RNA–Protein interactions for RNA: ENST00000502313.1

HMGB1P21-201, Transcript of high mobility group box 1 pseudogene 21, humanhuman

BASIC

Gene HMGB1P21, Length 581 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P21-201ENST00000502313 SLC25A20O43772 301 aa2.81□□□□□ -1.96
HMGB1P21-201ENST00000502313 SSSCA1O60232 199 aa2.81□□□□□ -1.96
HMGB1P21-201ENST00000502313 P0DMU3 169 aa2.81□□□□□ -1.96
HMGB1P21-201ENST00000502313 FAM231AP0DMU4 169 aa2.81□□□□□ -1.96
HMGB1P21-201ENST00000502313 FAM231CP0DMU5 169 aa2.81□□□□□ -1.96
HMGB1P21-201ENST00000502313 DEFA4P12838 97 aa2.81□□□□□ -1.96
HMGB1P21-201ENST00000502313 S100A4P26447 101 aaKnown RBP2.81□□□□□ -1.96
HMGB1P21-201ENST00000502313 RPL27AP46776 148 aaKnown RBP2.81□□□□□ -1.96
HMGB1P21-201ENST00000502313 PLGLAQ15195 96 aa2.81□□□□□ -1.96
HMGB1P21-201ENST00000502313 Q5BKY6 102 aa2.81□□□□□ -1.96
HMGB1P21-201ENST00000502313 ALKAL2Q6UX46 152 aa2.81□□□□□ -1.96
HMGB1P21-201ENST00000502313 BPIFA4PQ86YQ2 179 aa2.81□□□□□ -1.96
HMGB1P21-201ENST00000502313 SVBPQ8N300 66 aa2.81□□□□□ -1.96
HMGB1P21-201ENST00000502313 WFDC11Q8NEX6 87 aa2.81□□□□□ -1.96
HMGB1P21-201ENST00000502313 BRK1Q8WUW1 75 aa2.81□□□□□ -1.96
HMGB1P21-201ENST00000502313 SFT2D1Q8WV19 159 aa2.81□□□□□ -1.96
HMGB1P21-201ENST00000502313 UBE2WQ96B02 151 aa2.81□□□□□ -1.96
HMGB1P21-201ENST00000502313 GAFA1Q96PS6 74 aa2.81□□□□□ -1.96
HMGB1P21-201ENST00000502313 PSMG3Q9BT73 122 aaPredicted RBP2.81□□□□□ -1.96
HMGB1P21-201ENST00000502313 UPK3BQ9BT76 320 aa2.81□□□□□ -1.96
HMGB1P21-201ENST00000502313 BET1LQ9NYM9 111 aa2.81□□□□□ -1.96
HMGB1P21-201ENST00000502313 TIMM9Q9Y5J7 89 aa2.81□□□□□ -1.96
HMGB1P21-201ENST00000502313 IGLV2-33A0A075B6J2 118 aaPredicted RBP2.8□□□□□ -1.96
HMGB1P21-201ENST00000502313 IGKV1OR2-108A0A075B7D4 117 aa2.8□□□□□ -1.96
HMGB1P21-201ENST00000502313 TRAV1-1A0A0B4J248 108 aa2.8□□□□□ -1.96
HMGB1P21-201ENST00000502313 A0A0B4J2C4 111 aa2.8□□□□□ -1.96
HMGB1P21-201ENST00000502313 C19orf71A6NCJ1 209 aa2.8□□□□□ -1.96
HMGB1P21-201ENST00000502313 FAM24AA6NFZ4 105 aa2.8□□□□□ -1.96
HMGB1P21-201ENST00000502313 F6UZH7 168 aa2.8□□□□□ -1.96
HMGB1P21-201ENST00000502313 K7ERJ3 54 aa2.8□□□□□ -1.96
HMGB1P21-201ENST00000502313 SH2D1AO60880 128 aa2.8□□□□□ -1.96
HMGB1P21-201ENST00000502313 LINC00694P0DN24 101 aa2.8□□□□□ -1.96
HMGB1P21-201ENST00000502313 FABP2P12104 132 aa2.8□□□□□ -1.96
HMGB1P21-201ENST00000502313 SLC25A16P16260 332 aa2.8□□□□□ -1.96
HMGB1P21-201ENST00000502313 LGALS3P17931 250 aaKnown RBP2.8□□□□□ -1.96
HMGB1P21-201ENST00000502313 AZU1P20160 251 aa2.8□□□□□ -1.96
HMGB1P21-201ENST00000502313 DYNLT3P51808 116 aa2.8□□□□□ -1.96
HMGB1P21-201ENST00000502313 UBE2BP63146 152 aa2.8□□□□□ -1.96
HMGB1P21-201ENST00000502313 ZNF816Q0VGE8 651 aaPredicted RBP2.8□□□□□ -1.96
HMGB1P21-201ENST00000502313 DEFB116Q30KQ4 102 aa2.8□□□□□ -1.96
HMGB1P21-201ENST00000502313 OCIAD2Q56VL3 154 aa2.8□□□□□ -1.96
HMGB1P21-201ENST00000502313 ZNF833PQ6ZTB9 187 aa2.8□□□□□ -1.96
HMGB1P21-201ENST00000502313 SLC35E3Q7Z769 313 aa2.8□□□□□ -1.96
HMGB1P21-201ENST00000502313 CCL19Q99731 98 aa2.8□□□□□ -1.96
HMGB1P21-201ENST00000502313 NAA38Q9BRA0 125 aaKnown RBP2.8□□□□□ -1.96
HMGB1P21-201ENST00000502313 SLC35B3Q9H1N7 401 aa2.8□□□□□ -1.96
HMGB1P21-201ENST00000502313 U3KQK5 164 aa2.8□□□□□ -1.96
HMGB1P21-201ENST00000502313 TRBV24-1A0A075B6N3 115 aa2.79□□□□□ -1.96
HMGB1P21-201ENST00000502313 TRAV14DV4A0A0A6YYC5 116 aa2.79□□□□□ -1.96
HMGB1P21-201ENST00000502313 MDFIC2A0A1B0GVS7 189 aa2.79□□□□□ -1.96
HMGB1P21-201ENST00000502313 A0A1B0GW54 56 aa2.79□□□□□ -1.96
HMGB1P21-201ENST00000502313 TMEM218A2RU14 115 aa2.79□□□□□ -1.96
HMGB1P21-201ENST00000502313 A8MWP6 167 aa2.79□□□□□ -1.96
HMGB1P21-201ENST00000502313 B4DSR2 109 aa2.79□□□□□ -1.96
HMGB1P21-201ENST00000502313 CST7O76096 145 aa2.79□□□□□ -1.96
HMGB1P21-201ENST00000502313 IGLV1-47P01700 117 aa2.79□□□□□ -1.96
HMGB1P21-201ENST00000502313 IGKV1-16P04430 117 aa2.79□□□□□ -1.96
HMGB1P21-201ENST00000502313 IGHV3-30-3P0DP02 117 aa2.79□□□□□ -1.96
HMGB1P21-201ENST00000502313 HIST1H1BP16401 226 aaKnown RBP2.79□□□□□ -1.96
HMGB1P21-201ENST00000502313 SRP14P37108 136 aaKnown RBP2.79□□□□□ -1.96
HMGB1P21-201ENST00000502313 ZNF137PP52743 207 aa2.79□□□□□ -1.96
HMGB1P21-201ENST00000502313 HES1Q14469 280 aa2.79□□□□□ -1.96
HMGB1P21-201ENST00000502313 C2orf83Q53S99 150 aa2.79□□□□□ -1.96
HMGB1P21-201ENST00000502313 KHDC3LQ587J8 217 aa2.79□□□□□ -1.96
HMGB1P21-201ENST00000502313 FAM74A1Q5RGS3 127 aa2.79□□□□□ -1.96
HMGB1P21-201ENST00000502313 RPL7L1Q6DKI1 246 aaKnown RBP2.79□□□□□ -1.96
HMGB1P21-201ENST00000502313 TMEM14EPQ6UXP3 125 aa2.79□□□□□ -1.96
HMGB1P21-201ENST00000502313 ZFP2Q6ZN57 461 aa2.79□□□□□ -1.96
HMGB1P21-201ENST00000502313 FAM216BQ8N7L0 139 aa2.79□□□□□ -1.96
HMGB1P21-201ENST00000502313 CYB561D1Q8N8Q1 229 aa2.79□□□□□ -1.96
HMGB1P21-201ENST00000502313 TMEM167AQ8TBQ9 72 aa2.79□□□□□ -1.96
HMGB1P21-201ENST00000502313 OR4C12Q96R67 309 aa2.79□□□□□ -1.96
HMGB1P21-201ENST00000502313 SEC11CQ9BY50 192 aa2.79□□□□□ -1.96
HMGB1P21-201ENST00000502313 MRPL32Q9BYC8 188 aaKnown RBP2.79□□□□□ -1.96
HMGB1P21-201ENST00000502313 C16orf95Q9H693 158 aa2.79□□□□□ -1.96
HMGB1P21-201ENST00000502313 TMEM14BQ9NUH8 114 aa2.79□□□□□ -1.96
HMGB1P21-201ENST00000502313 MRPL16Q9NX20 251 aaKnown RBP2.79□□□□□ -1.96
HMGB1P21-201ENST00000502313 A8MUU9 505 aa2.78□□□□□ -1.96
HMGB1P21-201ENST00000502313 J3QR89 54 aa2.78□□□□□ -1.96
HMGB1P21-201ENST00000502313 LY6HO94772 140 aa2.78□□□□□ -1.96
HMGB1P21-201ENST00000502313 APOC3P02656 99 aa2.78□□□□□ -1.96
HMGB1P21-201ENST00000502313 NMBP08949 121 aa2.78□□□□□ -1.96
HMGB1P21-201ENST00000502313 METTL15P1P0C7V9 234 aa2.78□□□□□ -1.96
HMGB1P21-201ENST00000502313 IGLC6P0CF74 106 aa2.78□□□□□ -1.96
HMGB1P21-201ENST00000502313 SAA2P0DJI9 122 aaPredicted RBP2.78□□□□□ -1.96
HMGB1P21-201ENST00000502313 RNASE4P34096 147 aaKnown RBP2.78□□□□□ -1.96
HMGB1P21-201ENST00000502313 PRCDQ00LT1 54 aa2.78□□□□□ -1.96
HMGB1P21-201ENST00000502313 DEFA5Q01523 94 aa2.78□□□□□ -1.96
HMGB1P21-201ENST00000502313 EIF4EBP1Q13541 118 aaPredicted RBP2.78□□□□□ -1.96
HMGB1P21-201ENST00000502313 RPL39P5Q59GN2 51 aa2.78□□□□□ -1.96
HMGB1P21-201ENST00000502313 LINC00305Q7Z4B0 112 aa2.78□□□□□ -1.96
HMGB1P21-201ENST00000502313 FAM213BQ8TBF2 198 aa2.78□□□□□ -1.96
HMGB1P21-201ENST00000502313 SMR3AQ99954 134 aa2.78□□□□□ -1.96
HMGB1P21-201ENST00000502313 CYTL1Q9NRR1 136 aa2.78□□□□□ -1.96
HMGB1P21-201ENST00000502313 NDUFA4L2Q9NRX3 87 aa2.78□□□□□ -1.96
HMGB1P21-201ENST00000502313 TMEM167BQ9NRX6 74 aa2.78□□□□□ -1.96
HMGB1P21-201ENST00000502313 TNFRSF19Q9NS68 423 aa2.78□□□□□ -1.96
HMGB1P21-201ENST00000502313 CR1P17927 2039 aa2.78□□□□□ -1.96
HMGB1P21-201ENST00000502313 NOTCH1P46531 2555 aa2.77□□□□□ -1.97
HMGB1P21-201ENST00000502313 MALRD1Q5VYJ5 2156 aa2.77□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms