RNA–Protein interactions for RNA: ENST00000502342.1

SMAD1-203, Transcript of SMAD family member 1, humanhuman

TSL 3

Gene SMAD1, Length 262 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-203ENST00000502342 DAPK1P53355 1430 aa-0.94□□□□□ -2.56
SMAD1-203ENST00000502342 H0YJX3 145 aa-0.94□□□□□ -2.56
SMAD1-203ENST00000502342 PIPP12273 146 aaPredicted RBP-0.94□□□□□ -2.56
SMAD1-203ENST00000502342 SPAG11AQ6PDA7 123 aa-0.94□□□□□ -2.56
SMAD1-203ENST00000502342 MMGT1Q8N4V1 131 aa-0.94□□□□□ -2.56
SMAD1-203ENST00000502342 SPANXCQ9NY87 97 aa-0.94□□□□□ -2.56
SMAD1-203ENST00000502342 TRBV6-1A0A0K0K1D8 114 aa-0.95□□□□□ -2.56
SMAD1-203ENST00000502342 IL5P05113 134 aa-0.95□□□□□ -2.56
SMAD1-203ENST00000502342 KRTAP19-8Q3LI54 63 aa-0.95□□□□□ -2.56
SMAD1-203ENST00000502342 KRTAP20-2Q3LI61 65 aa-0.95□□□□□ -2.56
SMAD1-203ENST00000502342 ZNF818PQ6ZRF7 136 aa-0.95□□□□□ -2.56
SMAD1-203ENST00000502342 PSMG3Q9BT73 122 aaPredicted RBP-0.95□□□□□ -2.56
SMAD1-203ENST00000502342 PKHD1P08F94 4074 aa-0.95□□□□□ -2.56
SMAD1-203ENST00000502342 URB1O60287 2271 aaKnown RBP-0.95□□□□□ -2.56
SMAD1-203ENST00000502342 USH2AO75445 5202 aa-0.95□□□□□ -2.56
SMAD1-203ENST00000502342 TSC2P49815 1807 aa-0.96□□□□□ -2.56
SMAD1-203ENST00000502342 LAMC1P11047 1609 aa-0.96□□□□□ -2.56
SMAD1-203ENST00000502342 DBIP07108 87 aaKnown RBP-0.96□□□□□ -2.56
SMAD1-203ENST00000502342 PIGYQ3MUY2 71 aa-0.96□□□□□ -2.56
SMAD1-203ENST00000502342 SMIM4Q8WVI0 70 aa-0.96□□□□□ -2.56
SMAD1-203ENST00000502342 LINC00312Q9Y6C7 94 aa-0.96□□□□□ -2.56
SMAD1-203ENST00000502342 ARHGEF10O15013 1369 aa-0.96□□□□□ -2.56
SMAD1-203ENST00000502342 FAT1Q14517 4588 aa-0.97□□□□□ -2.56
SMAD1-203ENST00000502342 FAM236AA0A1B0GUQ0 79 aa-0.97□□□□□ -2.56
SMAD1-203ENST00000502342 FAM236BA0A1B0GV22 79 aa-0.97□□□□□ -2.56
SMAD1-203ENST00000502342 I3L2K1 104 aa-0.97□□□□□ -2.56
SMAD1-203ENST00000502342 CCL18P55774 89 aa-0.97□□□□□ -2.56
SMAD1-203ENST00000502342 S100A7L2Q5SY68 101 aa-0.97□□□□□ -2.56
SMAD1-203ENST00000502342 R4GMQ9 66 aa-0.97□□□□□ -2.56
SMAD1-203ENST00000502342 PRKDCP78527 4128 aaKnown RBP-0.97□□□□□ -2.56
SMAD1-203ENST00000502342 MYH8P13535 1937 aa-0.97□□□□□ -2.57
SMAD1-203ENST00000502342 CTXND1A0A1B0GTU2 59 aa-0.98□□□□□ -2.57
SMAD1-203ENST00000502342 SNCGO76070 127 aa-0.98□□□□□ -2.57
SMAD1-203ENST00000502342 PPP1R17O96001 155 aa-0.98□□□□□ -2.57
SMAD1-203ENST00000502342 CBLN1P23435 193 aa-0.98□□□□□ -2.57
SMAD1-203ENST00000502342 MT4P47944 62 aa-0.98□□□□□ -2.57
SMAD1-203ENST00000502342 AGPAT4-IT1Q9H0P7 198 aa-0.98□□□□□ -2.57
SMAD1-203ENST00000502342 PRDM2Q13029 1718 aa-0.98□□□□□ -2.57
SMAD1-203ENST00000502342 NWD2Q9ULI1 1742 aa-0.98□□□□□ -2.57
SMAD1-203ENST00000502342 CASKIN1Q8WXD9 1431 aa-0.98□□□□□ -2.57
SMAD1-203ENST00000502342 WDR7Q9Y4E6 1490 aa-0.99□□□□□ -2.57
SMAD1-203ENST00000502342 PAPPAQ13219 1627 aa-0.99□□□□□ -2.57
SMAD1-203ENST00000502342 RYR1P21817 5038 aa-0.99□□□□□ -2.57
SMAD1-203ENST00000502342 COX6B1P14854 86 aa-0.99□□□□□ -2.57
SMAD1-203ENST00000502342 HIST1H1AQ02539 215 aaPredicted RBP-0.99□□□□□ -2.57
SMAD1-203ENST00000502342 MORN2Q502X0 79 aa-0.99□□□□□ -2.57
SMAD1-203ENST00000502342 Q6ZUT4 128 aa-0.99□□□□□ -2.57
SMAD1-203ENST00000502342 SPTSSAQ969W0 71 aa-0.99□□□□□ -2.57
SMAD1-203ENST00000502342 FXYD6Q9H0Q3 95 aa-0.99□□□□□ -2.57
SMAD1-203ENST00000502342 MRPL40Q9NQ50 206 aaKnown RBP-0.99□□□□□ -2.57
SMAD1-203ENST00000502342 SPANXA1Q9NS26 97 aa-0.99□□□□□ -2.57
SMAD1-203ENST00000502342 LRRC37A2A6NM11 1700 aa-0.99□□□□□ -2.57
SMAD1-203ENST00000502342 FLGP20930 4061 aaPredicted RBP-0.99□□□□□ -2.57
SMAD1-203ENST00000502342 TMEM2Q9UHN6 1383 aa-0.99□□□□□ -2.57
SMAD1-203ENST00000502342 LAMA5O15230 3695 aa-1□□□□□ -2.57
SMAD1-203ENST00000502342 CDK5RAP2Q96SN8 1893 aa-1□□□□□ -2.57
SMAD1-203ENST00000502342 SPRR1BP22528 89 aa-1□□□□□ -2.57
SMAD1-203ENST00000502342 SELENOSQ9BQE4 189 aa-1□□□□□ -2.57
SMAD1-203ENST00000502342 OVOS2A0A0J9YW53 1432 aa-1□□□□□ -2.57
SMAD1-203ENST00000502342 OVOS2Q6IE36 1432 aa-1□□□□□ -2.57
SMAD1-203ENST00000502342 MRC1P22897 1456 aa-1□□□□□ -2.57
SMAD1-203ENST00000502342 M0R135 149 aa-1.01□□□□□ -2.57
SMAD1-203ENST00000502342 IGLC6P0CF74 106 aa-1.01□□□□□ -2.57
SMAD1-203ENST00000502342 SEC11CQ9BY50 192 aa-1.01□□□□□ -2.57
SMAD1-203ENST00000502342 PXDNQ92626 1479 aa-1.01□□□□□ -2.57
SMAD1-203ENST00000502342 ADGRB1O14514 1584 aa-1.01□□□□□ -2.57
SMAD1-203ENST00000502342 DOPEY1Q5JWR5 2465 aa-1.01□□□□□ -2.57
SMAD1-203ENST00000502342 TGP01266 2768 aa-1.02□□□□□ -2.57
SMAD1-203ENST00000502342 GNG14A0A1W2PPG7 69 aa-1.02□□□□□ -2.57
SMAD1-203ENST00000502342 NDUFB6O95139 128 aa-1.02□□□□□ -2.57
SMAD1-203ENST00000502342 RRAS2P62070 204 aaPredicted RBP-1.02□□□□□ -2.57
SMAD1-203ENST00000502342 CCL8P80075 99 aa-1.02□□□□□ -2.57
SMAD1-203ENST00000502342 HYDINQ4G0P3 5121 aa-1.02□□□□□ -2.57
SMAD1-203ENST00000502342 MYH6P13533 1939 aa-1.03□□□□□ -2.57
SMAD1-203ENST00000502342 DISP2A7MBM2 1401 aa-1.03□□□□□ -2.57
SMAD1-203ENST00000502342 SETD2Q9BYW2 2564 aaPredicted RBP-1.03□□□□□ -2.57
SMAD1-203ENST00000502342 J3QR89 54 aa-1.03□□□□□ -2.57
SMAD1-203ENST00000502342 M0R2T5 61 aa-1.03□□□□□ -2.57
SMAD1-203ENST00000502342 NBEAP1P0C6P0 100 aa-1.03□□□□□ -2.57
SMAD1-203ENST00000502342 NEFHP12036 1026 aa-1.03□□□□□ -2.57
SMAD1-203ENST00000502342 COX17Q14061 63 aa-1.03□□□□□ -2.57
SMAD1-203ENST00000502342 TMEM170BQ5T4T1 132 aa-1.03□□□□□ -2.57
SMAD1-203ENST00000502342 SDF2Q99470 211 aa-1.03□□□□□ -2.57
SMAD1-203ENST00000502342 UBR4Q5T4S7 5183 aa-1.03□□□□□ -2.57
SMAD1-203ENST00000502342 DNAJC13O75165 2243 aa-1.04□□□□□ -2.58
SMAD1-203ENST00000502342 SPINK4O60575 86 aa-1.04□□□□□ -2.58
SMAD1-203ENST00000502342 PITX3O75364 302 aa-1.04□□□□□ -2.58
SMAD1-203ENST00000502342 TNFP01375 233 aa-1.04□□□□□ -2.58
SMAD1-203ENST00000502342 Q6JHZ5 121 aa-1.04□□□□□ -2.58
SMAD1-203ENST00000502342 AQP10Q96PS8 301 aa-1.04□□□□□ -2.58
SMAD1-203ENST00000502342 AIF1LQ9BQI0 150 aa-1.04□□□□□ -2.58
SMAD1-203ENST00000502342 SMIM3Q9BZL3 60 aa-1.04□□□□□ -2.58
SMAD1-203ENST00000502342 V9GYH0 126 aa-1.04□□□□□ -2.58
SMAD1-203ENST00000502342 ZNF236Q9UL36 1845 aa-1.04□□□□□ -2.58
SMAD1-203ENST00000502342 GOLGA4Q13439 2230 aaKnown RBP-1.05□□□□□ -2.58
SMAD1-203ENST00000502342 SIX6O95475 246 aa-1.06□□□□□ -2.58
SMAD1-203ENST00000502342 LINC00694P0DN24 101 aa-1.06□□□□□ -2.58
SMAD1-203ENST00000502342 C10orf128Q5T292 105 aa-1.06□□□□□ -2.58
SMAD1-203ENST00000502342 SCIMPQ6UWF3 145 aa-1.06□□□□□ -2.58
SMAD1-203ENST00000502342 LENEPQ9Y5L5 61 aa-1.06□□□□□ -2.58
Retrieved 100 of 20,778 RNA–protein pairs in 87.5 ms