RNA–Protein interactions for RNA: ENST00000498020.1

HLA-DMB-262, Transcript of major histocompatibility complex, class II, DM beta, humanhuman

Gene HLA-DMB, Length 4,569 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMB-262ENST00000498020 C20orf78Q9BR46 151 aa6.06□□□□□ -1.44
HLA-DMB-262ENST00000498020 NXPH4O95158 308 aa6.06□□□□□ -1.44
HLA-DMB-262ENST00000498020 IGHG4P01861 327 aa6.06□□□□□ -1.44
HLA-DMB-262ENST00000498020 C11orf45Q8TAV5 145 aa6.06□□□□□ -1.44
HLA-DMB-262ENST00000498020 BRI3O95415 125 aa6.06□□□□□ -1.44
HLA-DMB-262ENST00000498020 LINC01545Q5VT33 79 aa6.06□□□□□ -1.44
HLA-DMB-262ENST00000498020 SPART-AS1P0CW21 52 aa6.05□□□□□ -1.44
HLA-DMB-262ENST00000498020 HERVK_113P63121 156 aa6.05□□□□□ -1.44
HLA-DMB-262ENST00000498020 F6UB75 175 aa6.05□□□□□ -1.44
HLA-DMB-262ENST00000498020 KLK9Q2XQG4 91 aa6.05□□□□□ -1.44
HLA-DMB-262ENST00000498020 NSD1Q96L73 2696 aaPredicted RBP6.05□□□□□ -1.44
HLA-DMB-262ENST00000498020 PRSS29PA6NIE9 313 aa6.04□□□□□ -1.44
HLA-DMB-262ENST00000498020 MRPL35Q9NZE8 188 aaKnown RBP6.04□□□□□ -1.44
HLA-DMB-262ENST00000498020 STAB2Q8WWQ8 2551 aa6.04□□□□□ -1.44
HLA-DMB-262ENST00000498020 ZNF124Q15973 351 aa6.04□□□□□ -1.44
HLA-DMB-262ENST00000498020 TRAV26-2A0A0B4J265 109 aa6.04□□□□□ -1.44
HLA-DMB-262ENST00000498020 SPATA12Q7Z6I5 190 aa6.04□□□□□ -1.44
HLA-DMB-262ENST00000498020 TMEM61Q8N0U2 210 aa6.04□□□□□ -1.44
HLA-DMB-262ENST00000498020 U3KQK5 164 aa6.04□□□□□ -1.44
HLA-DMB-262ENST00000498020 MED14OSP0DP75 135 aa6.04□□□□□ -1.44
HLA-DMB-262ENST00000498020 UBL5Q9BZL1 73 aa6.04□□□□□ -1.44
HLA-DMB-262ENST00000498020 TENM4Q6N022 2769 aa6.03□□□□□ -1.44
HLA-DMB-262ENST00000498020 BOD1L1Q8NFC6 3051 aa6.03□□□□□ -1.44
HLA-DMB-262ENST00000498020 IGLV1-40P01703 118 aa6.03□□□□□ -1.44
HLA-DMB-262ENST00000498020 ADAMTSL5Q6ZMM2 481 aa6.03□□□□□ -1.44
HLA-DMB-262ENST00000498020 J3QQQ9 107 aa6.03□□□□□ -1.44
HLA-DMB-262ENST00000498020 K7EMI3 77 aa6.03□□□□□ -1.44
HLA-DMB-262ENST00000498020 COX8AP10176 69 aa6.03□□□□□ -1.44
HLA-DMB-262ENST00000498020 RBMY1FQ15415 496 aaKnown RBP6.03□□□□□ -1.44
HLA-DMB-262ENST00000498020 C15orf53Q8NAA6 179 aa6.03□□□□□ -1.44
HLA-DMB-262ENST00000498020 COX11Q9Y6N1 276 aa6.03□□□□□ -1.44
HLA-DMB-262ENST00000498020 ITPR2Q14571 2701 aa6.03□□□□□ -1.44
HLA-DMB-262ENST00000498020 GATA1P15976 413 aaPredicted RBP6.03□□□□□ -1.44
HLA-DMB-262ENST00000498020 URB1-AS1Q96HZ7 61 aa6.03□□□□□ -1.44
HLA-DMB-262ENST00000498020 CNFNQ9BYD5 112 aa6.03□□□□□ -1.44
HLA-DMB-262ENST00000498020 SCRT2Q9NQ03 307 aa6.03□□□□□ -1.44
HLA-DMB-262ENST00000498020 TRAV13-2A0A0B4J235 113 aa6.03□□□□□ -1.44
HLA-DMB-262ENST00000498020 Q8N976 141 aa6.03□□□□□ -1.44
HLA-DMB-262ENST00000498020 UBE2WQ96B02 151 aa6.03□□□□□ -1.44
HLA-DMB-262ENST00000498020 PRO1854Q9UHT4 67 aa6.03□□□□□ -1.44
HLA-DMB-262ENST00000498020 G3V4G9 280 aa6.02□□□□□ -1.45
HLA-DMB-262ENST00000498020 GTSF1LQ9H1H1 148 aa6.02□□□□□ -1.45
HLA-DMB-262ENST00000498020 NOP10Q9NPE3 64 aaKnown RBP6.02□□□□□ -1.45
HLA-DMB-262ENST00000498020 ZNF580Q9UK33 172 aa6.02□□□□□ -1.45
HLA-DMB-262ENST00000498020 GNRH2O43555 120 aa6.02□□□□□ -1.45
HLA-DMB-262ENST00000498020 FGF6P10767 208 aa6.02□□□□□ -1.45
HLA-DMB-262ENST00000498020 TAL2Q16559 108 aa6.02□□□□□ -1.45
HLA-DMB-262ENST00000498020 SUMO4Q6EEV6 95 aa6.02□□□□□ -1.45
HLA-DMB-262ENST00000498020 RNF152Q8N8N0 203 aa6.02□□□□□ -1.45
HLA-DMB-262ENST00000498020 C20orf173Q96LM9 149 aa6.02□□□□□ -1.45
HLA-DMB-262ENST00000498020 Q6ZS46 218 aa6.02□□□□□ -1.45
HLA-DMB-262ENST00000498020 SPANXDQ9BXN6 97 aa6.02□□□□□ -1.45
HLA-DMB-262ENST00000498020 TRAV25A0A0B4J276 109 aa6.01□□□□□ -1.45
HLA-DMB-262ENST00000498020 PSMB8P28062 276 aa6.01□□□□□ -1.45
HLA-DMB-262ENST00000498020 ZFAND2AQ8N6M9 145 aa6.01□□□□□ -1.45
HLA-DMB-262ENST00000498020 C1orf43Q9BWL3 253 aa6.01□□□□□ -1.45
HLA-DMB-262ENST00000498020 EDA2RQ9HAV5 297 aa6.01□□□□□ -1.45
HLA-DMB-262ENST00000498020 IGKV2D-24A0A075B6R9 120 aa6.01□□□□□ -1.45
HLA-DMB-262ENST00000498020 TEX48A0A1B0GUV7 120 aa6.01□□□□□ -1.45
HLA-DMB-262ENST00000498020 ZZEF1O43149 2961 aa6.01□□□□□ -1.45
HLA-DMB-262ENST00000498020 HAMPP81172 84 aa6.01□□□□□ -1.45
HLA-DMB-262ENST00000498020 SPINK8P0C7L1 97 aa6.01□□□□□ -1.45
HLA-DMB-262ENST00000498020 DEFB1P60022 68 aa6.01□□□□□ -1.45
HLA-DMB-262ENST00000498020 C4orf3Q8WVX3 66 aa6.01□□□□□ -1.45
HLA-DMB-262ENST00000498020 PPDPFLQ8WWR9 84 aa6.01□□□□□ -1.45
HLA-DMB-262ENST00000498020 RNF185Q96GF1 192 aa6.01□□□□□ -1.45
HLA-DMB-262ENST00000498020 UBE2BP63146 152 aa6□□□□□ -1.45
HLA-DMB-262ENST00000498020 ETDBQ3ZM63 59 aa6□□□□□ -1.45
HLA-DMB-262ENST00000498020 MDFIQ99750 246 aa6□□□□□ -1.45
HLA-DMB-262ENST00000498020 C11orf21Q9P2W6 132 aa6□□□□□ -1.45
HLA-DMB-262ENST00000498020 PKIGQ9Y2B9 76 aa6□□□□□ -1.45
HLA-DMB-262ENST00000498020 SPRY2O43597 315 aa6□□□□□ -1.45
HLA-DMB-262ENST00000498020 MRPL23Q16540 153 aaKnown RBP6□□□□□ -1.45
HLA-DMB-262ENST00000498020 COL12A1Q99715 3063 aa6□□□□□ -1.45
HLA-DMB-262ENST00000498020 LGALS9O00182 355 aa6□□□□□ -1.45
HLA-DMB-262ENST00000498020 ATP5G1P05496 136 aa6□□□□□ -1.45
HLA-DMB-262ENST00000498020 XCL1P47992 114 aa6□□□□□ -1.45
HLA-DMB-262ENST00000498020 SH2D6Q7Z4S9 175 aa6□□□□□ -1.45
HLA-DMB-262ENST00000498020 LOC400499M0QZD8 3231 aa6□□□□□ -1.45
HLA-DMB-262ENST00000498020 DMBT1Q9UGM3 2413 aaPredicted RBP6□□□□□ -1.45
HLA-DMB-262ENST00000498020 C9orf118A6NHY6 69 aa5.99□□□□□ -1.45
HLA-DMB-262ENST00000498020 CLPSL2Q6UWE3 100 aa5.99□□□□□ -1.45
HLA-DMB-262ENST00000498020 DSCR8Q96T75 97 aa5.99□□□□□ -1.45
HLA-DMB-262ENST00000498020 DKK2Q9UBU2 259 aa5.99□□□□□ -1.45
HLA-DMB-262ENST00000498020 ODF3Q96PU9 254 aa5.99□□□□□ -1.45
HLA-DMB-262ENST00000498020 IGHV4-4A0A075B6R2 117 aa5.99□□□□□ -1.45
HLA-DMB-262ENST00000498020 A0A0J9YX75 114 aa5.99□□□□□ -1.45
HLA-DMB-262ENST00000498020 SIVA1O15304 175 aa5.99□□□□□ -1.45
HLA-DMB-262ENST00000498020 K7EQG2 157 aa5.98□□□□□ -1.45
HLA-DMB-262ENST00000498020 RNASE13Q5GAN3 156 aaKnown RBP5.98□□□□□ -1.45
HLA-DMB-262ENST00000498020 SLC25A29Q8N8R3 303 aa5.98□□□□□ -1.45
HLA-DMB-262ENST00000498020 DEFB131BA0A096LNP1 70 aa5.98□□□□□ -1.45
HLA-DMB-262ENST00000498020 BVES-AS1Q5T3Y7 98 aa5.98□□□□□ -1.45
HLA-DMB-262ENST00000498020 C18orf65Q6ZTR6 163 aa5.98□□□□□ -1.45
HLA-DMB-262ENST00000498020 BOD1L2Q8IYS8 172 aa5.98□□□□□ -1.45
HLA-DMB-262ENST00000498020 C16orf74Q96GX8 76 aa5.98□□□□□ -1.45
HLA-DMB-262ENST00000498020 ATMQ13315 3056 aa5.98□□□□□ -1.45
HLA-DMB-262ENST00000498020 ATP6V0E2Q8NHE4 81 aa5.98□□□□□ -1.45
HLA-DMB-262ENST00000498020 CFAP47Q6ZTR5 3102 aa5.98□□□□□ -1.45
HLA-DMB-262ENST00000498020 F8W1H4 67 aa5.98□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms