RNA–Protein interactions for RNA: ENST00000497984.5

SMC4-227, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-227ENST00000497984 OR8I2Q8N0Y5 310 aa-0.46□□□□□ -2.48
SMC4-227ENST00000497984 MT1MQ8N339 61 aa-0.46□□□□□ -2.48
SMC4-227ENST00000497984 DYNLRB2Q8TF09 96 aa-0.46□□□□□ -2.48
SMC4-227ENST00000497984 Q96NJ1 140 aa-0.46□□□□□ -2.48
SMC4-227ENST00000497984 ASPMQ8IZT6 3477 aa-0.46□□□□□ -2.48
SMC4-227ENST00000497984 ESPL1Q14674 2120 aa-0.47□□□□□ -2.48
SMC4-227ENST00000497984 AFDNP55196 1824 aaKnown RBP-0.47□□□□□ -2.48
SMC4-227ENST00000497984 NUP210Q8TEM1 1887 aaPredicted RBP-0.47□□□□□ -2.48
SMC4-227ENST00000497984 TRPM7Q96QT4 1865 aa-0.47□□□□□ -2.48
SMC4-227ENST00000497984 DNAJC13O75165 2243 aa-0.47□□□□□ -2.48
SMC4-227ENST00000497984 J3KT08 172 aa-0.47□□□□□ -2.48
SMC4-227ENST00000497984 MT2AP02795 61 aa-0.47□□□□□ -2.48
SMC4-227ENST00000497984 SMR3BP02814 79 aaPredicted RBP-0.47□□□□□ -2.48
SMC4-227ENST00000497984 MT1AP04731 61 aa-0.47□□□□□ -2.48
SMC4-227ENST00000497984 APODP05090 189 aa-0.47□□□□□ -2.48
SMC4-227ENST00000497984 HLA-DRB4P13762 266 aa-0.47□□□□□ -2.48
SMC4-227ENST00000497984 S100GP29377 79 aa-0.47□□□□□ -2.48
SMC4-227ENST00000497984 RPS28P62857 69 aaKnown RBP-0.47□□□□□ -2.48
SMC4-227ENST00000497984 OR8B8Q15620 311 aa-0.47□□□□□ -2.48
SMC4-227ENST00000497984 TMEM244Q5VVB8 128 aa-0.47□□□□□ -2.48
SMC4-227ENST00000497984 CYP2G1PQ6ZSU1 146 aa-0.47□□□□□ -2.48
SMC4-227ENST00000497984 BANF2Q9H503 90 aa-0.47□□□□□ -2.48
SMC4-227ENST00000497984 CALML5Q9NZT1 146 aa-0.47□□□□□ -2.48
SMC4-227ENST00000497984 NOP16Q9Y3C1 178 aaKnown RBP-0.47□□□□□ -2.48
SMC4-227ENST00000497984 HLA-DRB4X5D2U9 266 aa-0.47□□□□□ -2.48
SMC4-227ENST00000497984 MYH2Q9UKX2 1941 aa-0.47□□□□□ -2.48
SMC4-227ENST00000497984 SYNJ1O43426 1573 aa-0.48□□□□□ -2.49
SMC4-227ENST00000497984 MT1GP13640 62 aa-0.48□□□□□ -2.49
SMC4-227ENST00000497984 MT1XP80297 61 aa-0.48□□□□□ -2.49
SMC4-227ENST00000497984 NDUFA11Q86Y39 141 aa-0.48□□□□□ -2.49
SMC4-227ENST00000497984 C4orf33Q8N1A6 199 aa-0.48□□□□□ -2.49
SMC4-227ENST00000497984 ATP6V0E2Q8NHE4 81 aa-0.48□□□□□ -2.49
SMC4-227ENST00000497984 DDA1Q9BW61 102 aa-0.48□□□□□ -2.49
SMC4-227ENST00000497984 TMEM242Q9NWH2 141 aa-0.48□□□□□ -2.49
SMC4-227ENST00000497984 V9GYQ6 96 aa-0.48□□□□□ -2.49
SMC4-227ENST00000497984 TNS1Q9HBL0 1735 aaKnown RBP-0.48□□□□□ -2.49
SMC4-227ENST00000497984 SMARCA2P51531 1590 aa-0.49□□□□□ -2.49
SMC4-227ENST00000497984 TRAV36DV7A0A075B6V5 113 aa-0.49□□□□□ -2.49
SMC4-227ENST00000497984 TRBV7-1A0A0A6YYK4 115 aa-0.49□□□□□ -2.49
SMC4-227ENST00000497984 MT1HP80294 61 aa-0.49□□□□□ -2.49
SMC4-227ENST00000497984 DEFA5Q01523 94 aa-0.49□□□□□ -2.49
SMC4-227ENST00000497984 SSBP1Q04837 148 aaKnown RBP-0.49□□□□□ -2.49
SMC4-227ENST00000497984 CLLU1Q5K131 121 aa-0.49□□□□□ -2.49
SMC4-227ENST00000497984 Q6ZRX8 168 aa-0.49□□□□□ -2.49
SMC4-227ENST00000497984 C20orf197Q8N268 126 aa-0.49□□□□□ -2.49
SMC4-227ENST00000497984 COX7B2Q8TF08 81 aa-0.49□□□□□ -2.49
SMC4-227ENST00000497984 ASXL1Q8IXJ9 1541 aa-0.49□□□□□ -2.49
SMC4-227ENST00000497984 PKDREJQ9NTG1 2253 aa-0.5□□□□□ -2.49
SMC4-227ENST00000497984 SMIM24O75264 130 aa-0.5□□□□□ -2.49
SMC4-227ENST00000497984 TNFSF15O95150 251 aa-0.5□□□□□ -2.49
SMC4-227ENST00000497984 ACYP2P14621 99 aa-0.5□□□□□ -2.49
SMC4-227ENST00000497984 SKA2Q8WVK7 121 aaPredicted RBP-0.5□□□□□ -2.49
SMC4-227ENST00000497984 ERG28Q9UKR5 140 aa-0.5□□□□□ -2.49
SMC4-227ENST00000497984 SMG6Q86US8 1419 aaKnown RBP-0.5□□□□□ -2.49
SMC4-227ENST00000497984 KDM5CP41229 1560 aa-0.5□□□□□ -2.49
SMC4-227ENST00000497984 PPRC1Q5VV67 1664 aaKnown RBP-0.5□□□□□ -2.49
SMC4-227ENST00000497984 ATG2AQ2TAZ0 1938 aa-0.5□□□□□ -2.49
SMC4-227ENST00000497984 ASXL3Q9C0F0 2248 aa-0.5□□□□□ -2.49
SMC4-227ENST00000497984 A0A1B0GX51 115 aa-0.51□□□□□ -2.49
SMC4-227ENST00000497984 UHRF1BP1LA0JNW5 1464 aa-0.51□□□□□ -2.49
SMC4-227ENST00000497984 CFDP00746 253 aaPredicted RBP-0.51□□□□□ -2.49
SMC4-227ENST00000497984 RBP4P02753 201 aa-0.51□□□□□ -2.49
SMC4-227ENST00000497984 MT1EP04732 61 aa-0.51□□□□□ -2.49
SMC4-227ENST00000497984 MAP2P11137 1827 aaKnown RBP-0.51□□□□□ -2.49
SMC4-227ENST00000497984 FER1L6Q2WGJ9 1857 aa-0.51□□□□□ -2.49
SMC4-227ENST00000497984 KLK9Q2XQG4 91 aa-0.51□□□□□ -2.49
SMC4-227ENST00000497984 SLC48A1Q6P1K1 146 aa-0.51□□□□□ -2.49
SMC4-227ENST00000497984 SPAG17Q6Q759 2223 aa-0.51□□□□□ -2.49
SMC4-227ENST00000497984 ATP11AUNQ6ZP68 121 aa-0.51□□□□□ -2.49
SMC4-227ENST00000497984 HIGD1AQ9Y241 93 aa-0.51□□□□□ -2.49
SMC4-227ENST00000497984 LSM2Q9Y333 95 aaKnown RBP-0.51□□□□□ -2.49
SMC4-227ENST00000497984 KNL1Q8NG31 2342 aa-0.52□□□□□ -2.49
SMC4-227ENST00000497984 TANC2Q9HCD6 1990 aa-0.52□□□□□ -2.49
SMC4-227ENST00000497984 MYH3P11055 1940 aa-0.52□□□□□ -2.49
SMC4-227ENST00000497984 VIRMAQ69YN4 1812 aaKnown RBP-0.52□□□□□ -2.49
SMC4-227ENST00000497984 PBRM1Q86U86 1689 aa-0.52□□□□□ -2.49
SMC4-227ENST00000497984 ZNF609O15014 1411 aa-0.52□□□□□ -2.49
SMC4-227ENST00000497984 TRGV1A0A0A0MS02 117 aa-0.52□□□□□ -2.49
SMC4-227ENST00000497984 TRAV12-3A0A0B4J271 114 aa-0.52□□□□□ -2.49
SMC4-227ENST00000497984 TMEM14DPA8MWL7 114 aa-0.52□□□□□ -2.49
SMC4-227ENST00000497984 J3QLW9 94 aa-0.52□□□□□ -2.49
SMC4-227ENST00000497984 SCTP09683 121 aa-0.52□□□□□ -2.49
SMC4-227ENST00000497984 FAM74A4Q5TZK3 123 aa-0.52□□□□□ -2.49
SMC4-227ENST00000497984 GINS2Q9Y248 185 aa-0.52□□□□□ -2.49
SMC4-227ENST00000497984 V9GYV3 84 aa-0.52□□□□□ -2.49
SMC4-227ENST00000497984 KIAA0100Q14667 2235 aaKnown RBP-0.52□□□□□ -2.49
SMC4-227ENST00000497984 LAMB1P07942 1786 aa-0.52□□□□□ -2.49
SMC4-227ENST00000497984 BORCS7-ASMTA0A0B4J1R7 106 aa-0.53□□□□□ -2.49
SMC4-227ENST00000497984 ZNF815PA8K554 130 aa-0.53□□□□□ -2.49
SMC4-227ENST00000497984 TSTD3H0UI37 97 aa-0.53□□□□□ -2.49
SMC4-227ENST00000497984 H0YAA0 97 aa-0.53□□□□□ -2.49
SMC4-227ENST00000497984 CCDC179H3BU77 68 aa-0.53□□□□□ -2.49
SMC4-227ENST00000497984 M0R2P5 195 aa-0.53□□□□□ -2.49
SMC4-227ENST00000497984 DEGS1O15121 323 aa-0.53□□□□□ -2.49
SMC4-227ENST00000497984 GCHFRP30047 84 aa-0.53□□□□□ -2.49
SMC4-227ENST00000497984 CMPK1P30085 196 aa-0.53□□□□□ -2.49
SMC4-227ENST00000497984 INSL4Q14641 139 aa-0.53□□□□□ -2.49
SMC4-227ENST00000497984 KRTAP19-2Q3LHN2 52 aa-0.53□□□□□ -2.49
SMC4-227ENST00000497984 SSBP3-AS1Q7Z2R9 100 aa-0.53□□□□□ -2.49
SMC4-227ENST00000497984 SMIM15Q7Z3B0 74 aa-0.53□□□□□ -2.49
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms