RNA–Protein interactions for RNA: ENST00000505199.5

SNCA-208, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 411 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-208ENST00000505199 TMEM136Q6ZRR5 245 aa8.46□□□□□ -1.06
SNCA-208ENST00000505199 C6orf223Q8N319 242 aa8.46□□□□□ -1.06
SNCA-208ENST00000505199 TMEM243Q9BU79 118 aa8.46□□□□□ -1.06
SNCA-208ENST00000505199 TRAV8-3A0A0A6YYJ7 113 aa8.45□□□□□ -1.06
SNCA-208ENST00000505199 APCSP02743 223 aa8.45□□□□□ -1.06
SNCA-208ENST00000505199 ZNF25P17030 456 aaPredicted RBP8.45□□□□□ -1.06
SNCA-208ENST00000505199 PMCHP20382 165 aa8.45□□□□□ -1.06
SNCA-208ENST00000505199 CHCHD5Q9BSY4 110 aa8.45□□□□□ -1.06
SNCA-208ENST00000505199 SMCO4Q9NRQ5 59 aa8.45□□□□□ -1.06
SNCA-208ENST00000505199 COX11Q9Y6N1 276 aa8.45□□□□□ -1.06
SNCA-208ENST00000505199 AMTP48728 403 aa8.44□□□□□ -1.06
SNCA-208ENST00000505199 PRELID3AQ96N28 172 aa8.44□□□□□ -1.06
SNCA-208ENST00000505199 SMIM2Q9BVW6 85 aa8.44□□□□□ -1.06
SNCA-208ENST00000505199 KRTAP1-5Q9BYS1 174 aa8.44□□□□□ -1.06
SNCA-208ENST00000505199 DNAH1Q9P2D7 4330 aa8.44□□□□□ -1.06
SNCA-208ENST00000505199 UBE2L6O14933 153 aa8.43□□□□□ -1.06
SNCA-208ENST00000505199 GAS8-AS1O95177 125 aa8.43□□□□□ -1.06
SNCA-208ENST00000505199 ESDP10768 282 aa8.43□□□□□ -1.06
SNCA-208ENST00000505199 Q0VG73 95 aa8.43□□□□□ -1.06
SNCA-208ENST00000505199 CSDC2Q9Y534 153 aaKnown RBP8.43□□□□□ -1.06
SNCA-208ENST00000505199 VPS13DQ5THJ4 4388 aa8.43□□□□□ -1.06
SNCA-208ENST00000505199 SMKR1H3BMG3 65 aa8.42□□□□□ -1.06
SNCA-208ENST00000505199 M0R2N4 97 aa8.42□□□□□ -1.06
SNCA-208ENST00000505199 TSHBP01222 138 aa8.42□□□□□ -1.06
SNCA-208ENST00000505199 ATRAIDQ6UW56 229 aa8.42□□□□□ -1.06
SNCA-208ENST00000505199 MRPL52Q86TS9 123 aaKnown RBP8.42□□□□□ -1.06
SNCA-208ENST00000505199 TMEM18Q96B42 140 aa8.42□□□□□ -1.06
SNCA-208ENST00000505199 YPEL4Q96NS1 127 aa8.42□□□□□ -1.06
SNCA-208ENST00000505199 MAP1LC3AQ9H492 121 aa8.42□□□□□ -1.06
SNCA-208ENST00000505199 TMEM262E9PQX1 116 aa8.41□□□□□ -1.06
SNCA-208ENST00000505199 NPYP01303 97 aa8.41□□□□□ -1.06
SNCA-208ENST00000505199 G0S2P27469 103 aa8.41□□□□□ -1.06
SNCA-208ENST00000505199 FCER1GP30273 86 aa8.41□□□□□ -1.06
SNCA-208ENST00000505199 RMI2Q96E14 147 aa8.41□□□□□ -1.06
SNCA-208ENST00000505199 TM2D2Q9BX73 214 aa8.41□□□□□ -1.06
SNCA-208ENST00000505199 NXT2Q9NPJ8 142 aaKnown RBP8.41□□□□□ -1.06
SNCA-208ENST00000505199 PRR34Q9NV39 138 aa8.41□□□□□ -1.06
SNCA-208ENST00000505199 SACSQ9NZJ4 4579 aa8.4□□□□□ -1.06
SNCA-208ENST00000505199 LINC01549A6NIU2 74 aa8.4□□□□□ -1.06
SNCA-208ENST00000505199 RBX1P62877 108 aa8.4□□□□□ -1.06
SNCA-208ENST00000505199 MIAQ16674 131 aa8.4□□□□□ -1.06
SNCA-208ENST00000505199 MPV17L2Q567V2 206 aa8.4□□□□□ -1.06
SNCA-208ENST00000505199 TIMM21Q9BVV7 248 aa8.4□□□□□ -1.06
SNCA-208ENST00000505199 DNAH6Q9C0G6 4158 aa8.4□□□□□ -1.07
SNCA-208ENST00000505199 TGIF2-C20orf24A0A0A6YYL0 155 aa8.39□□□□□ -1.07
SNCA-208ENST00000505199 TRAV8-4A0A0B4J246 113 aa8.39□□□□□ -1.07
SNCA-208ENST00000505199 RTL8CO15255 209 aa8.39□□□□□ -1.07
SNCA-208ENST00000505199 IGHV3-30P01768 117 aa8.39□□□□□ -1.07
SNCA-208ENST00000505199 IGHV3-33P01772 117 aa8.39□□□□□ -1.07
SNCA-208ENST00000505199 IGHV3-30-3P0DP02 117 aa8.39□□□□□ -1.07
SNCA-208ENST00000505199 IGHV3-30-5P0DP03 117 aa8.39□□□□□ -1.07
SNCA-208ENST00000505199 RAB5AP20339 215 aa8.39□□□□□ -1.07
SNCA-208ENST00000505199 Q6ZRN7 208 aaPredicted RBP8.39□□□□□ -1.07
SNCA-208ENST00000505199 MRPL18Q9H0U6 180 aaKnown RBP8.39□□□□□ -1.07
SNCA-208ENST00000505199 CRPP02741 224 aa8.38□□□□□ -1.07
SNCA-208ENST00000505199 NPSP0C0P6 89 aa8.38□□□□□ -1.07
SNCA-208ENST00000505199 FGF6P10767 208 aa8.38□□□□□ -1.07
SNCA-208ENST00000505199 ORMDL2Q53FV1 153 aa8.38□□□□□ -1.07
SNCA-208ENST00000505199 AMMECR1LQ6DCA0 310 aa8.38□□□□□ -1.07
SNCA-208ENST00000505199 Q8N8P6 123 aa8.38□□□□□ -1.07
SNCA-208ENST00000505199 ALKBH7Q9BT30 221 aaPredicted RBP8.38□□□□□ -1.07
SNCA-208ENST00000505199 TRAPPC1Q9Y5R8 145 aa8.38□□□□□ -1.07
SNCA-208ENST00000505199 RYR2Q92736 4967 aa8.38□□□□□ -1.07
SNCA-208ENST00000505199 HYDINQ4G0P3 5121 aa8.37□□□□□ -1.07
SNCA-208ENST00000505199 LINC01546A6NGU7 62 aa8.37□□□□□ -1.07
SNCA-208ENST00000505199 CCL25O15444 150 aa8.37□□□□□ -1.07
SNCA-208ENST00000505199 ANGP03950 147 aaKnown RBP8.37□□□□□ -1.07
SNCA-208ENST00000505199 S100A1P23297 94 aa8.37□□□□□ -1.07
SNCA-208ENST00000505199 FABP9Q0Z7S8 132 aa8.37□□□□□ -1.07
SNCA-208ENST00000505199 GAGE6Q13070 117 aa8.37□□□□□ -1.07
SNCA-208ENST00000505199 C20orf203Q8NBC4 194 aa8.37□□□□□ -1.07
SNCA-208ENST00000505199 TMEM101Q96IK0 257 aa8.37□□□□□ -1.07
SNCA-208ENST00000505199 KLK12Q9UKR0 248 aa8.37□□□□□ -1.07
SNCA-208ENST00000505199 REG3AQ06141 175 aa8.36□□□□□ -1.07
SNCA-208ENST00000505199 CBLN2Q8IUK8 224 aa8.36□□□□□ -1.07
SNCA-208ENST00000505199 Q8N976 141 aa8.36□□□□□ -1.07
SNCA-208ENST00000505199 SPANXA1Q9NS26 97 aa8.36□□□□□ -1.07
SNCA-208ENST00000505199 TMA7Q9Y2S6 64 aaKnown RBP8.36□□□□□ -1.07
SNCA-208ENST00000505199 PRSS29PA6NIE9 313 aa8.35□□□□□ -1.07
SNCA-208ENST00000505199 Q8N3U1 123 aa8.35□□□□□ -1.07
SNCA-208ENST00000505199 OR5A1Q8NGJ0 315 aa8.35□□□□□ -1.07
SNCA-208ENST00000505199 C1orf43Q9BWL3 253 aa8.35□□□□□ -1.07
SNCA-208ENST00000505199 PYGO1Q9Y3Y4 419 aa8.35□□□□□ -1.07
SNCA-208ENST00000505199 MRPS36P82909 103 aaKnown RBP8.34□□□□□ -1.07
SNCA-208ENST00000505199 DGAT2L7PQ6IED9 249 aa8.34□□□□□ -1.07
SNCA-208ENST00000505199 ENHOQ6UWT2 76 aa8.34□□□□□ -1.07
SNCA-208ENST00000505199 LINC00269Q8N2A0 174 aa8.34□□□□□ -1.07
SNCA-208ENST00000505199 UBE2WQ96B02 151 aa8.34□□□□□ -1.07
SNCA-208ENST00000505199 UBE2D4Q9Y2X8 147 aa8.34□□□□□ -1.07
SNCA-208ENST00000505199 RYR3Q15413 4870 aa8.33□□□□□ -1.08
SNCA-208ENST00000505199 IGLV4-60A0A075B6I1 120 aa8.33□□□□□ -1.08
SNCA-208ENST00000505199 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.33□□□□□ -1.08
SNCA-208ENST00000505199 IGKV2-29A2NJV5 120 aaPredicted RBP8.33□□□□□ -1.08
SNCA-208ENST00000505199 EREGO14944 169 aa8.33□□□□□ -1.08
SNCA-208ENST00000505199 PSCAO43653 123 aa8.33□□□□□ -1.08
SNCA-208ENST00000505199 RAB5BP61020 215 aa8.33□□□□□ -1.08
SNCA-208ENST00000505199 KIAA1644Q3SXP7 199 aa8.33□□□□□ -1.08
SNCA-208ENST00000505199 RNASEKQ6P5S7 137 aaKnown RBP8.33□□□□□ -1.08
SNCA-208ENST00000505199 ZNF664Q8N3J9 261 aa8.33□□□□□ -1.08
SNCA-208ENST00000505199 PRSS3P2Q8NHM4 247 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms