RNA–Protein interactions for RNA: ENST00000502563.5

UBE2D3-212, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 3

Gene UBE2D3, Length 680 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-212ENST00000502563 AMN1Q8IY45 258 aa7.23□□□□□ -1.25
UBE2D3-212ENST00000502563 BTF3L4Q96K17 158 aa7.23□□□□□ -1.25
UBE2D3-212ENST00000502563 COX11Q9Y6N1 276 aa7.23□□□□□ -1.25
UBE2D3-212ENST00000502563 URGCP-MRPS24S4R325 110 aa7.23□□□□□ -1.25
UBE2D3-212ENST00000502563 A0A087WX48 190 aa7.22□□□□□ -1.25
UBE2D3-212ENST00000502563 SDHAF1A6NFY7 115 aa7.22□□□□□ -1.25
UBE2D3-212ENST00000502563 POLR2KP53803 58 aaKnown RBP7.22□□□□□ -1.25
UBE2D3-212ENST00000502563 COTL1Q14019 142 aa7.22□□□□□ -1.25
UBE2D3-212ENST00000502563 C20orf78Q9BR46 151 aa7.22□□□□□ -1.25
UBE2D3-212ENST00000502563 DNAH17Q9UFH2 4485 aa7.21□□□□□ -1.26
UBE2D3-212ENST00000502563 TRAV26-2A0A0B4J265 109 aa7.21□□□□□ -1.26
UBE2D3-212ENST00000502563 I3L3M4 83 aa7.21□□□□□ -1.26
UBE2D3-212ENST00000502563 TCAPO15273 167 aa7.21□□□□□ -1.26
UBE2D3-212ENST00000502563 Q0VG73 95 aa7.21□□□□□ -1.26
UBE2D3-212ENST00000502563 NRACQ8N912 160 aa7.21□□□□□ -1.26
UBE2D3-212ENST00000502563 TMEM70Q9BUB7 260 aa7.21□□□□□ -1.26
UBE2D3-212ENST00000502563 ST20Q9HBF5 79 aa7.21□□□□□ -1.26
UBE2D3-212ENST00000502563 LAMTOR2Q9Y2Q5 125 aa7.21□□□□□ -1.26
UBE2D3-212ENST00000502563 HECTD4Q9Y4D8 3996 aa7.21□□□□□ -1.26
UBE2D3-212ENST00000502563 COX19Q49B96 90 aa7.2□□□□□ -1.26
UBE2D3-212ENST00000502563 MRPL51Q4U2R6 128 aaKnown RBP7.2□□□□□ -1.26
UBE2D3-212ENST00000502563 RPL39LQ96EH5 51 aaKnown RBP7.2□□□□□ -1.26
UBE2D3-212ENST00000502563 TMEM243Q9BU79 118 aa7.2□□□□□ -1.26
UBE2D3-212ENST00000502563 TM2D2Q9BX73 214 aa7.2□□□□□ -1.26
UBE2D3-212ENST00000502563 PRR34Q9NV39 138 aa7.2□□□□□ -1.26
UBE2D3-212ENST00000502563 PRSS47A8MTI9 375 aa7.19□□□□□ -1.26
UBE2D3-212ENST00000502563 VCYO14598 125 aa7.19□□□□□ -1.26
UBE2D3-212ENST00000502563 ZNF25P17030 456 aaPredicted RBP7.19□□□□□ -1.26
UBE2D3-212ENST00000502563 CAMPP49913 170 aa7.19□□□□□ -1.26
UBE2D3-212ENST00000502563 SUMO2P61956 95 aaKnown RBP7.19□□□□□ -1.26
UBE2D3-212ENST00000502563 TNP2Q05952 138 aa7.19□□□□□ -1.26
UBE2D3-212ENST00000502563 NDUFA5Q16718 116 aa7.19□□□□□ -1.26
UBE2D3-212ENST00000502563 MRPL54Q6P161 138 aaKnown RBP7.19□□□□□ -1.26
UBE2D3-212ENST00000502563 SVBPQ8N300 66 aa7.19□□□□□ -1.26
UBE2D3-212ENST00000502563 CLRN3Q8NCR9 226 aa7.19□□□□□ -1.26
UBE2D3-212ENST00000502563 RMI2Q96E14 147 aa7.19□□□□□ -1.26
UBE2D3-212ENST00000502563 CHCHD5Q9BSY4 110 aa7.19□□□□□ -1.26
UBE2D3-212ENST00000502563 IGHV3-30P01768 117 aa7.18□□□□□ -1.26
UBE2D3-212ENST00000502563 IGHV3-33P01772 117 aa7.18□□□□□ -1.26
UBE2D3-212ENST00000502563 IGHV3-30-3P0DP02 117 aa7.18□□□□□ -1.26
UBE2D3-212ENST00000502563 IGHV3-30-5P0DP03 117 aa7.18□□□□□ -1.26
UBE2D3-212ENST00000502563 ESDP10768 282 aa7.18□□□□□ -1.26
UBE2D3-212ENST00000502563 RPS10P46783 165 aaKnown RBP7.18□□□□□ -1.26
UBE2D3-212ENST00000502563 AMTP48728 403 aa7.18□□□□□ -1.26
UBE2D3-212ENST00000502563 MIAQ16674 131 aa7.18□□□□□ -1.26
UBE2D3-212ENST00000502563 MPV17L2Q567V2 206 aa7.18□□□□□ -1.26
UBE2D3-212ENST00000502563 ORMDL3Q8N138 153 aa7.18□□□□□ -1.26
UBE2D3-212ENST00000502563 EPPK1P58107 5090 aaKnown RBP7.17□□□□□ -1.26
UBE2D3-212ENST00000502563 C7orf77A4D0Y5 90 aa7.17□□□□□ -1.26
UBE2D3-212ENST00000502563 GAS8-AS1O95177 125 aa7.17□□□□□ -1.26
UBE2D3-212ENST00000502563 SNAPINO95295 136 aa7.17□□□□□ -1.26
UBE2D3-212ENST00000502563 APCSP02743 223 aa7.17□□□□□ -1.26
UBE2D3-212ENST00000502563 S100PP25815 95 aa7.17□□□□□ -1.26
UBE2D3-212ENST00000502563 CKS2P33552 79 aa7.17□□□□□ -1.26
UBE2D3-212ENST00000502563 RBX1P62877 108 aa7.17□□□□□ -1.26
UBE2D3-212ENST00000502563 CDPF1Q6NVV7 123 aa7.17□□□□□ -1.26
UBE2D3-212ENST00000502563 MRPL52Q86TS9 123 aaKnown RBP7.17□□□□□ -1.26
UBE2D3-212ENST00000502563 KIR2DL4Q99706 377 aa7.17□□□□□ -1.26
UBE2D3-212ENST00000502563 CSDC2Q9Y534 153 aaKnown RBP7.17□□□□□ -1.26
UBE2D3-212ENST00000502563 TRAV8-4A0A0B4J246 113 aa7.16□□□□□ -1.26
UBE2D3-212ENST00000502563 TMEM262E9PQX1 116 aa7.16□□□□□ -1.26
UBE2D3-212ENST00000502563 K7EMI3 77 aa7.16□□□□□ -1.26
UBE2D3-212ENST00000502563 EREGO14944 169 aa7.16□□□□□ -1.26
UBE2D3-212ENST00000502563 TNFRSF6BO95407 300 aa7.16□□□□□ -1.26
UBE2D3-212ENST00000502563 TSHBP01222 138 aa7.16□□□□□ -1.26
UBE2D3-212ENST00000502563 HLA-DQA1P01909 254 aa7.16□□□□□ -1.26
UBE2D3-212ENST00000502563 PMCHP20382 165 aa7.16□□□□□ -1.26
UBE2D3-212ENST00000502563 SMAGPQ0VAQ4 97 aa7.16□□□□□ -1.26
UBE2D3-212ENST00000502563 KRTAP9-9Q9BYP9 154 aa7.16□□□□□ -1.26
UBE2D3-212ENST00000502563 KRTAP9-4Q9BYQ2 154 aa7.16□□□□□ -1.26
UBE2D3-212ENST00000502563 KLK12Q9UKR0 248 aa7.16□□□□□ -1.26
UBE2D3-212ENST00000502563 A0A087WTM6 91 aa7.15□□□□□ -1.26
UBE2D3-212ENST00000502563 LRCOL1A6NCL2 159 aa7.15□□□□□ -1.26
UBE2D3-212ENST00000502563 D6R8Y8 96 aa7.15□□□□□ -1.26
UBE2D3-212ENST00000502563 UBE2L6O14933 153 aa7.15□□□□□ -1.26
UBE2D3-212ENST00000502563 CRPP02741 224 aa7.15□□□□□ -1.26
UBE2D3-212ENST00000502563 MT-ND6P03923 174 aa7.15□□□□□ -1.26
UBE2D3-212ENST00000502563 ENHOQ6UWT2 76 aa7.15□□□□□ -1.26
UBE2D3-212ENST00000502563 TMEM136Q6ZRR5 245 aa7.15□□□□□ -1.26
UBE2D3-212ENST00000502563 C20orf203Q8NBC4 194 aa7.15□□□□□ -1.26
UBE2D3-212ENST00000502563 SMIM2Q9BVW6 85 aa7.15□□□□□ -1.26
UBE2D3-212ENST00000502563 GNB1LQ9BYB4 327 aa7.15□□□□□ -1.26
UBE2D3-212ENST00000502563 PKD1P98161 4303 aa7.15□□□□□ -1.27
UBE2D3-212ENST00000502563 ANGP03950 147 aaKnown RBP7.14□□□□□ -1.27
UBE2D3-212ENST00000502563 GAGE6Q13070 117 aa7.14□□□□□ -1.27
UBE2D3-212ENST00000502563 Q8N976 141 aa7.14□□□□□ -1.27
UBE2D3-212ENST00000502563 NTN5Q8WTR8 489 aaPredicted RBP7.14□□□□□ -1.27
UBE2D3-212ENST00000502563 TIMM21Q9BVV7 248 aa7.14□□□□□ -1.27
UBE2D3-212ENST00000502563 PKHD1P08F94 4074 aa7.13□□□□□ -1.27
UBE2D3-212ENST00000502563 SMKR1H3BMG3 65 aa7.13□□□□□ -1.27
UBE2D3-212ENST00000502563 PSCAO43653 123 aa7.13□□□□□ -1.27
UBE2D3-212ENST00000502563 APOC3P02656 99 aa7.13□□□□□ -1.27
UBE2D3-212ENST00000502563 REG3AQ06141 175 aa7.13□□□□□ -1.27
UBE2D3-212ENST00000502563 UBE2WQ96B02 151 aa7.13□□□□□ -1.27
UBE2D3-212ENST00000502563 TMEM18Q96B42 140 aa7.13□□□□□ -1.27
UBE2D3-212ENST00000502563 PRELID3AQ96N28 172 aa7.13□□□□□ -1.27
UBE2D3-212ENST00000502563 C1orf43Q9BWL3 253 aa7.13□□□□□ -1.27
UBE2D3-212ENST00000502563 RPS10P5Q9NQ39 176 aa7.13□□□□□ -1.27
UBE2D3-212ENST00000502563 IGLV4-60A0A075B6I1 120 aa7.12□□□□□ -1.27
UBE2D3-212ENST00000502563 CCL25O15444 150 aa7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms