RNA–Protein interactions for RNA: ENST00000498658.5

FXR1-222, Transcript of FMR1 autosomal homolog 1, human

TSL 2

Gene FXR1, Length 683 nt, Biotype retained intron, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FXR1-222	ENST00000498658	SRSF3	P84103	164 aa	Known RBP	7	□□□□□ -1.29
FXR1-222	ENST00000498658	MIA	Q16674	131 aa		7	□□□□□ -1.29
FXR1-222	ENST00000498658	ATRAID	Q6UW56	229 aa		7	□□□□□ -1.29
FXR1-222	ENST00000498658	TMEM243	Q9BU79	118 aa		7	□□□□□ -1.29
FXR1-222	ENST00000498658	C1orf43	Q9BWL3	253 aa		7	□□□□□ -1.29
FXR1-222	ENST00000498658	IGLV5-52	A0A0A0MRZ9	124 aa		6.99	□□□□□ -1.29
FXR1-222	ENST00000498658		A0A1B0GUV1	79 aa		6.99	□□□□□ -1.29
FXR1-222	ENST00000498658		A0A1B0GW15	77 aa		6.99	□□□□□ -1.29
FXR1-222	ENST00000498658	NCR2	O95944	276 aa		6.99	□□□□□ -1.29
FXR1-222	ENST00000498658	PPP1R17	O96001	155 aa		6.99	□□□□□ -1.29
FXR1-222	ENST00000498658	GCSH	P23434	173 aa		6.99	□□□□□ -1.29
FXR1-222	ENST00000498658	GAGE6	Q13070	117 aa		6.99	□□□□□ -1.29
FXR1-222	ENST00000498658		Q8N976	141 aa		6.99	□□□□□ -1.29
FXR1-222	ENST00000498658	NUP35	Q8NFH5	326 aa		6.99	□□□□□ -1.29
FXR1-222	ENST00000498658	MRAP2	Q96G30	205 aa		6.99	□□□□□ -1.29
FXR1-222	ENST00000498658	TRAV26-2	A0A0B4J265	109 aa		6.98	□□□□□ -1.29
FXR1-222	ENST00000498658	TRBV6-5	A0A0K0K1A5	114 aa		6.98	□□□□□ -1.29
FXR1-222	ENST00000498658	SMIM27	A0A1W2PRY6	76 aa		6.98	□□□□□ -1.29
FXR1-222	ENST00000498658	AMT	P48728	403 aa		6.98	□□□□□ -1.29
FXR1-222	ENST00000498658	RBX1	P62877	108 aa		6.98	□□□□□ -1.29
FXR1-222	ENST00000498658	PRR34	Q9NV39	138 aa		6.98	□□□□□ -1.29
FXR1-222	ENST00000498658	RYR1	P21817	5038 aa		6.97	□□□□□ -1.29
FXR1-222	ENST00000498658	SDHAF1	A6NFY7	115 aa		6.97	□□□□□ -1.29
FXR1-222	ENST00000498658		H7C423	109 aa		6.97	□□□□□ -1.29
FXR1-222	ENST00000498658	PPP1R2P9	O14990	202 aa		6.97	□□□□□ -1.29
FXR1-222	ENST00000498658	S100A8	P05109	93 aa		6.97	□□□□□ -1.29
FXR1-222	ENST00000498658	RAB4A	P20338	218 aa		6.97	□□□□□ -1.29
FXR1-222	ENST00000498658	PNRC1	Q12796	327 aa	Predicted RBP	6.97	□□□□□ -1.29
FXR1-222	ENST00000498658	C14orf177	Q52M58	125 aa		6.97	□□□□□ -1.29
FXR1-222	ENST00000498658	ENHO	Q6UWT2	76 aa		6.97	□□□□□ -1.29
FXR1-222	ENST00000498658	RPL39L	Q96EH5	51 aa	Known RBP	6.97	□□□□□ -1.29
FXR1-222	ENST00000498658	ST20	Q9HBF5	79 aa		6.97	□□□□□ -1.29
FXR1-222	ENST00000498658	TRAV8-4	A0A0B4J246	113 aa		6.96	□□□□□ -1.3
FXR1-222	ENST00000498658		I3L3M4	83 aa		6.96	□□□□□ -1.3
FXR1-222	ENST00000498658	APCS	P02743	223 aa		6.96	□□□□□ -1.3
FXR1-222	ENST00000498658	PMCH	P20382	165 aa		6.96	□□□□□ -1.3
FXR1-222	ENST00000498658	CLLU1	Q5K131	121 aa		6.96	□□□□□ -1.3
FXR1-222	ENST00000498658	LINC00269	Q8N2A0	174 aa		6.96	□□□□□ -1.3
FXR1-222	ENST00000498658	BAALC	Q8WXS3	180 aa		6.96	□□□□□ -1.3
FXR1-222	ENST00000498658	HSPG2	P98160	4391 aa		6.96	□□□□□ -1.3
FXR1-222	ENST00000498658	APOB	P04114	4563 aa	Known RBP	6.95	□□□□□ -1.3
FXR1-222	ENST00000498658	LINC00862	A6NCI5	91 aa		6.95	□□□□□ -1.3
FXR1-222	ENST00000498658		F8W036	122 aa		6.95	□□□□□ -1.3
FXR1-222	ENST00000498658	REG3A	Q06141	175 aa		6.95	□□□□□ -1.3
FXR1-222	ENST00000498658	AMN1	Q8IY45	258 aa		6.95	□□□□□ -1.3
FXR1-222	ENST00000498658	MAPKAPK5-AS1	Q8N8E1	139 aa		6.95	□□□□□ -1.3
FXR1-222	ENST00000498658	RNF185	Q96GF1	192 aa		6.95	□□□□□ -1.3
FXR1-222	ENST00000498658	LECT2	O14960	151 aa		6.94	□□□□□ -1.3
FXR1-222	ENST00000498658	ZNF25	P17030	456 aa	Predicted RBP	6.94	□□□□□ -1.3
FXR1-222	ENST00000498658	FUS	P35637	526 aa	Known RBP eCLIP	6.94	□□□□□ -1.3
FXR1-222	ENST00000498658	AMMECR1L	Q6DCA0	310 aa		6.94	□□□□□ -1.3
FXR1-222	ENST00000498658	C20orf203	Q8NBC4	194 aa		6.94	□□□□□ -1.3
FXR1-222	ENST00000498658	TMEM70	Q9BUB7	260 aa		6.94	□□□□□ -1.3
FXR1-222	ENST00000498658	KRTAP17-1	Q9BYP8	105 aa		6.94	□□□□□ -1.3
FXR1-222	ENST00000498658	TRBV27	A0A0K0K1C4	114 aa		6.93	□□□□□ -1.3
FXR1-222	ENST00000498658	VCY	O14598	125 aa		6.93	□□□□□ -1.3
FXR1-222	ENST00000498658	MT-ND4L	P03901	98 aa		6.93	□□□□□ -1.3
FXR1-222	ENST00000498658	CAMP	P49913	170 aa		6.93	□□□□□ -1.3
FXR1-222	ENST00000498658	KRTAP10-1	P60331	282 aa		6.93	□□□□□ -1.3
FXR1-222	ENST00000498658	HBB	P68871	147 aa		6.93	□□□□□ -1.3
FXR1-222	ENST00000498658	SMAGP	Q0VAQ4	97 aa		6.93	□□□□□ -1.3
FXR1-222	ENST00000498658	FAM104B	Q5XKR9	115 aa		6.93	□□□□□ -1.3
FXR1-222	ENST00000498658	UQCC3	Q6UW78	93 aa		6.93	□□□□□ -1.3
FXR1-222	ENST00000498658	ATP5L2	Q7Z4Y8	100 aa		6.93	□□□□□ -1.3
FXR1-222	ENST00000498658	ANAPC16	Q96DE5	110 aa		6.93	□□□□□ -1.3
FXR1-222	ENST00000498658	BTF3L4	Q96K17	158 aa		6.93	□□□□□ -1.3
FXR1-222	ENST00000498658	TCAP	O15273	167 aa		6.92	□□□□□ -1.3
FXR1-222	ENST00000498658	HLA-DQA1	P01909	254 aa		6.92	□□□□□ -1.3
FXR1-222	ENST00000498658	POLR2K	P53803	58 aa	Known RBP	6.92	□□□□□ -1.3
FXR1-222	ENST00000498658	SUMO2	P61956	95 aa	Known RBP	6.92	□□□□□ -1.3
FXR1-222	ENST00000498658	WFDC2	Q14508	124 aa		6.92	□□□□□ -1.3
FXR1-222	ENST00000498658	RNASEK	Q6P5S7	137 aa	Known RBP	6.92	□□□□□ -1.3
FXR1-222	ENST00000498658	CLPSL2	Q6UWE3	100 aa		6.92	□□□□□ -1.3
FXR1-222	ENST00000498658		Q8N1X5	172 aa		6.92	□□□□□ -1.3
FXR1-222	ENST00000498658	TMEM101	Q96IK0	257 aa		6.92	□□□□□ -1.3
FXR1-222	ENST00000498658	KIR2DL4	Q99706	377 aa		6.92	□□□□□ -1.3
FXR1-222	ENST00000498658	IGLV4-60	A0A075B6I1	120 aa		6.91	□□□□□ -1.3
FXR1-222	ENST00000498658	IGLV2-33	A0A075B6J2	118 aa	Predicted RBP	6.91	□□□□□ -1.3
FXR1-222	ENST00000498658	PPBP	P02775	128 aa		6.91	□□□□□ -1.3
FXR1-222	ENST00000498658	FCER1G	P30273	86 aa		6.91	□□□□□ -1.3
FXR1-222	ENST00000498658	CKS2	P33552	79 aa		6.91	□□□□□ -1.3
FXR1-222	ENST00000498658	CLRN3	Q8NCR9	226 aa		6.91	□□□□□ -1.3
FXR1-222	ENST00000498658	DEFB104A	Q8WTQ1	72 aa		6.91	□□□□□ -1.3
FXR1-222	ENST00000498658	C20orf78	Q9BR46	151 aa		6.91	□□□□□ -1.3
FXR1-222	ENST00000498658	TRBV24-1	A0A075B6N3	115 aa		6.9	□□□□□ -1.3
FXR1-222	ENST00000498658	IGKV2D-29	A0A075B6S2	120 aa	Predicted RBP	6.9	□□□□□ -1.3
FXR1-222	ENST00000498658		A0A1B0GXF2	115 aa		6.9	□□□□□ -1.3
FXR1-222	ENST00000498658	IGKV2-29	A2NJV5	120 aa	Predicted RBP	6.9	□□□□□ -1.3
FXR1-222	ENST00000498658	C7orf77	A4D0Y5	90 aa		6.9	□□□□□ -1.3
FXR1-222	ENST00000498658	USP17L23	D6RBM5	183 aa		6.9	□□□□□ -1.3
FXR1-222	ENST00000498658	TSHB	P01222	138 aa		6.9	□□□□□ -1.3
FXR1-222	ENST00000498658	FGF6	P10767	208 aa		6.9	□□□□□ -1.3
FXR1-222	ENST00000498658	ESD	P10768	282 aa		6.9	□□□□□ -1.3
FXR1-222	ENST00000498658	RPS10	P46783	165 aa	Known RBP	6.9	□□□□□ -1.3
FXR1-222	ENST00000498658	XG	P55808	180 aa		6.9	□□□□□ -1.3
FXR1-222	ENST00000498658	MRPL51	Q4U2R6	128 aa	Known RBP	6.9	□□□□□ -1.3
FXR1-222	ENST00000498658	DGAT2L7P	Q6IED9	249 aa		6.9	□□□□□ -1.3
FXR1-222	ENST00000498658	MRPL54	Q6P161	138 aa	Known RBP	6.9	□□□□□ -1.3
FXR1-222	ENST00000498658	NRAC	Q8N912	160 aa		6.9	□□□□□ -1.3
FXR1-222	ENST00000498658	TMEM18	Q96B42	140 aa		6.9	□□□□□ -1.3

Retrieved 100 of 20,778 RNA–protein pairs in 146.4 ms