RNA–Protein interactions for RNA: ENST00000499006.6

LINC01550-201, Transcript of long intergenic non-protein coding RNA 1550, humanhuman

TSL 1 (best)

Gene LINC01550, Length 1,458 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01550-201ENST00000499006 HIST1H2BKO60814 126 aa13.4□□□□□ -0.26
LINC01550-201ENST00000499006 HIST1H2BJP06899 126 aa13.4□□□□□ -0.26
LINC01550-201ENST00000499006 HIST1H2BOP23527 126 aa13.4□□□□□ -0.26
LINC01550-201ENST00000499006 HIST1H2BBP33778 126 aa13.4□□□□□ -0.26
LINC01550-201ENST00000499006 HIST1H2BDP58876 126 aa13.4□□□□□ -0.26
LINC01550-201ENST00000499006 HIST1H2BCP62807 126 aa13.4□□□□□ -0.26
LINC01550-201ENST00000499006 HIST2H2BEQ16778 126 aa13.4□□□□□ -0.26
LINC01550-201ENST00000499006 HIST2H2BFQ5QNW6 126 aaPredicted RBP13.4□□□□□ -0.26
LINC01550-201ENST00000499006 HIST1H2BHQ93079 126 aa13.4□□□□□ -0.26
LINC01550-201ENST00000499006 URB1-AS1Q96HZ7 61 aa13.4□□□□□ -0.26
LINC01550-201ENST00000499006 HIST1H2BNQ99877 126 aa13.4□□□□□ -0.26
LINC01550-201ENST00000499006 HIST1H2BMQ99879 126 aa13.4□□□□□ -0.26
LINC01550-201ENST00000499006 CHCHD7Q9BUK0 85 aa13.4□□□□□ -0.26
LINC01550-201ENST00000499006 DNAH1Q9P2D7 4330 aa13.39□□□□□ -0.27
LINC01550-201ENST00000499006 TRBV25-1A0A075B6N4 114 aa13.39□□□□□ -0.27
LINC01550-201ENST00000499006 IGHV1-24A0A0C4DH33 117 aa13.39□□□□□ -0.27
LINC01550-201ENST00000499006 K7EMI3 77 aa13.39□□□□□ -0.27
LINC01550-201ENST00000499006 ESDP10768 282 aa13.39□□□□□ -0.27
LINC01550-201ENST00000499006 UPK3BQ9BT76 320 aa13.39□□□□□ -0.27
LINC01550-201ENST00000499006 C1orf196B1AJZ1 125 aa13.38□□□□□ -0.27
LINC01550-201ENST00000499006 FCER1GP30273 86 aa13.38□□□□□ -0.27
LINC01550-201ENST00000499006 AMTP48728 403 aa13.38□□□□□ -0.27
LINC01550-201ENST00000499006 NIT1Q86X76 327 aa13.37□□□□□ -0.27
LINC01550-201ENST00000499006 LINC00614P0C842 121 aa13.36□□□□□ -0.27
LINC01550-201ENST00000499006 LGALS9CQ6DKI2 356 aa13.36□□□□□ -0.27
LINC01550-201ENST00000499006 TMEM243Q9BU79 118 aa13.36□□□□□ -0.27
LINC01550-201ENST00000499006 TRAV8-6A0A0B4J262 113 aa13.36□□□□□ -0.27
LINC01550-201ENST00000499006 LAGE3Q14657 143 aa13.36□□□□□ -0.27
LINC01550-201ENST00000499006 FA2HQ7L5A8 372 aa13.36□□□□□ -0.27
LINC01550-201ENST00000499006 WFDC10BQ8IUB3 73 aa13.36□□□□□ -0.27
LINC01550-201ENST00000499006 RAB5BP61020 215 aa13.35□□□□□ -0.27
LINC01550-201ENST00000499006 ORMDL2Q53FV1 153 aa13.35□□□□□ -0.27
LINC01550-201ENST00000499006 UBE2DNLQ8IWF7 75 aa13.35□□□□□ -0.27
LINC01550-201ENST00000499006 AP5S1Q9NUS5 200 aa13.35□□□□□ -0.27
LINC01550-201ENST00000499006 LINC00310P59036 64 aa13.34□□□□□ -0.27
LINC01550-201ENST00000499006 BAGE3Q86Y29 109 aa13.34□□□□□ -0.27
LINC01550-201ENST00000499006 C20orf203Q8NBC4 194 aa13.34□□□□□ -0.27
LINC01550-201ENST00000499006 ALMS1Q8TCU4 4167 aa13.33□□□□□ -0.27
LINC01550-201ENST00000499006 CHCHD1Q96BP2 118 aaKnown RBP13.33□□□□□ -0.28
LINC01550-201ENST00000499006 CHCHD5Q9BSY4 110 aa13.33□□□□□ -0.28
LINC01550-201ENST00000499006 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.32□□□□□ -0.28
LINC01550-201ENST00000499006 IGKV2-29A2NJV5 120 aaPredicted RBP13.32□□□□□ -0.28
LINC01550-201ENST00000499006 H7C423 109 aa13.32□□□□□ -0.28
LINC01550-201ENST00000499006 RNASEKQ6P5S7 137 aaKnown RBP13.32□□□□□ -0.28
LINC01550-201ENST00000499006 LINC00476Q8WZB0 136 aa13.32□□□□□ -0.28
LINC01550-201ENST00000499006 Q9H8V8 135 aa13.31□□□□□ -0.28
LINC01550-201ENST00000499006 UBE2L6O14933 153 aa13.3□□□□□ -0.28
LINC01550-201ENST00000499006 SIVA1O15304 175 aa13.3□□□□□ -0.28
LINC01550-201ENST00000499006 SERF1AO75920 110 aa13.3□□□□□ -0.28
LINC01550-201ENST00000499006 DNAH10OSP0CZ25 163 aa13.3□□□□□ -0.28
LINC01550-201ENST00000499006 RPL39P62891 51 aaKnown RBP13.3□□□□□ -0.28
LINC01550-201ENST00000499006 GAGE6Q13070 117 aa13.3□□□□□ -0.28
LINC01550-201ENST00000499006 LINC01556Q5JQF7 62 aa13.29□□□□□ -0.28
LINC01550-201ENST00000499006 COA6Q5JTJ3 125 aaKnown RBP13.29□□□□□ -0.28
LINC01550-201ENST00000499006 Q8N3U1 123 aa13.29□□□□□ -0.28
LINC01550-201ENST00000499006 A0A096LNJ9 63 aa13.29□□□□□ -0.28
LINC01550-201ENST00000499006 TMEM262E9PQX1 116 aa13.29□□□□□ -0.28
LINC01550-201ENST00000499006 NUPR1O60356 82 aa13.29□□□□□ -0.28
LINC01550-201ENST00000499006 PKIAP61925 76 aa13.29□□□□□ -0.28
LINC01550-201ENST00000499006 MPV17L2Q567V2 206 aa13.29□□□□□ -0.28
LINC01550-201ENST00000499006 MRPL52Q86TS9 123 aaKnown RBP13.29□□□□□ -0.28
LINC01550-201ENST00000499006 TMEM18Q96B42 140 aa13.29□□□□□ -0.28
LINC01550-201ENST00000499006 A0A1B0GUV1 79 aa13.28□□□□□ -0.28
LINC01550-201ENST00000499006 FGF6P10767 208 aa13.28□□□□□ -0.28
LINC01550-201ENST00000499006 BTF3P20290 206 aaKnown RBP13.28□□□□□ -0.28
LINC01550-201ENST00000499006 G0S2P27469 103 aa13.28□□□□□ -0.28
LINC01550-201ENST00000499006 C2orf66Q6UXQ4 117 aa13.28□□□□□ -0.28
LINC01550-201ENST00000499006 UBE2D4Q9Y2X8 147 aa13.28□□□□□ -0.28
LINC01550-201ENST00000499006 LY6G6CO95867 125 aa13.27□□□□□ -0.29
LINC01550-201ENST00000499006 TOMM6Q96B49 74 aa13.27□□□□□ -0.29
LINC01550-201ENST00000499006 TIMM21Q9BVV7 248 aa13.27□□□□□ -0.29
LINC01550-201ENST00000499006 CYSLTR1Q9Y271 337 aa13.27□□□□□ -0.29
LINC01550-201ENST00000499006 KMT2AQ03164 3969 aa13.26□□□□□ -0.29
LINC01550-201ENST00000499006 DNAH6Q9C0G6 4158 aa13.26□□□□□ -0.29
LINC01550-201ENST00000499006 A0A087WX48 190 aa13.26□□□□□ -0.29
LINC01550-201ENST00000499006 ZNF25P17030 456 aaPredicted RBP13.26□□□□□ -0.29
LINC01550-201ENST00000499006 NDUFA6P56556 154 aa13.26□□□□□ -0.29
LINC01550-201ENST00000499006 RBX1P62877 108 aa13.26□□□□□ -0.29
LINC01550-201ENST00000499006 PMCHL1Q16048 86 aa13.26□□□□□ -0.29
LINC01550-201ENST00000499006 CSDC2Q9Y534 153 aaKnown RBP13.26□□□□□ -0.29
LINC01550-201ENST00000499006 IGLV4-60A0A075B6I1 120 aa13.25□□□□□ -0.29
LINC01550-201ENST00000499006 HSBP1O75506 76 aa13.25□□□□□ -0.29
LINC01550-201ENST00000499006 IGHV3-30P01768 117 aa13.25□□□□□ -0.29
LINC01550-201ENST00000499006 IGHV3-33P01772 117 aa13.25□□□□□ -0.29
LINC01550-201ENST00000499006 IGHV3-30-3P0DP02 117 aa13.25□□□□□ -0.29
LINC01550-201ENST00000499006 IGHV3-30-5P0DP03 117 aa13.25□□□□□ -0.29
LINC01550-201ENST00000499006 Q8N976 141 aa13.25□□□□□ -0.29
LINC01550-201ENST00000499006 HBDP02042 147 aa13.24□□□□□ -0.29
LINC01550-201ENST00000499006 FAM104AQ969W3 186 aa13.24□□□□□ -0.29
LINC01550-201ENST00000499006 PYGO1Q9Y3Y4 419 aa13.24□□□□□ -0.29
LINC01550-201ENST00000499006 LINC01549A6NIU2 74 aa13.23□□□□□ -0.29
LINC01550-201ENST00000499006 IGIPA6NJ69 53 aa13.23□□□□□ -0.29
LINC01550-201ENST00000499006 SMAGPQ0VAQ4 97 aa13.23□□□□□ -0.29
LINC01550-201ENST00000499006 AMMECR1LQ6DCA0 310 aa13.23□□□□□ -0.29
LINC01550-201ENST00000499006 SPANXA1Q9NS26 97 aa13.23□□□□□ -0.29
LINC01550-201ENST00000499006 SACSQ9NZJ4 4579 aa13.23□□□□□ -0.29
LINC01550-201ENST00000499006 FAM19A2Q8N3H0 131 aa13.23□□□□□ -0.29
LINC01550-201ENST00000499006 K7EP13 123 aa13.22□□□□□ -0.29
LINC01550-201ENST00000499006 PDZD11Q5EBL8 140 aa13.22□□□□□ -0.29
LINC01550-201ENST00000499006 ERASQ7Z444 233 aa13.21□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms