RNA–Protein interactions for RNA: ENST00000503346.1

PDLIM7-209, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 669 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-209ENST00000503346 LRCOL1A6NCL2 159 aa12.15□□□□□ -0.46
PDLIM7-209ENST00000503346 RPS10P46783 165 aaKnown RBP12.15□□□□□ -0.46
PDLIM7-209ENST00000503346 AMTP48728 403 aa12.15□□□□□ -0.46
PDLIM7-209ENST00000503346 KRTAP10-2P60368 255 aa12.15□□□□□ -0.46
PDLIM7-209ENST00000503346 RBX1P62877 108 aa12.15□□□□□ -0.46
PDLIM7-209ENST00000503346 Q8N976 141 aa12.15□□□□□ -0.46
PDLIM7-209ENST00000503346 UBE2WQ96B02 151 aa12.15□□□□□ -0.46
PDLIM7-209ENST00000503346 SEC11CQ9BY50 192 aa12.15□□□□□ -0.46
PDLIM7-209ENST00000503346 ST20Q9HBF5 79 aa12.15□□□□□ -0.46
PDLIM7-209ENST00000503346 KIAA1109Q2LD37 5005 aa12.14□□□□□ -0.47
PDLIM7-209ENST00000503346 I3L3M4 83 aa12.14□□□□□ -0.47
PDLIM7-209ENST00000503346 PPP1R17O96001 155 aa12.14□□□□□ -0.47
PDLIM7-209ENST00000503346 Q0VG73 95 aa12.14□□□□□ -0.47
PDLIM7-209ENST00000503346 MRPL51Q4U2R6 128 aaKnown RBP12.14□□□□□ -0.47
PDLIM7-209ENST00000503346 DEFB104AQ8WTQ1 72 aa12.14□□□□□ -0.47
PDLIM7-209ENST00000503346 RMI2Q96E14 147 aa12.14□□□□□ -0.47
PDLIM7-209ENST00000503346 TMEM70Q9BUB7 260 aa12.14□□□□□ -0.47
PDLIM7-209ENST00000503346 COX11Q9Y6N1 276 aa12.14□□□□□ -0.47
PDLIM7-209ENST00000503346 C16orf90A8MZG2 172 aa12.13□□□□□ -0.47
PDLIM7-209ENST00000503346 SMKR1H3BMG3 65 aa12.13□□□□□ -0.47
PDLIM7-209ENST00000503346 ANGP03950 147 aaKnown RBP12.13□□□□□ -0.47
PDLIM7-209ENST00000503346 POLR2KP53803 58 aaKnown RBP12.13□□□□□ -0.47
PDLIM7-209ENST00000503346 ENHOQ6UWT2 76 aa12.13□□□□□ -0.47
PDLIM7-209ENST00000503346 NRACQ8N912 160 aa12.13□□□□□ -0.47
PDLIM7-209ENST00000503346 A0A1B0GUV1 79 aa12.12□□□□□ -0.47
PDLIM7-209ENST00000503346 PMCHP20382 165 aa12.12□□□□□ -0.47
PDLIM7-209ENST00000503346 PRR34Q9NV39 138 aa12.12□□□□□ -0.47
PDLIM7-209ENST00000503346 PGPEP1Q9NXJ5 209 aa12.12□□□□□ -0.47
PDLIM7-209ENST00000503346 TRBV27A0A0K0K1C4 114 aa12.11□□□□□ -0.47
PDLIM7-209ENST00000503346 UBE2L6O14933 153 aa12.11□□□□□ -0.47
PDLIM7-209ENST00000503346 CRPP02741 224 aa12.11□□□□□ -0.47
PDLIM7-209ENST00000503346 APCSP02743 223 aa12.11□□□□□ -0.47
PDLIM7-209ENST00000503346 C10orf91Q5T1B1 145 aa12.11□□□□□ -0.47
PDLIM7-209ENST00000503346 CTDSP1Q9GZU7 261 aa12.11□□□□□ -0.47
PDLIM7-209ENST00000503346 HERC2O95714 4834 aa12.11□□□□□ -0.47
PDLIM7-209ENST00000503346 IGKV2D-24A0A075B6R9 120 aa12.1□□□□□ -0.47
PDLIM7-209ENST00000503346 TSHBP01222 138 aa12.1□□□□□ -0.47
PDLIM7-209ENST00000503346 MAPKAPK5-AS1Q8N8E1 139 aa12.1□□□□□ -0.47
PDLIM7-209ENST00000503346 C20orf203Q8NBC4 194 aa12.1□□□□□ -0.47
PDLIM7-209ENST00000503346 IMMP2LQ96T52 175 aa12.1□□□□□ -0.47
PDLIM7-209ENST00000503346 H7C423 109 aa12.09□□□□□ -0.47
PDLIM7-209ENST00000503346 CKS2P33552 79 aa12.09□□□□□ -0.47
PDLIM7-209ENST00000503346 SUMO2P61956 95 aaKnown RBP12.09□□□□□ -0.47
PDLIM7-209ENST00000503346 MIAQ16674 131 aa12.09□□□□□ -0.47
PDLIM7-209ENST00000503346 CDPF1Q6NVV7 123 aa12.09□□□□□ -0.47
PDLIM7-209ENST00000503346 LINC00269Q8N2A0 174 aa12.09□□□□□ -0.47
PDLIM7-209ENST00000503346 BTF3L4Q96K17 158 aa12.09□□□□□ -0.47
PDLIM7-209ENST00000503346 IGLV4-60A0A075B6I1 120 aa12.08□□□□□ -0.48
PDLIM7-209ENST00000503346 TRBV24-1A0A075B6N3 115 aa12.08□□□□□ -0.48
PDLIM7-209ENST00000503346 VCYO14598 125 aa12.08□□□□□ -0.48
PDLIM7-209ENST00000503346 ESDP10768 282 aa12.08□□□□□ -0.48
PDLIM7-209ENST00000503346 C20orf78Q9BR46 151 aa12.08□□□□□ -0.48
PDLIM7-209ENST00000503346 C1orf43Q9BWL3 253 aa12.08□□□□□ -0.48
PDLIM7-209ENST00000503346 TMEM242Q9NWH2 141 aa12.08□□□□□ -0.48
PDLIM7-209ENST00000503346 CARHSP1Q9Y2V2 147 aaKnown RBP12.08□□□□□ -0.48
PDLIM7-209ENST00000503346 RYR1P21817 5038 aa12.08□□□□□ -0.48
PDLIM7-209ENST00000503346 PPBPP02775 128 aa12.07□□□□□ -0.48
PDLIM7-209ENST00000503346 Q8N814 137 aa12.07□□□□□ -0.48
PDLIM7-209ENST00000503346 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.06□□□□□ -0.48
PDLIM7-209ENST00000503346 IGKV2-29A2NJV5 120 aaPredicted RBP12.06□□□□□ -0.48
PDLIM7-209ENST00000503346 D6R8Y8 96 aa12.06□□□□□ -0.48
PDLIM7-209ENST00000503346 RPL32P62910 135 aaKnown RBP12.06□□□□□ -0.48
PDLIM7-209ENST00000503346 REG3AQ06141 175 aa12.06□□□□□ -0.48
PDLIM7-209ENST00000503346 WFDC2Q14508 124 aa12.06□□□□□ -0.48
PDLIM7-209ENST00000503346 PHOX2AO14813 284 aa12.05□□□□□ -0.48
PDLIM7-209ENST00000503346 TNFRSF6BO95407 300 aa12.05□□□□□ -0.48
PDLIM7-209ENST00000503346 CLPSL2Q6UWE3 100 aa12.05□□□□□ -0.48
PDLIM7-209ENST00000503346 NTN5Q8WTR8 489 aaPredicted RBP12.05□□□□□ -0.48
PDLIM7-209ENST00000503346 BAALCQ8WXS3 180 aa12.05□□□□□ -0.48
PDLIM7-209ENST00000503346 FGF6P10767 208 aa12.04□□□□□ -0.48
PDLIM7-209ENST00000503346 FUSP35637 526 aaKnown RBP eCLIP12.04□□□□□ -0.48
PDLIM7-209ENST00000503346 AMMECR1LQ6DCA0 310 aa12.04□□□□□ -0.48
PDLIM7-209ENST00000503346 ORMDL3Q8N138 153 aa12.04□□□□□ -0.48
PDLIM7-209ENST00000503346 KIR2DL4Q99706 377 aa12.04□□□□□ -0.48
PDLIM7-209ENST00000503346 TRAV9-1A0A075B6T8 112 aa12.03□□□□□ -0.48
PDLIM7-209ENST00000503346 NPYP01303 97 aa12.03□□□□□ -0.48
PDLIM7-209ENST00000503346 ZNF25P17030 456 aaPredicted RBP12.03□□□□□ -0.48
PDLIM7-209ENST00000503346 KRTAP26-1Q6PEX3 210 aa12.03□□□□□ -0.48
PDLIM7-209ENST00000503346 TMEM136Q6ZRR5 245 aa12.03□□□□□ -0.48
PDLIM7-209ENST00000503346 APOBP04114 4563 aaKnown RBP12.03□□□□□ -0.48
PDLIM7-209ENST00000503346 TRAV8-4A0A0B4J246 113 aa12.02□□□□□ -0.49
PDLIM7-209ENST00000503346 C7orf77A4D0Y5 90 aa12.02□□□□□ -0.49
PDLIM7-209ENST00000503346 LECT2O14960 151 aa12.02□□□□□ -0.49
PDLIM7-209ENST00000503346 FCER1GP30273 86 aa12.02□□□□□ -0.49
PDLIM7-209ENST00000503346 RHEBQ15382 184 aa12.02□□□□□ -0.49
PDLIM7-209ENST00000503346 RNASEKQ6P5S7 137 aaKnown RBP12.02□□□□□ -0.49
PDLIM7-209ENST00000503346 CLRN3Q8NCR9 226 aa12.02□□□□□ -0.49
PDLIM7-209ENST00000503346 MRPL52Q86TS9 123 aaKnown RBP12.01□□□□□ -0.49
PDLIM7-209ENST00000503346 PRELID3AQ96N28 172 aa12.01□□□□□ -0.49
PDLIM7-209ENST00000503346 SMIM2Q9BVW6 85 aa12.01□□□□□ -0.49
PDLIM7-209ENST00000503346 IGLV5-52A0A0A0MRZ9 124 aa12□□□□□ -0.49
PDLIM7-209ENST00000503346 TCAPO15273 167 aa12□□□□□ -0.49
PDLIM7-209ENST00000503346 LAMTOR2Q9Y2Q5 125 aa12□□□□□ -0.49
PDLIM7-209ENST00000503346 CDK2AP2O75956 126 aa11.99□□□□□ -0.49
PDLIM7-209ENST00000503346 S100PP25815 95 aa11.99□□□□□ -0.49
PDLIM7-209ENST00000503346 TMEM101Q96IK0 257 aa11.99□□□□□ -0.49
PDLIM7-209ENST00000503346 IGLV10-54A0A075B6I4 117 aa11.98□□□□□ -0.49
PDLIM7-209ENST00000503346 HLA-DQA1P01909 254 aa11.98□□□□□ -0.49
PDLIM7-209ENST00000503346 OR5A1Q8NGJ0 315 aa11.98□□□□□ -0.49
PDLIM7-209ENST00000503346 RPS10P5Q9NQ39 176 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 82.7 ms