RNA–Protein interactions for RNA: ENST00000502453.1

SUB1-202, Transcript of SUB1 homolog, transcriptional regulator, humanhuman

TSL 1 (best)

Gene SUB1, Length 4,273 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUB1-202ENST00000502453 RNF5Q99942 180 aa2.46□□□□□ -2.02
SUB1-202ENST00000502453 KIAA1549LQ6ZVL6 1849 aa2.46□□□□□ -2.02
SUB1-202ENST00000502453 PTPRSQ13332 1948 aa2.46□□□□□ -2.02
SUB1-202ENST00000502453 H3BPC8 53 aa2.45□□□□□ -2.02
SUB1-202ENST00000502453 KLKP1Q107X0 134 aa2.45□□□□□ -2.02
SUB1-202ENST00000502453 C9orf106Q8NAJ2 232 aa2.45□□□□□ -2.02
SUB1-202ENST00000502453 NACAE9PAV3 2078 aa2.45□□□□□ -2.02
SUB1-202ENST00000502453 NINQ8N4C6 2090 aa2.45□□□□□ -2.02
SUB1-202ENST00000502453 FREM2Q5SZK8 3169 aa2.45□□□□□ -2.02
SUB1-202ENST00000502453 TRAV13-2A0A0B4J235 113 aa2.45□□□□□ -2.02
SUB1-202ENST00000502453 MRPS21P82921 87 aaKnown RBP2.45□□□□□ -2.02
SUB1-202ENST00000502453 ZCCHC23Q6ZST2 131 aa2.45□□□□□ -2.02
SUB1-202ENST00000502453 LINC00643Q86TS7 51 aa2.45□□□□□ -2.02
SUB1-202ENST00000502453 FAM19A2Q8N3H0 131 aa2.45□□□□□ -2.02
SUB1-202ENST00000502453 Q8NDZ9 215 aa2.45□□□□□ -2.02
SUB1-202ENST00000502453 FRYQ5TBA9 3013 aa2.45□□□□□ -2.02
SUB1-202ENST00000502453 NBPF19A0A087WUL8 3843 aa2.45□□□□□ -2.02
SUB1-202ENST00000502453 C5orf67F2Z3F1 127 aa2.45□□□□□ -2.02
SUB1-202ENST00000502453 NCBP2-AS2Q69YL0 99 aa2.45□□□□□ -2.02
SUB1-202ENST00000502453 Q8N814 137 aa2.45□□□□□ -2.02
SUB1-202ENST00000502453 SPTSSBQ8NFR3 76 aa2.45□□□□□ -2.02
SUB1-202ENST00000502453 hDV103S1A0JD37 113 aa2.45□□□□□ -2.02
SUB1-202ENST00000502453 C10orf142B7Z368 130 aa2.45□□□□□ -2.02
SUB1-202ENST00000502453 IL4P05112 153 aa2.45□□□□□ -2.02
SUB1-202ENST00000502453 DNAH10OSP0CZ25 163 aa2.45□□□□□ -2.02
SUB1-202ENST00000502453 FXYD2P54710 66 aa2.45□□□□□ -2.02
SUB1-202ENST00000502453 ZNF56Q15929 161 aa2.45□□□□□ -2.02
SUB1-202ENST00000502453 TMEM170BQ5T4T1 132 aa2.45□□□□□ -2.02
SUB1-202ENST00000502453 Q6ZQT0 140 aa2.45□□□□□ -2.02
SUB1-202ENST00000502453 LINC00269Q8N2A0 174 aa2.45□□□□□ -2.02
SUB1-202ENST00000502453 FXYD1O00168 92 aa2.44□□□□□ -2.02
SUB1-202ENST00000502453 SLPIP03973 132 aa2.44□□□□□ -2.02
SUB1-202ENST00000502453 IGLV7-43P04211 117 aa2.44□□□□□ -2.02
SUB1-202ENST00000502453 C14orf177Q52M58 125 aa2.44□□□□□ -2.02
SUB1-202ENST00000502453 CELSR3Q9NYQ7 3312 aa2.44□□□□□ -2.02
SUB1-202ENST00000502453 LAMA4Q16363 1823 aa2.44□□□□□ -2.02
SUB1-202ENST00000502453 TRBV10-2A0A0K0K1G8 114 aa2.44□□□□□ -2.02
SUB1-202ENST00000502453 ACYP1P07311 99 aa2.44□□□□□ -2.02
SUB1-202ENST00000502453 KRTAP19-4Q3LI73 84 aa2.44□□□□□ -2.02
SUB1-202ENST00000502453 MUC7Q8TAX7 377 aa2.44□□□□□ -2.02
SUB1-202ENST00000502453 FAM103A1Q9BTL3 118 aaKnown RBP2.44□□□□□ -2.02
SUB1-202ENST00000502453 ATRXP46100 2492 aa2.44□□□□□ -2.02
SUB1-202ENST00000502453 TRBV7-1A0A0A6YYK4 115 aa2.44□□□□□ -2.02
SUB1-202ENST00000502453 TRAV1-2A0A0B4J238 106 aa2.44□□□□□ -2.02
SUB1-202ENST00000502453 A6NIN4 97 aa2.44□□□□□ -2.02
SUB1-202ENST00000502453 TXNDC17Q9BRA2 123 aa2.44□□□□□ -2.02
SUB1-202ENST00000502453 COL4A4P53420 1690 aaPredicted RBP2.44□□□□□ -2.02
SUB1-202ENST00000502453 A0A0G2JMZ2 1700 aa2.44□□□□□ -2.02
SUB1-202ENST00000502453 CACNA1AO00555 2505 aa2.44□□□□□ -2.02
SUB1-202ENST00000502453 IGHV3-53P01767 116 aa2.43□□□□□ -2.02
SUB1-202ENST00000502453 SMIM4Q8WVI0 70 aa2.43□□□□□ -2.02
SUB1-202ENST00000502453 NHP2Q9NX24 153 aaKnown RBP2.43□□□□□ -2.02
SUB1-202ENST00000502453 NDUFA12Q9UI09 145 aa2.43□□□□□ -2.02
SUB1-202ENST00000502453 DOCK11Q5JSL3 2073 aa2.43□□□□□ -2.02
SUB1-202ENST00000502453 NNATQ16517 81 aa2.43□□□□□ -2.02
SUB1-202ENST00000502453 CYP2G1PQ6ZSU1 146 aa2.43□□□□□ -2.02
SUB1-202ENST00000502453 LRRC37A2A6NM11 1700 aa2.43□□□□□ -2.02
SUB1-202ENST00000502453 CRYM-AS1A6NIL9 109 aa2.42□□□□□ -2.02
SUB1-202ENST00000502453 ZNF861PO60384 105 aa2.42□□□□□ -2.02
SUB1-202ENST00000502453 IGLV1-47P01700 117 aa2.42□□□□□ -2.02
SUB1-202ENST00000502453 GCHFRP30047 84 aa2.42□□□□□ -2.02
SUB1-202ENST00000502453 VMO1Q7Z5L0 202 aa2.42□□□□□ -2.02
SUB1-202ENST00000502453 BAGE3Q86Y29 109 aa2.42□□□□□ -2.02
SUB1-202ENST00000502453 BAGE2Q86Y30 109 aa2.42□□□□□ -2.02
SUB1-202ENST00000502453 SMAD5-AS1Q9Y6J3 95 aa2.42□□□□□ -2.02
SUB1-202ENST00000502453 CSMD1Q96PZ7 3565 aa2.42□□□□□ -2.02
SUB1-202ENST00000502453 E7EUB6 86 aa2.42□□□□□ -2.02
SUB1-202ENST00000502453 CD24P25063 80 aa2.42□□□□□ -2.02
SUB1-202ENST00000502453 ROMO1P60602 79 aa2.42□□□□□ -2.02
SUB1-202ENST00000502453 PPP1R1CQ8WVI7 109 aa2.42□□□□□ -2.02
SUB1-202ENST00000502453 SDK2Q58EX2 2172 aa2.42□□□□□ -2.02
SUB1-202ENST00000502453 ZNF791Q3KP31 576 aaPredicted RBP2.42□□□□□ -2.02
SUB1-202ENST00000502453 CASC2Q6XLA1 102 aa2.42□□□□□ -2.02
SUB1-202ENST00000502453 NMES1Q9C002 83 aa2.42□□□□□ -2.02
SUB1-202ENST00000502453 PKD1L2Q7Z442 2459 aa2.42□□□□□ -2.02
SUB1-202ENST00000502453 FAM223BA6NKX1 122 aa2.42□□□□□ -2.02
SUB1-202ENST00000502453 NDUFC1O43677 76 aa2.42□□□□□ -2.02
SUB1-202ENST00000502453 Q96M85 177 aa2.42□□□□□ -2.02
SUB1-202ENST00000502453 ARL2-SNX15V9GYD0 113 aa2.42□□□□□ -2.02
SUB1-202ENST00000502453 CLECL1Q8IZS7 167 aa2.41□□□□□ -2.02
SUB1-202ENST00000502453 LINC00467Q9BRT7 94 aa2.41□□□□□ -2.02
SUB1-202ENST00000502453 VPS13CQ709C8 3753 aa2.41□□□□□ -2.02
SUB1-202ENST00000502453 IGHV1-18A0A0C4DH31 117 aa2.41□□□□□ -2.02
SUB1-202ENST00000502453 BCE1O60756 84 aa2.41□□□□□ -2.02
SUB1-202ENST00000502453 KMT2BQ9UMN6 2715 aaPredicted RBP2.41□□□□□ -2.02
SUB1-202ENST00000502453 IQCF6A8MYZ5 107 aa2.41□□□□□ -2.02
SUB1-202ENST00000502453 LCE3BQ5TA77 95 aa2.41□□□□□ -2.02
SUB1-202ENST00000502453 CLPSP04118 112 aa2.4□□□□□ -2.02
SUB1-202ENST00000502453 Q5VV11 94 aa2.4□□□□□ -2.02
SUB1-202ENST00000502453 LYPD6Q86Y78 171 aa2.4□□□□□ -2.02
SUB1-202ENST00000502453 DYNLRB2Q8TF09 96 aa2.4□□□□□ -2.02
SUB1-202ENST00000502453 SLC48A1Q6P1K1 146 aa2.4□□□□□ -2.03
SUB1-202ENST00000502453 RPRMLQ8N4K4 120 aa2.4□□□□□ -2.03
SUB1-202ENST00000502453 TMEM141Q96I45 108 aa2.4□□□□□ -2.03
SUB1-202ENST00000502453 SCN3AQ9NY46 2000 aa2.4□□□□□ -2.03
SUB1-202ENST00000502453 COL11A1P12107 1806 aaPredicted RBP2.4□□□□□ -2.03
SUB1-202ENST00000502453 A0A087WYN8 130 aa2.4□□□□□ -2.03
SUB1-202ENST00000502453 GDF5OSQ5U4N7 250 aa2.4□□□□□ -2.03
SUB1-202ENST00000502453 KRTAP9-3Q9BYQ3 159 aa2.4□□□□□ -2.03
SUB1-202ENST00000502453 P0C880 135 aa2.39□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 96.3 ms