-222ENST00000506018 CHCHD5Q9BSY4 110 aa6.91□□□□□ -1.3
NR1I3-222ENST00000506018 C1orf43Q9BWL3 253 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms