RNA–Protein interactions for RNA: ENST00000502315.1

SH3RF1-202, Transcript of SH3 domain containing ring finger 1, humanhuman

TSL 4

Gene SH3RF1, Length 487 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-202ENST00000502315 RAB14P61106 215 aa4.58□□□□□ -1.68
SH3RF1-202ENST00000502315 REG3AQ06141 175 aa4.58□□□□□ -1.68
SH3RF1-202ENST00000502315 NDUFA5Q16718 116 aa4.58□□□□□ -1.68
SH3RF1-202ENST00000502315 NTM-AS1Q6ZSK4 140 aa4.58□□□□□ -1.68
SH3RF1-202ENST00000502315 COMMD7Q86VX2 200 aa4.58□□□□□ -1.68
SH3RF1-202ENST00000502315 LINC00269Q8N2A0 174 aa4.58□□□□□ -1.68
SH3RF1-202ENST00000502315 LINC00474Q9P2X8 69 aa4.58□□□□□ -1.68
SH3RF1-202ENST00000502315 LINC00862A6NCI5 91 aa4.57□□□□□ -1.68
SH3RF1-202ENST00000502315 PAGE4O60829 102 aa4.57□□□□□ -1.68
SH3RF1-202ENST00000502315 HLA-DQA1P01909 254 aa4.57□□□□□ -1.68
SH3RF1-202ENST00000502315 TRGC1P0CF51 173 aa4.57□□□□□ -1.68
SH3RF1-202ENST00000502315 SULT1A2P50226 295 aa4.57□□□□□ -1.68
SH3RF1-202ENST00000502315 LCE4AQ5TA78 99 aa4.57□□□□□ -1.68
SH3RF1-202ENST00000502315 OR10AG1Q8NH19 301 aa4.57□□□□□ -1.68
SH3RF1-202ENST00000502315 C7orf33Q8WU49 177 aa4.57□□□□□ -1.68
SH3RF1-202ENST00000502315 SFT2D1Q8WV19 159 aa4.57□□□□□ -1.68
SH3RF1-202ENST00000502315 TMEM243Q9BU79 118 aa4.57□□□□□ -1.68
SH3RF1-202ENST00000502315 MANBALQ9NQG1 85 aa4.57□□□□□ -1.68
SH3RF1-202ENST00000502315 NIT2Q9NQR4 276 aa4.57□□□□□ -1.68
SH3RF1-202ENST00000502315 PLAC8Q9NZF1 115 aa4.57□□□□□ -1.68
SH3RF1-202ENST00000502315 HMCN2Q8NDA2 5059 aa4.57□□□□□ -1.68
SH3RF1-202ENST00000502315 IGLV10-54A0A075B6I4 117 aa4.56□□□□□ -1.68
SH3RF1-202ENST00000502315 TMSB15BA0A087X1C1 80 aa4.56□□□□□ -1.68
SH3RF1-202ENST00000502315 TRAV1-1A0A0B4J248 108 aa4.56□□□□□ -1.68
SH3RF1-202ENST00000502315 NCR2O95944 276 aa4.56□□□□□ -1.68
SH3RF1-202ENST00000502315 IGLC6P0CF74 106 aa4.56□□□□□ -1.68
SH3RF1-202ENST00000502315 MT1HL1P0DM35 61 aa4.56□□□□□ -1.68
SH3RF1-202ENST00000502315 RAB5CP51148 216 aa4.56□□□□□ -1.68
SH3RF1-202ENST00000502315 RASL11AQ6T310 242 aa4.56□□□□□ -1.68
SH3RF1-202ENST00000502315 DPH3Q96FX2 82 aa4.56□□□□□ -1.68
SH3RF1-202ENST00000502315 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.56□□□□□ -1.68
SH3RF1-202ENST00000502315 A0A1B0GV50 99 aa4.55□□□□□ -1.68
SH3RF1-202ENST00000502315 hDV102S1A0JD36 115 aa4.55□□□□□ -1.68
SH3RF1-202ENST00000502315 UBE2L6O14933 153 aa4.55□□□□□ -1.68
SH3RF1-202ENST00000502315 TAGLN2P37802 199 aaKnown RBP4.55□□□□□ -1.68
SH3RF1-202ENST00000502315 RPS10P46783 165 aaKnown RBP4.55□□□□□ -1.68
SH3RF1-202ENST00000502315 EIF5AL1Q6IS14 154 aaKnown RBP4.55□□□□□ -1.68
SH3RF1-202ENST00000502315 FER1L6-AS1Q8NA97 138 aa4.55□□□□□ -1.68
SH3RF1-202ENST00000502315 C20orf203Q8NBC4 194 aa4.55□□□□□ -1.68
SH3RF1-202ENST00000502315 FAM213BQ8TBF2 198 aa4.55□□□□□ -1.68
SH3RF1-202ENST00000502315 SPACA4Q8TDM5 124 aa4.55□□□□□ -1.68
SH3RF1-202ENST00000502315 C11orf52Q96A22 123 aa4.55□□□□□ -1.68
SH3RF1-202ENST00000502315 LINC01600Q96MT4 127 aa4.55□□□□□ -1.68
SH3RF1-202ENST00000502315 CNFNQ9BYD5 112 aa4.55□□□□□ -1.68
SH3RF1-202ENST00000502315 DPH3P1Q9H4G8 78 aa4.55□□□□□ -1.68
SH3RF1-202ENST00000502315 A0A087WYN8 130 aa4.54□□□□□ -1.68
SH3RF1-202ENST00000502315 C19orf71A6NCJ1 209 aa4.54□□□□□ -1.68
SH3RF1-202ENST00000502315 PDE6DO43924 150 aa4.54□□□□□ -1.68
SH3RF1-202ENST00000502315 NDUFS6O75380 124 aaKnown RBP4.54□□□□□ -1.68
SH3RF1-202ENST00000502315 ZNF25P17030 456 aaPredicted RBP4.54□□□□□ -1.68
SH3RF1-202ENST00000502315 RPL35P42766 123 aaKnown RBP4.54□□□□□ -1.68
SH3RF1-202ENST00000502315 CCL20P78556 96 aa4.54□□□□□ -1.68
SH3RF1-202ENST00000502315 GAGE6Q13070 117 aa4.54□□□□□ -1.68
SH3RF1-202ENST00000502315 COTL1Q14019 142 aa4.54□□□□□ -1.68
SH3RF1-202ENST00000502315 KRTAP4-11Q9BYQ6 195 aa4.54□□□□□ -1.68
SH3RF1-202ENST00000502315 MED9Q9NWA0 146 aa4.54□□□□□ -1.68
SH3RF1-202ENST00000502315 CCL25O15444 150 aa4.53□□□□□ -1.68
SH3RF1-202ENST00000502315 HNRNPA3P51991 378 aaKnown RBP4.53□□□□□ -1.68
SH3RF1-202ENST00000502315 BLOC1S1P78537 153 aa4.53□□□□□ -1.68
SH3RF1-202ENST00000502315 SPINK6Q6UWN8 80 aa4.53□□□□□ -1.68
SH3RF1-202ENST00000502315 TNXBP22105 4242 aa4.53□□□□□ -1.68
SH3RF1-202ENST00000502315 IGLV4-60A0A075B6I1 120 aa4.52□□□□□ -1.69
SH3RF1-202ENST00000502315 GVQW2A0A096LPI5 108 aaPredicted RBP4.52□□□□□ -1.69
SH3RF1-202ENST00000502315 SLPIP03973 132 aa4.52□□□□□ -1.69
SH3RF1-202ENST00000502315 NTF3P20783 257 aa4.52□□□□□ -1.69
SH3RF1-202ENST00000502315 S100A1P23297 94 aa4.52□□□□□ -1.69
SH3RF1-202ENST00000502315 SRSF3P84103 164 aaKnown RBP4.52□□□□□ -1.69
SH3RF1-202ENST00000502315 SUMO4Q6EEV6 95 aa4.52□□□□□ -1.69
SH3RF1-202ENST00000502315 REG3GQ6UW15 175 aa4.52□□□□□ -1.69
SH3RF1-202ENST00000502315 SMIM15Q7Z3B0 74 aa4.52□□□□□ -1.69
SH3RF1-202ENST00000502315 OR2D3Q8NGH3 330 aa4.52□□□□□ -1.69
SH3RF1-202ENST00000502315 UBR4Q5T4S7 5183 aa4.52□□□□□ -1.69
SH3RF1-202ENST00000502315 RAB19A4D1S5 217 aa4.51□□□□□ -1.69
SH3RF1-202ENST00000502315 PANO1I0J062 215 aa4.51□□□□□ -1.69
SH3RF1-202ENST00000502315 IFNA1P01562 189 aa4.51□□□□□ -1.69
SH3RF1-202ENST00000502315 MGPP08493 103 aa4.51□□□□□ -1.69
SH3RF1-202ENST00000502315 CTRLP40313 264 aa4.51□□□□□ -1.69
SH3RF1-202ENST00000502315 AMTP48728 403 aa4.51□□□□□ -1.69
SH3RF1-202ENST00000502315 GNG4P50150 75 aa4.51□□□□□ -1.69
SH3RF1-202ENST00000502315 LYPD6BQ8NI32 183 aa4.51□□□□□ -1.69
SH3RF1-202ENST00000502315 A0A0J9YXV3 536 aa4.5□□□□□ -1.69
SH3RF1-202ENST00000502315 C9JQL5 133 aa4.5□□□□□ -1.69
SH3RF1-202ENST00000502315 PHOX2AO14813 284 aa4.5□□□□□ -1.69
SH3RF1-202ENST00000502315 KRTAP10-8P60410 259 aa4.5□□□□□ -1.69
SH3RF1-202ENST00000502315 MEF2BQ02080 365 aaPredicted RBP4.5□□□□□ -1.69
SH3RF1-202ENST00000502315 COX6A2Q02221 97 aa4.5□□□□□ -1.69
SH3RF1-202ENST00000502315 SMAGPQ0VAQ4 97 aa4.5□□□□□ -1.69
SH3RF1-202ENST00000502315 CENPWQ5EE01 88 aa4.5□□□□□ -1.69
SH3RF1-202ENST00000502315 CLPSL2Q6UWE3 100 aa4.5□□□□□ -1.69
SH3RF1-202ENST00000502315 LYZL1Q6UWQ5 148 aa4.5□□□□□ -1.69
SH3RF1-202ENST00000502315 C15orf56Q8N910 161 aa4.5□□□□□ -1.69
SH3RF1-202ENST00000502315 OR5A1Q8NGJ0 315 aa4.5□□□□□ -1.69
SH3RF1-202ENST00000502315 IGHV1-58A0A0C4DH39 117 aa4.49□□□□□ -1.69
SH3RF1-202ENST00000502315 MUC21A0A0G2JKD1 596 aa4.49□□□□□ -1.69
SH3RF1-202ENST00000502315 TRBV6-5A0A0K0K1A5 114 aa4.49□□□□□ -1.69
SH3RF1-202ENST00000502315 MUC21A0A140T8X8 626 aa4.49□□□□□ -1.69
SH3RF1-202ENST00000502315 GAGE12HA6NDE8 117 aa4.49□□□□□ -1.69
SH3RF1-202ENST00000502315 ADCYAP1P18509 176 aa4.49□□□□□ -1.69
SH3RF1-202ENST00000502315 FOXA3P55318 350 aaPredicted RBP4.49□□□□□ -1.69
SH3RF1-202ENST00000502315 PRR3P79522 188 aaKnown RBP4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms