RNA–Protein interactions for RNA: ENST00000505346.5

SMN2-205, Transcript of survival of motor neuron 2, centromeric, humanhuman

TSL 3

Gene SMN2, Length 707 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-205ENST00000505346 NBASA2RRP1 2371 aa-1.12□□□□□ -2.59
SMN2-205ENST00000505346 PKD1L2Q7Z442 2459 aa-1.12□□□□□ -2.59
SMN2-205ENST00000505346 BCL9LQ86UU0 1499 aa-1.12□□□□□ -2.59
SMN2-205ENST00000505346 EYSQ5T1H1 3165 aa-1.12□□□□□ -2.59
SMN2-205ENST00000505346 VPS13DQ5THJ4 4388 aa-1.12□□□□□ -2.59
SMN2-205ENST00000505346 BORCS7-ASMTA0A0B4J1R7 106 aa-1.13□□□□□ -2.59
SMN2-205ENST00000505346 E5RI56 91 aa-1.13□□□□□ -2.59
SMN2-205ENST00000505346 RBP4P02753 201 aa-1.13□□□□□ -2.59
SMN2-205ENST00000505346 TMEM244Q5VVB8 128 aa-1.13□□□□□ -2.59
SMN2-205ENST00000505346 ATP11AUNQ6ZP68 121 aa-1.13□□□□□ -2.59
SMN2-205ENST00000505346 OR8I2Q8N0Y5 310 aa-1.13□□□□□ -2.59
SMN2-205ENST00000505346 SPRR2FQ96RM1 72 aa-1.13□□□□□ -2.59
SMN2-205ENST00000505346 WFDC6Q9BQY6 131 aa-1.13□□□□□ -2.59
SMN2-205ENST00000505346 PRKDCP78527 4128 aaKnown RBP-1.13□□□□□ -2.59
SMN2-205ENST00000505346 IBTKQ9P2D0 1353 aaPredicted RBP-1.13□□□□□ -2.59
SMN2-205ENST00000505346 ITPR2Q14571 2701 aa-1.13□□□□□ -2.59
SMN2-205ENST00000505346 ERCC6Q03468 1493 aa-1.13□□□□□ -2.59
SMN2-205ENST00000505346 PBRM1Q86U86 1689 aa-1.13□□□□□ -2.59
SMN2-205ENST00000505346 CLPSL1A2RUU4 121 aa-1.14□□□□□ -2.59
SMN2-205ENST00000505346 LOC730098B7Z3J9 87 aa-1.14□□□□□ -2.59
SMN2-205ENST00000505346 CCDC179H3BU77 68 aa-1.14□□□□□ -2.59
SMN2-205ENST00000505346 K7EQZ3 153 aa-1.14□□□□□ -2.59
SMN2-205ENST00000505346 SMIM24O75264 130 aa-1.14□□□□□ -2.59
SMN2-205ENST00000505346 TOMM20LQ6UXN7 152 aa-1.14□□□□□ -2.59
SMN2-205ENST00000505346 C10orf82Q8WW14 230 aa-1.14□□□□□ -2.59
SMN2-205ENST00000505346 NDUFA12Q9UI09 145 aa-1.14□□□□□ -2.59
SMN2-205ENST00000505346 SPG11Q96JI7 2443 aa-1.14□□□□□ -2.59
SMN2-205ENST00000505346 KDM3BQ7LBC6 1761 aa-1.14□□□□□ -2.59
SMN2-205ENST00000505346 ANK3Q12955 4377 aaKnown RBP-1.14□□□□□ -2.59
SMN2-205ENST00000505346 C10orf71Q711Q0 1435 aa-1.15□□□□□ -2.59
SMN2-205ENST00000505346 J3KT08 172 aa-1.15□□□□□ -2.59
SMN2-205ENST00000505346 BCE1O60756 84 aa-1.15□□□□□ -2.59
SMN2-205ENST00000505346 LINC01545Q5VT33 79 aa-1.15□□□□□ -2.59
SMN2-205ENST00000505346 SMPXQ9UHP9 88 aa-1.15□□□□□ -2.59
SMN2-205ENST00000505346 SYNJ1O43426 1573 aa-1.16□□□□□ -2.59
SMN2-205ENST00000505346 M0R2P5 195 aa-1.16□□□□□ -2.6
SMN2-205ENST00000505346 PIN1P1O15428 100 aa-1.16□□□□□ -2.6
SMN2-205ENST00000505346 MT1HL1P0DM35 61 aa-1.16□□□□□ -2.6
SMN2-205ENST00000505346 SCN3BQ9NY72 215 aa-1.16□□□□□ -2.6
SMN2-205ENST00000505346 CHD7Q9P2D1 2997 aa-1.16□□□□□ -2.6
SMN2-205ENST00000505346 A0A1B0GV72 72 aa-1.17□□□□□ -2.6
SMN2-205ENST00000505346 SPCS1Q9Y6A9 102 aa-1.17□□□□□ -2.6
SMN2-205ENST00000505346 TSC2P49815 1807 aa-1.17□□□□□ -2.6
SMN2-205ENST00000505346 NBEAQ8NFP9 2946 aa-1.18□□□□□ -2.6
SMN2-205ENST00000505346 TRAV36DV7A0A075B6V5 113 aa-1.18□□□□□ -2.6
SMN2-205ENST00000505346 TNFSF15O95150 251 aa-1.18□□□□□ -2.6
SMN2-205ENST00000505346 UBE2D1P51668 147 aa-1.18□□□□□ -2.6
SMN2-205ENST00000505346 CFAP126Q5VTH2 177 aa-1.18□□□□□ -2.6
SMN2-205ENST00000505346 Q5VV11 94 aa-1.18□□□□□ -2.6
SMN2-205ENST00000505346 NPVFQ9HCQ7 196 aa-1.18□□□□□ -2.6
SMN2-205ENST00000505346 ZNF609O15014 1411 aa-1.18□□□□□ -2.6
SMN2-205ENST00000505346 KALRNO60229 2985 aa-1.18□□□□□ -2.6
SMN2-205ENST00000505346 LRP6O75581 1613 aa-1.18□□□□□ -2.6
SMN2-205ENST00000505346 RELNP78509 3460 aa-1.19□□□□□ -2.6
SMN2-205ENST00000505346 FXYD6-FXYD2A0A087WZ82 144 aa-1.19□□□□□ -2.6
SMN2-205ENST00000505346 YPEL1O60688 119 aa-1.19□□□□□ -2.6
SMN2-205ENST00000505346 S100GP29377 79 aa-1.19□□□□□ -2.6
SMN2-205ENST00000505346 TFAMQ00059 246 aaKnown RBP-1.19□□□□□ -2.6
SMN2-205ENST00000505346 LYSTQ99698 3801 aa-1.19□□□□□ -2.6
SMN2-205ENST00000505346 MYH8P13535 1937 aa-1.2□□□□□ -2.6
SMN2-205ENST00000505346 COL14A1Q05707 1796 aaKnown RBP-1.2□□□□□ -2.6
SMN2-205ENST00000505346 DNAH1Q9P2D7 4330 aa-1.2□□□□□ -2.6
SMN2-205ENST00000505346 FAM92AA1XBS5 289 aa-1.2□□□□□ -2.6
SMN2-205ENST00000505346 M0R129 80 aa-1.2□□□□□ -2.6
SMN2-205ENST00000505346 M0R2T5 61 aa-1.2□□□□□ -2.6
SMN2-205ENST00000505346 NPFFO15130 113 aa-1.2□□□□□ -2.6
SMN2-205ENST00000505346 RPS28P62857 69 aaKnown RBP-1.2□□□□□ -2.6
SMN2-205ENST00000505346 TP53AIP1Q9HCN2 124 aa-1.2□□□□□ -2.6
SMN2-205ENST00000505346 HIGD1AQ9Y241 93 aa-1.2□□□□□ -2.6
SMN2-205ENST00000505346 DMXL2Q8TDJ6 3036 aa-1.2□□□□□ -2.6
SMN2-205ENST00000505346 CDK5RAP2Q96SN8 1893 aa-1.2□□□□□ -2.6
SMN2-205ENST00000505346 SMG1Q96Q15 3661 aaKnown RBP-1.2□□□□□ -2.6
SMN2-205ENST00000505346 AKAP9Q99996 3911 aa-1.21□□□□□ -2.6
SMN2-205ENST00000505346 ACACBO00763 2458 aa-1.21□□□□□ -2.6
SMN2-205ENST00000505346 CMYA5Q8N3K9 4069 aa-1.21□□□□□ -2.6
SMN2-205ENST00000505346 ZZEF1O43149 2961 aa-1.21□□□□□ -2.6
SMN2-205ENST00000505346 CEP295Q9C0D2 2601 aa-1.21□□□□□ -2.6
SMN2-205ENST00000505346 FABP1P07148 127 aa-1.21□□□□□ -2.6
SMN2-205ENST00000505346 PIRTP0C851 137 aa-1.21□□□□□ -2.6
SMN2-205ENST00000505346 CMPK1P30085 196 aa-1.21□□□□□ -2.6
SMN2-205ENST00000505346 MT1HP80294 61 aa-1.21□□□□□ -2.6
SMN2-205ENST00000505346 C9orf116Q5BN46 136 aaPredicted RBP-1.21□□□□□ -2.6
SMN2-205ENST00000505346 MIC13Q5XKP0 118 aa-1.21□□□□□ -2.6
SMN2-205ENST00000505346 SPAG11AQ6PDA7 123 aa-1.21□□□□□ -2.6
SMN2-205ENST00000505346 BAGE3Q86Y29 109 aa-1.21□□□□□ -2.6
SMN2-205ENST00000505346 TCTE3Q8IZS6 198 aa-1.21□□□□□ -2.6
SMN2-205ENST00000505346 RPRMQ9NS64 109 aa-1.21□□□□□ -2.6
SMN2-205ENST00000505346 CFAP46Q8IYW2 2715 aa-1.21□□□□□ -2.6
SMN2-205ENST00000505346 MYH6P13533 1939 aa-1.21□□□□□ -2.6
SMN2-205ENST00000505346 UTP20O75691 2785 aaKnown RBP-1.22□□□□□ -2.6
SMN2-205ENST00000505346 A0A1B0GX51 115 aa-1.22□□□□□ -2.6
SMN2-205ENST00000505346 I3L2K1 104 aa-1.22□□□□□ -2.6
SMN2-205ENST00000505346 MT1BP07438 61 aa-1.22□□□□□ -2.6
SMN2-205ENST00000505346 SCTP09683 121 aa-1.22□□□□□ -2.6
SMN2-205ENST00000505346 VSTM2AQ8TAG5 236 aa-1.22□□□□□ -2.6
SMN2-205ENST00000505346 ERCC6L2Q5T890 1561 aa-1.22□□□□□ -2.61
SMN2-205ENST00000505346 VPS13BQ7Z7G8 4022 aa-1.22□□□□□ -2.61
SMN2-205ENST00000505346 PRDM2Q13029 1718 aa-1.23□□□□□ -2.61
SMN2-205ENST00000505346 MYO9AB2RTY4 2548 aa-1.23□□□□□ -2.61
SMN2-205ENST00000505346 PKD1P98161 4303 aa-1.23□□□□□ -2.61
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms