RNA–Protein interactions for RNA: ENST00000498090.1

AFF3-215, Transcript of AF4/FMR2 family member 3, humanhuman

TSL 2

Gene AFF3, Length 1,673 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFF3-215ENST00000498090 GAGE13Q4V321 117 aa9.13□□□□□ -0.95
AFF3-215ENST00000498090 TMEM170BQ5T4T1 132 aa9.13□□□□□ -0.95
AFF3-215ENST00000498090 MORN3Q6PF18 240 aaPredicted RBP9.13□□□□□ -0.95
AFF3-215ENST00000498090 C4orf3Q8WVX3 66 aa9.13□□□□□ -0.95
AFF3-215ENST00000498090 SPAG8Q99932 426 aaPredicted RBP9.13□□□□□ -0.95
AFF3-215ENST00000498090 LINC00467Q9BRT7 94 aa9.13□□□□□ -0.95
AFF3-215ENST00000498090 PYGO1Q9Y3Y4 419 aa9.13□□□□□ -0.95
AFF3-215ENST00000498090 A8MWV9 139 aa9.12□□□□□ -0.95
AFF3-215ENST00000498090 LEPROTO15243 131 aa9.12□□□□□ -0.95
AFF3-215ENST00000498090 IGKV3-20P01619 116 aa9.12□□□□□ -0.95
AFF3-215ENST00000498090 LGALS3P17931 250 aaKnown RBP9.12□□□□□ -0.95
AFF3-215ENST00000498090 RPL24P83731 157 aaKnown RBP9.12□□□□□ -0.95
AFF3-215ENST00000498090 SLC25A29Q8N8R3 303 aa9.12□□□□□ -0.95
AFF3-215ENST00000498090 KLHL30-AS1Q8NEE0 82 aa9.12□□□□□ -0.95
AFF3-215ENST00000498090 MRPL16Q9NX20 251 aaKnown RBP9.12□□□□□ -0.95
AFF3-215ENST00000498090 STAB1Q9NY15 2570 aa9.12□□□□□ -0.95
AFF3-215ENST00000498090 A0A1W2PRX2 142 aa9.11□□□□□ -0.95
AFF3-215ENST00000498090 J3QQQ9 107 aa9.11□□□□□ -0.95
AFF3-215ENST00000498090 PLEKHB2Q96CS7 222 aa9.11□□□□□ -0.95
AFF3-215ENST00000498090 DUX3Q96PT4 197 aa9.11□□□□□ -0.95
AFF3-215ENST00000498090 PGPEP1Q9NXJ5 209 aa9.11□□□□□ -0.95
AFF3-215ENST00000498090 SELENOKQ9Y6D0 94 aa9.11□□□□□ -0.95
AFF3-215ENST00000498090 ZNRF2Q8NHG8 242 aa9.1□□□□□ -0.95
AFF3-215ENST00000498090 DLX4Q92988 240 aaPredicted RBP9.1□□□□□ -0.95
AFF3-215ENST00000498090 VCX2Q9H322 139 aa9.1□□□□□ -0.95
AFF3-215ENST00000498090 TSSC4Q9Y5U2 329 aaPredicted RBP9.1□□□□□ -0.95
AFF3-215ENST00000498090 TENM1Q9UKZ4 2725 aa9.1□□□□□ -0.95
AFF3-215ENST00000498090 TMEM223A0PJW6 202 aa9.1□□□□□ -0.95
AFF3-215ENST00000498090 H3BMG7 143 aa9.1□□□□□ -0.95
AFF3-215ENST00000498090 M0R2P5 195 aa9.1□□□□□ -0.95
AFF3-215ENST00000498090 RHODO00212 210 aa9.1□□□□□ -0.95
AFF3-215ENST00000498090 ZNF415Q09FC8 603 aa9.1□□□□□ -0.95
AFF3-215ENST00000498090 TRBV20-1A0A075B6N2 111 aa9.09□□□□□ -0.95
AFF3-215ENST00000498090 TEX48A0A1B0GUV7 120 aa9.09□□□□□ -0.95
AFF3-215ENST00000498090 H3BMM0 161 aa9.09□□□□□ -0.95
AFF3-215ENST00000498090 IGHV3-30P01768 117 aa9.09□□□□□ -0.95
AFF3-215ENST00000498090 P0DMU3 169 aa9.09□□□□□ -0.95
AFF3-215ENST00000498090 FAM231AP0DMU4 169 aa9.09□□□□□ -0.95
AFF3-215ENST00000498090 FAM231CP0DMU5 169 aa9.09□□□□□ -0.95
AFF3-215ENST00000498090 IGHV3-30-5P0DP03 117 aa9.09□□□□□ -0.95
AFF3-215ENST00000498090 SLURP1P55000 103 aa9.09□□□□□ -0.95
AFF3-215ENST00000498090 ATP6V0E2Q8NHE4 81 aa9.09□□□□□ -0.95
AFF3-215ENST00000498090 RAX2Q96IS3 184 aa9.09□□□□□ -0.95
AFF3-215ENST00000498090 CLUHP3Q96NS8 147 aa9.09□□□□□ -0.95
AFF3-215ENST00000498090 NDUFA11Q86Y39 141 aa9.08□□□□□ -0.96
AFF3-215ENST00000498090 DNAJC30Q96LL9 226 aa9.08□□□□□ -0.96
AFF3-215ENST00000498090 SPXQ9BT56 116 aa9.08□□□□□ -0.96
AFF3-215ENST00000498090 PRO0461Q9UI25 63 aa9.08□□□□□ -0.96
AFF3-215ENST00000498090 TNFRSF18Q9Y5U5 241 aa9.08□□□□□ -0.96
AFF3-215ENST00000498090 IGLV4-3A0A075B6K6 122 aa9.07□□□□□ -0.96
AFF3-215ENST00000498090 DEFB131AP59861 70 aa9.07□□□□□ -0.96
AFF3-215ENST00000498090 UBE2D3P61077 147 aa9.07□□□□□ -0.96
AFF3-215ENST00000498090 UBE2D2P62837 147 aa9.07□□□□□ -0.96
AFF3-215ENST00000498090 FHL3Q13643 280 aa9.07□□□□□ -0.96
AFF3-215ENST00000498090 AMELXQ99217 191 aa9.07□□□□□ -0.96
AFF3-215ENST00000498090 TMEM238C9JI98 176 aa9.07□□□□□ -0.96
AFF3-215ENST00000498090 TSPAN13O95857 204 aa9.07□□□□□ -0.96
AFF3-215ENST00000498090 EMP1P54849 157 aa9.07□□□□□ -0.96
AFF3-215ENST00000498090 WFDC2Q14508 124 aa9.07□□□□□ -0.96
AFF3-215ENST00000498090 CITED1Q99966 193 aa9.07□□□□□ -0.96
AFF3-215ENST00000498090 SPANXA1Q9NS26 97 aa9.07□□□□□ -0.96
AFF3-215ENST00000498090 MUC4Q99102 2169 aa9.06□□□□□ -0.96
AFF3-215ENST00000498090 SCGB1A1P11684 91 aa9.06□□□□□ -0.96
AFF3-215ENST00000498090 ZNF22P17026 224 aaPredicted RBP9.06□□□□□ -0.96
AFF3-215ENST00000498090 TSPEAR-AS2P59090 65 aa9.06□□□□□ -0.96
AFF3-215ENST00000498090 C10orf126Q8N4M7 172 aa9.06□□□□□ -0.96
AFF3-215ENST00000498090 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.05□□□□□ -0.96
AFF3-215ENST00000498090 TRAV25A0A0B4J276 109 aa9.05□□□□□ -0.96
AFF3-215ENST00000498090 KNCNA6PVL3 124 aa9.05□□□□□ -0.96
AFF3-215ENST00000498090 CCL24O00175 119 aa9.05□□□□□ -0.96
AFF3-215ENST00000498090 MRPS36P82909 103 aaKnown RBP9.05□□□□□ -0.96
AFF3-215ENST00000498090 DYNLRB2Q8TF09 96 aa9.05□□□□□ -0.96
AFF3-215ENST00000498090 PRO1854Q9UHT4 67 aa9.05□□□□□ -0.96
AFF3-215ENST00000498090 INSP01308 110 aa9.04□□□□□ -0.96
AFF3-215ENST00000498090 RBMY1A1P0DJD3 496 aaKnown RBP9.04□□□□□ -0.96
AFF3-215ENST00000498090 RBMY1CP0DJD4 496 aa9.04□□□□□ -0.96
AFF3-215ENST00000498090 RBMY1FQ15415 496 aaKnown RBP9.04□□□□□ -0.96
AFF3-215ENST00000498090 CFAP126Q5VTH2 177 aa9.04□□□□□ -0.96
AFF3-215ENST00000498090 A0A0B4J2C4 111 aa9.04□□□□□ -0.96
AFF3-215ENST00000498090 APOMO95445 188 aa9.04□□□□□ -0.96
AFF3-215ENST00000498090 CFC1BP0CG36 223 aa9.04□□□□□ -0.96
AFF3-215ENST00000498090 CFC1P0CG37 223 aa9.04□□□□□ -0.96
AFF3-215ENST00000498090 BEAN1Q3B7T3 259 aa9.04□□□□□ -0.96
AFF3-215ENST00000498090 ETDBQ3ZM63 59 aa9.04□□□□□ -0.96
AFF3-215ENST00000498090 TMEM61Q8N0U2 210 aa9.04□□□□□ -0.96
AFF3-215ENST00000498090 MAP6D1Q9H9H5 199 aa9.04□□□□□ -0.96
AFF3-215ENST00000498090 ANK2Q01484 3957 aa9.03□□□□□ -0.96
AFF3-215ENST00000498090 LOC107984156A0A0G2JMH3 177 aa9.03□□□□□ -0.96
AFF3-215ENST00000498090 ARL17AQ8IVW1 177 aa9.03□□□□□ -0.96
AFF3-215ENST00000498090 SPATA3Q8NHX4 192 aa9.03□□□□□ -0.96
AFF3-215ENST00000498090 SPATA25Q9BR10 227 aa9.03□□□□□ -0.96
AFF3-215ENST00000498090 A0A0J9YXV3 536 aa9.02□□□□□ -0.97
AFF3-215ENST00000498090 TINCRA0A1B0GVN0 87 aa9.02□□□□□ -0.97
AFF3-215ENST00000498090 IGHV3-53P01767 116 aa9.02□□□□□ -0.97
AFF3-215ENST00000498090 DEFB114Q30KQ6 69 aa9.02□□□□□ -0.97
AFF3-215ENST00000498090 SIGMAR1Q99720 223 aa9.02□□□□□ -0.97
AFF3-215ENST00000498090 OPRPNQ99935 248 aaPredicted RBP9.02□□□□□ -0.97
AFF3-215ENST00000498090 TIMM21Q9BVV7 248 aa9.02□□□□□ -0.97
AFF3-215ENST00000498090 C1QTNF4Q9BXJ3 329 aa9.02□□□□□ -0.97
AFF3-215ENST00000498090 RBMY1BA6NDE4 496 aaKnown RBP9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms