RNA–Protein interactions for RNA: ENST00000501038.6

PLXND1-202, Transcript of plexin D1, humanhuman

TSL 1 (best)

Gene PLXND1, Length 1,633 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLXND1-202ENST00000501038 PAPPA-AS1Q5QFB9 102 aa13.25□□□□□ -0.29
PLXND1-202ENST00000501038 COL5A1-AS1Q5SY13 56 aa13.25□□□□□ -0.29
PLXND1-202ENST00000501038 ZNRF2Q8NHG8 242 aa13.25□□□□□ -0.29
PLXND1-202ENST00000501038 CHCHD7Q9BUK0 85 aa13.25□□□□□ -0.29
PLXND1-202ENST00000501038 PYGO1Q9Y3Y4 419 aa13.25□□□□□ -0.29
PLXND1-202ENST00000501038 IGLV4-69A0A075B6H9 119 aa13.24□□□□□ -0.29
PLXND1-202ENST00000501038 SMIM9A6NGZ8 99 aa13.24□□□□□ -0.29
PLXND1-202ENST00000501038 RPL36AP83881 106 aaKnown RBP13.24□□□□□ -0.29
PLXND1-202ENST00000501038 COTL1Q14019 142 aa13.24□□□□□ -0.29
PLXND1-202ENST00000501038 KIR2DL5BQ8NHK3 375 aa13.24□□□□□ -0.29
PLXND1-202ENST00000501038 RPL36ALQ969Q0 106 aaKnown RBP13.24□□□□□ -0.29
PLXND1-202ENST00000501038 TRBV7-3A0A075B6L6 115 aa13.24□□□□□ -0.29
PLXND1-202ENST00000501038 IGHV3-38A0A0C4DH36 116 aa13.24□□□□□ -0.29
PLXND1-202ENST00000501038 OPRPNQ99935 248 aaPredicted RBP13.24□□□□□ -0.29
PLXND1-202ENST00000501038 X6R8D5 127 aa13.24□□□□□ -0.29
PLXND1-202ENST00000501038 IGLV4-3A0A075B6K6 122 aa13.23□□□□□ -0.29
PLXND1-202ENST00000501038 APOC4P55056 127 aa13.23□□□□□ -0.29
PLXND1-202ENST00000501038 MPV17L2Q567V2 206 aa13.23□□□□□ -0.29
PLXND1-202ENST00000501038 SLC25A29Q8N8R3 303 aa13.23□□□□□ -0.29
PLXND1-202ENST00000501038 CYSRT1A8MQ03 144 aa13.22□□□□□ -0.29
PLXND1-202ENST00000501038 TMEM97Q5BJF2 176 aa13.22□□□□□ -0.29
PLXND1-202ENST00000501038 C12orf54Q6X4T0 127 aa13.22□□□□□ -0.29
PLXND1-202ENST00000501038 C11orf86A6NJI1 115 aa13.21□□□□□ -0.29
PLXND1-202ENST00000501038 NPSP0C0P6 89 aa13.21□□□□□ -0.29
PLXND1-202ENST00000501038 EMP1P54849 157 aa13.21□□□□□ -0.29
PLXND1-202ENST00000501038 TEP1Q99973 2627 aaKnown RBP13.21□□□□□ -0.29
PLXND1-202ENST00000501038 BVES-AS1Q5T3Y7 98 aa13.21□□□□□ -0.3
PLXND1-202ENST00000501038 LINC00612Q8N6U2 182 aa13.21□□□□□ -0.3
PLXND1-202ENST00000501038 TTTY13Q9BZ97 58 aa13.21□□□□□ -0.3
PLXND1-202ENST00000501038 SPANXA1Q9NS26 97 aa13.21□□□□□ -0.3
PLXND1-202ENST00000501038 TRGV4A0A0C4DH28 118 aa13.2□□□□□ -0.3
PLXND1-202ENST00000501038 UBE2D3P61077 147 aa13.2□□□□□ -0.3
PLXND1-202ENST00000501038 UBE2D2P62837 147 aa13.2□□□□□ -0.3
PLXND1-202ENST00000501038 VCX2Q9H322 139 aa13.2□□□□□ -0.3
PLXND1-202ENST00000501038 ZMAT5Q9UDW3 170 aaKnown RBP13.2□□□□□ -0.3
PLXND1-202ENST00000501038 NIPBLQ6KC79 2804 aaeCLIP13.19□□□□□ -0.3
PLXND1-202ENST00000501038 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.19□□□□□ -0.3
PLXND1-202ENST00000501038 TRBV6-4A0A1B0GX49 114 aa13.19□□□□□ -0.3
PLXND1-202ENST00000501038 IGKV2-29A2NJV5 120 aaPredicted RBP13.19□□□□□ -0.3
PLXND1-202ENST00000501038 GAGE12JA6NER3 117 aa13.19□□□□□ -0.3
PLXND1-202ENST00000501038 E9PLD3 99 aa13.19□□□□□ -0.3
PLXND1-202ENST00000501038 CRYBA4P53673 196 aa13.19□□□□□ -0.3
PLXND1-202ENST00000501038 GAGE1Q13065 139 aa13.19□□□□□ -0.3
PLXND1-202ENST00000501038 GAGE4Q13068 117 aa13.19□□□□□ -0.3
PLXND1-202ENST00000501038 GAGE5Q13069 117 aa13.19□□□□□ -0.3
PLXND1-202ENST00000501038 GAGE13Q4V321 117 aa13.19□□□□□ -0.3
PLXND1-202ENST00000501038 DAZ4Q86SG3 579 aaKnown RBP13.19□□□□□ -0.3
PLXND1-202ENST00000501038 C3orf56Q8N813 242 aa13.19□□□□□ -0.3
PLXND1-202ENST00000501038 DAZ3Q9NR90 486 aaKnown RBP13.19□□□□□ -0.3
PLXND1-202ENST00000501038 UBE2D4Q9Y2X8 147 aa13.19□□□□□ -0.3
PLXND1-202ENST00000501038 NFE4Q86UQ8 179 aa13.18□□□□□ -0.3
PLXND1-202ENST00000501038 FAM104AQ969W3 186 aa13.18□□□□□ -0.3
PLXND1-202ENST00000501038 AMELXQ99217 191 aa13.18□□□□□ -0.3
PLXND1-202ENST00000501038 HIGD1BQ9P298 99 aa13.18□□□□□ -0.3
PLXND1-202ENST00000501038 TRAV8-6A0A0B4J262 113 aa13.17□□□□□ -0.3
PLXND1-202ENST00000501038 HERVK_113P61574 105 aa13.17□□□□□ -0.3
PLXND1-202ENST00000501038 FHL2Q14192 279 aa13.17□□□□□ -0.3
PLXND1-202ENST00000501038 SHISA2Q6UWI4 295 aa13.17□□□□□ -0.3
PLXND1-202ENST00000501038 MAPKAPK5-AS1Q8N8E1 139 aa13.17□□□□□ -0.3
PLXND1-202ENST00000501038 OR11H2Q8NH07 326 aa13.17□□□□□ -0.3
PLXND1-202ENST00000501038 TENM1Q9UKZ4 2725 aa13.17□□□□□ -0.3
PLXND1-202ENST00000501038 HSD52Q0P140 79 aa13.17□□□□□ -0.3
PLXND1-202ENST00000501038 DEFB135Q30KP9 77 aa13.17□□□□□ -0.3
PLXND1-202ENST00000501038 CEMP1Q6PRD7 247 aaPredicted RBP13.17□□□□□ -0.3
PLXND1-202ENST00000501038 ATRQ13535 2644 aa13.16□□□□□ -0.3
PLXND1-202ENST00000501038 LURAP1LQ8IV03 231 aa13.16□□□□□ -0.3
PLXND1-202ENST00000501038 PRADC1Q9BSG0 188 aa13.16□□□□□ -0.3
PLXND1-202ENST00000501038 CHAC1Q9BUX1 264 aa13.16□□□□□ -0.3
PLXND1-202ENST00000501038 TIMM21Q9BVV7 248 aa13.16□□□□□ -0.3
PLXND1-202ENST00000501038 NOTCH3Q9UM47 2321 aa13.16□□□□□ -0.3
PLXND1-202ENST00000501038 DEFB130BP0DP73 79 aa13.15□□□□□ -0.3
PLXND1-202ENST00000501038 DEFB130AP0DP74 79 aa13.15□□□□□ -0.3
PLXND1-202ENST00000501038 TRBV25-1A0A075B6N4 114 aa13.14□□□□□ -0.31
PLXND1-202ENST00000501038 IGHV4-30-4P0DP06 118 aa13.14□□□□□ -0.31
PLXND1-202ENST00000501038 TMEM170BQ5T4T1 132 aa13.14□□□□□ -0.31
PLXND1-202ENST00000501038 PRIMA1Q86XR5 153 aa13.14□□□□□ -0.31
PLXND1-202ENST00000501038 MAST4O15021 2626 aa13.14□□□□□ -0.31
PLXND1-202ENST00000501038 LOC100131303A0A0U1RQF7 123 aa13.13□□□□□ -0.31
PLXND1-202ENST00000501038 NTM-AS1Q6ZSK4 140 aa13.13□□□□□ -0.31
PLXND1-202ENST00000501038 A0A0J9YXV3 536 aa13.13□□□□□ -0.31
PLXND1-202ENST00000501038 MYMXA0A1B0GTQ4 84 aa13.13□□□□□ -0.31
PLXND1-202ENST00000501038 LYRM9A8MSI8 78 aa13.13□□□□□ -0.31
PLXND1-202ENST00000501038 MRPS36P82909 103 aaKnown RBP13.13□□□□□ -0.31
PLXND1-202ENST00000501038 Q6ZUT4 128 aa13.13□□□□□ -0.31
PLXND1-202ENST00000501038 GTSF1LQ9H1H1 148 aa13.13□□□□□ -0.31
PLXND1-202ENST00000501038 ZNF22P17026 224 aaPredicted RBP13.12□□□□□ -0.31
PLXND1-202ENST00000501038 OXLD1Q5BKU9 147 aa13.12□□□□□ -0.31
PLXND1-202ENST00000501038 SBSPONQ8IVN8 264 aa13.12□□□□□ -0.31
PLXND1-202ENST00000501038 ZNF25P17030 456 aaPredicted RBP13.11□□□□□ -0.31
PLXND1-202ENST00000501038 SEC11AP67812 179 aa13.11□□□□□ -0.31
PLXND1-202ENST00000501038 RNASE13Q5GAN3 156 aaKnown RBP13.11□□□□□ -0.31
PLXND1-202ENST00000501038 FAM222AQ5U5X8 452 aa13.11□□□□□ -0.31
PLXND1-202ENST00000501038 ORAOV1Q8WV07 137 aa13.11□□□□□ -0.31
PLXND1-202ENST00000501038 VWFP04275 2813 aa13.11□□□□□ -0.31
PLXND1-202ENST00000501038 IGHV4-28A0A0C4DH34 117 aa13.1□□□□□ -0.31
PLXND1-202ENST00000501038 TMEM223A0PJW6 202 aa13.1□□□□□ -0.31
PLXND1-202ENST00000501038 LINC00694P0DN24 101 aa13.1□□□□□ -0.31
PLXND1-202ENST00000501038 MIFP14174 115 aa13.1□□□□□ -0.31
PLXND1-202ENST00000501038 SMAGPQ0VAQ4 97 aa13.1□□□□□ -0.31
PLXND1-202ENST00000501038 DGAT2L7PQ6IED9 249 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 120.2 ms