RNA–Protein interactions for RNA: ENST00000502820.1

HTT-202, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 287 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-202ENST00000502820 ATXN8Q156A1 80 aa3.83□□□□□ -1.8
HTT-202ENST00000502820 TMEM170BQ5T4T1 132 aa3.83□□□□□ -1.8
HTT-202ENST00000502820 AMTNQ6UX39 209 aa3.83□□□□□ -1.8
HTT-202ENST00000502820 ZNF491Q8N8L2 437 aa3.83□□□□□ -1.8
HTT-202ENST00000502820 PTH2Q96A98 100 aa3.83□□□□□ -1.8
HTT-202ENST00000502820 TMEM101Q96IK0 257 aa3.83□□□□□ -1.8
HTT-202ENST00000502820 UBE2E2Q96LR5 201 aa3.83□□□□□ -1.8
HTT-202ENST00000502820 WFDC10AQ9H1F0 79 aa3.83□□□□□ -1.8
HTT-202ENST00000502820 MRPL35Q9NZE8 188 aaKnown RBP3.83□□□□□ -1.8
HTT-202ENST00000502820 TIMM8BQ9Y5J9 83 aaPredicted RBP3.83□□□□□ -1.8
HTT-202ENST00000502820 LENEPQ9Y5L5 61 aa3.83□□□□□ -1.8
HTT-202ENST00000502820 SELENOKQ9Y6D0 94 aa3.83□□□□□ -1.8
HTT-202ENST00000502820 IGLV2-18A0A075B6J9 118 aa3.82□□□□□ -1.8
HTT-202ENST00000502820 TRAV8-2A0A0B4J237 113 aa3.82□□□□□ -1.8
HTT-202ENST00000502820 TRAV8-4A0A0B4J246 113 aa3.82□□□□□ -1.8
HTT-202ENST00000502820 LOC107984156A0A0G2JMH3 177 aa3.82□□□□□ -1.8
HTT-202ENST00000502820 A0A0J9YX75 114 aa3.82□□□□□ -1.8
HTT-202ENST00000502820 LOC389332A0A1B0GUA5 103 aa3.82□□□□□ -1.8
HTT-202ENST00000502820 J3KT08 172 aa3.82□□□□□ -1.8
HTT-202ENST00000502820 SLC25A20O43772 301 aa3.82□□□□□ -1.8
HTT-202ENST00000502820 SH2D1AO60880 128 aa3.82□□□□□ -1.8
HTT-202ENST00000502820 IGLV2-23P01705 113 aa3.82□□□□□ -1.8
HTT-202ENST00000502820 ORM1P02763 201 aa3.82□□□□□ -1.8
HTT-202ENST00000502820 CRYGBP07316 175 aa3.82□□□□□ -1.8
HTT-202ENST00000502820 CD7P09564 240 aa3.82□□□□□ -1.8
HTT-202ENST00000502820 SRSF9Q13242 221 aaKnown RBP eCLIP3.82□□□□□ -1.8
HTT-202ENST00000502820 ECSCRQ19T08 205 aa3.82□□□□□ -1.8
HTT-202ENST00000502820 MRGPRG-AS1Q2M3A8 158 aa3.82□□□□□ -1.8
HTT-202ENST00000502820 FAM106AQ4KMX7 169 aa3.82□□□□□ -1.8
HTT-202ENST00000502820 SCGB1D4Q6XE38 83 aa3.82□□□□□ -1.8
HTT-202ENST00000502820 NFE4Q86UQ8 179 aa3.82□□□□□ -1.8
HTT-202ENST00000502820 ARL17AQ8IVW1 177 aa3.82□□□□□ -1.8
HTT-202ENST00000502820 SMIM20Q8N5G0 67 aa3.82□□□□□ -1.8
HTT-202ENST00000502820 ANKRD29Q8N6D5 301 aa3.82□□□□□ -1.8
HTT-202ENST00000502820 OR13C6PQ8NH95 151 aa3.82□□□□□ -1.8
HTT-202ENST00000502820 TOMM6Q96B49 74 aa3.82□□□□□ -1.8
HTT-202ENST00000502820 TPSG1Q9NRR2 321 aa3.82□□□□□ -1.8
HTT-202ENST00000502820 PRO1854Q9UHT4 67 aa3.82□□□□□ -1.8
HTT-202ENST00000502820 HERC1Q15751 4861 aa3.82□□□□□ -1.8
HTT-202ENST00000502820 TRBV10-2A0A0K0K1G8 114 aa3.81□□□□□ -1.8
HTT-202ENST00000502820 A0A1B0GVY2 172 aa3.81□□□□□ -1.8
HTT-202ENST00000502820 SDHAF1A6NFY7 115 aa3.81□□□□□ -1.8
HTT-202ENST00000502820 ZNF815PA8K554 130 aa3.81□□□□□ -1.8
HTT-202ENST00000502820 C16orf90A8MZG2 172 aa3.81□□□□□ -1.8
HTT-202ENST00000502820 H3BMM0 161 aa3.81□□□□□ -1.8
HTT-202ENST00000502820 M0R2P5 195 aa3.81□□□□□ -1.8
HTT-202ENST00000502820 UQCRQO14949 82 aa3.81□□□□□ -1.8
HTT-202ENST00000502820 DUSP14O95147 198 aaKnown RBP3.81□□□□□ -1.8
HTT-202ENST00000502820 IGLV1-51P01701 117 aa3.81□□□□□ -1.8
HTT-202ENST00000502820 COX6CP09669 75 aa3.81□□□□□ -1.8
HTT-202ENST00000502820 MYOD1P15172 320 aa3.81□□□□□ -1.8
HTT-202ENST00000502820 CXCL5P42830 114 aa3.81□□□□□ -1.8
HTT-202ENST00000502820 PSMB2P49721 201 aa3.81□□□□□ -1.8
HTT-202ENST00000502820 SMCPP49901 116 aaPredicted RBP3.81□□□□□ -1.8
HTT-202ENST00000502820 LYZP61626 148 aa3.81□□□□□ -1.8
HTT-202ENST00000502820 C15orf53Q8NAA6 179 aa3.81□□□□□ -1.8
HTT-202ENST00000502820 UBE2WQ96B02 151 aa3.81□□□□□ -1.8
HTT-202ENST00000502820 RNF125Q96EQ8 232 aa3.81□□□□□ -1.8
HTT-202ENST00000502820 RNF185Q96GF1 192 aa3.81□□□□□ -1.8
HTT-202ENST00000502820 TMEM141Q96I45 108 aa3.81□□□□□ -1.8
HTT-202ENST00000502820 C18orf15Q96N68 181 aa3.81□□□□□ -1.8
HTT-202ENST00000502820 SMIM2Q9BVW6 85 aa3.81□□□□□ -1.8
HTT-202ENST00000502820 TPPP3Q9BW30 176 aa3.81□□□□□ -1.8
HTT-202ENST00000502820 TRBV30A0A0K0K1B3 111 aa3.8□□□□□ -1.8
HTT-202ENST00000502820 C11orf86A6NJI1 115 aa3.8□□□□□ -1.8
HTT-202ENST00000502820 CGB1A6NKQ9 187 aa3.8□□□□□ -1.8
HTT-202ENST00000502820 H3BUA1 57 aa3.8□□□□□ -1.8
HTT-202ENST00000502820 MRPS12O15235 138 aaKnown RBP3.8□□□□□ -1.8
HTT-202ENST00000502820 SYNJ2BPP57105 145 aa3.8□□□□□ -1.8
HTT-202ENST00000502820 SLC25A29Q8N8R3 303 aa3.8□□□□□ -1.8
HTT-202ENST00000502820 NEXN-AS1Q8NBZ9 246 aa3.8□□□□□ -1.8
HTT-202ENST00000502820 COPS9Q8WXC6 57 aa3.8□□□□□ -1.8
HTT-202ENST00000502820 SGK494Q96LW2 274 aa3.8□□□□□ -1.8
HTT-202ENST00000502820 CARD19Q96LW7 228 aa3.8□□□□□ -1.8
HTT-202ENST00000502820 TIMM17AQ99595 171 aa3.8□□□□□ -1.8
HTT-202ENST00000502820 OVOL2Q9BRP0 275 aa3.8□□□□□ -1.8
HTT-202ENST00000502820 HECTD4Q9Y4D8 3996 aa3.8□□□□□ -1.8
HTT-202ENST00000502820 DNAH10Q8IVF4 4471 aa3.8□□□□□ -1.8
HTT-202ENST00000502820 TRAV8-1A0A0A6YYK1 113 aa3.79□□□□□ -1.8
HTT-202ENST00000502820 TRAV2A0A0B4J234 112 aa3.79□□□□□ -1.8
HTT-202ENST00000502820 I3L2K1 104 aa3.79□□□□□ -1.8
HTT-202ENST00000502820 LGALS9O00182 355 aa3.79□□□□□ -1.8
HTT-202ENST00000502820 TCL1BO95988 128 aa3.79□□□□□ -1.8
HTT-202ENST00000502820 RBMY1CP0DJD4 496 aa3.79□□□□□ -1.8
HTT-202ENST00000502820 CRIP1P50238 77 aa3.79□□□□□ -1.8
HTT-202ENST00000502820 NANOS2P60321 138 aaKnown RBP3.79□□□□□ -1.8
HTT-202ENST00000502820 PMVKQ15126 192 aa3.79□□□□□ -1.8
HTT-202ENST00000502820 DEFB135Q30KP9 77 aa3.79□□□□□ -1.8
HTT-202ENST00000502820 MEIG1Q5JSS6 88 aa3.79□□□□□ -1.8
HTT-202ENST00000502820 DYNLRB2Q8TF09 96 aa3.79□□□□□ -1.8
HTT-202ENST00000502820 RASL10AQ92737 203 aa3.79□□□□□ -1.8
HTT-202ENST00000502820 SCGB3A1Q96QR1 104 aa3.79□□□□□ -1.8
HTT-202ENST00000502820 PRADC1Q9BSG0 188 aa3.79□□□□□ -1.8
HTT-202ENST00000502820 PPDPFQ9H3Y8 114 aa3.79□□□□□ -1.8
HTT-202ENST00000502820 KMT2AQ03164 3969 aa3.78□□□□□ -1.8
HTT-202ENST00000502820 A0A0J9YY99 117 aa3.78□□□□□ -1.8
HTT-202ENST00000502820 ATOX1O00244 68 aa3.78□□□□□ -1.8
HTT-202ENST00000502820 SPRY2O43597 315 aa3.78□□□□□ -1.8
HTT-202ENST00000502820 IGKV1-17P01599 117 aa3.78□□□□□ -1.8
HTT-202ENST00000502820 IGHV3-30P01768 117 aa3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms