RNA–Protein interactions for RNA: ENST00000497978.1

NUDCD3-211, Transcript of NudC domain containing 3, humanhuman

TSL 4

Gene NUDCD3, Length 659 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-211ENST00000497978 IGLV10-54A0A075B6I4 117 aa7.6□□□□□ -1.19
NUDCD3-211ENST00000497978 A0A1B0GUV1 79 aa7.6□□□□□ -1.19
NUDCD3-211ENST00000497978 UBE2L6O14933 153 aa7.6□□□□□ -1.19
NUDCD3-211ENST00000497978 BCL2P10415 239 aa7.6□□□□□ -1.19
NUDCD3-211ENST00000497978 NTF3P20783 257 aa7.6□□□□□ -1.19
NUDCD3-211ENST00000497978 TAGLN2P37802 199 aaKnown RBP7.6□□□□□ -1.19
NUDCD3-211ENST00000497978 WDR73Q6P4I2 378 aa7.6□□□□□ -1.19
NUDCD3-211ENST00000497978 PGLYRP4Q96LB8 373 aa7.6□□□□□ -1.19
NUDCD3-211ENST00000497978 OXTP01178 125 aa7.59□□□□□ -1.19
NUDCD3-211ENST00000497978 KRTAP10-4P60372 401 aaPredicted RBP7.59□□□□□ -1.19
NUDCD3-211ENST00000497978 RPL37AP61513 92 aaKnown RBP7.59□□□□□ -1.19
NUDCD3-211ENST00000497978 TWIST1Q15672 202 aa7.59□□□□□ -1.19
NUDCD3-211ENST00000497978 KRTAP26-1Q6PEX3 210 aa7.59□□□□□ -1.19
NUDCD3-211ENST00000497978 C9orf62Q8N4C0 152 aa7.59□□□□□ -1.19
NUDCD3-211ENST00000497978 C20orf203Q8NBC4 194 aa7.59□□□□□ -1.19
NUDCD3-211ENST00000497978 TRBV20OR9-2A0A075B6H5 130 aa7.58□□□□□ -1.2
NUDCD3-211ENST00000497978 hDV102S1A0JD36 115 aa7.58□□□□□ -1.2
NUDCD3-211ENST00000497978 ZNF561-AS1K7EIQ3 104 aa7.58□□□□□ -1.2
NUDCD3-211ENST00000497978 CTRLP40313 264 aa7.58□□□□□ -1.2
NUDCD3-211ENST00000497978 AMTP48728 403 aa7.58□□□□□ -1.2
NUDCD3-211ENST00000497978 COTL1Q14019 142 aa7.58□□□□□ -1.2
NUDCD3-211ENST00000497978 SLC51BQ86UW2 128 aa7.58□□□□□ -1.2
NUDCD3-211ENST00000497978 NUDT10Q8NFP7 164 aa7.58□□□□□ -1.2
NUDCD3-211ENST00000497978 NUDT11Q96G61 164 aa7.58□□□□□ -1.2
NUDCD3-211ENST00000497978 DNAH8Q96JB1 4490 aa7.58□□□□□ -1.2
NUDCD3-211ENST00000497978 IGLV4-60A0A075B6I1 120 aa7.57□□□□□ -1.2
NUDCD3-211ENST00000497978 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.57□□□□□ -1.2
NUDCD3-211ENST00000497978 SMIM15Q7Z3B0 74 aa7.57□□□□□ -1.2
NUDCD3-211ENST00000497978 TCTE3Q8IZS6 198 aa7.57□□□□□ -1.2
NUDCD3-211ENST00000497978 RPP21Q9H633 154 aaKnown RBP7.57□□□□□ -1.2
NUDCD3-211ENST00000497978 CNBPP62633 177 aaKnown RBP7.56□□□□□ -1.2
NUDCD3-211ENST00000497978 SERTAD4-AS1Q5TG53 156 aa7.56□□□□□ -1.2
NUDCD3-211ENST00000497978 SDIM1Q6ZPB5 146 aa7.56□□□□□ -1.2
NUDCD3-211ENST00000497978 DPH3Q96FX2 82 aa7.56□□□□□ -1.2
NUDCD3-211ENST00000497978 CNFNQ9BYD5 112 aa7.56□□□□□ -1.2
NUDCD3-211ENST00000497978 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.56□□□□□ -1.2
NUDCD3-211ENST00000497978 IGHV3-64A0A075B6Q5 118 aa7.55□□□□□ -1.2
NUDCD3-211ENST00000497978 OCC1Q8TAD7 63 aa7.55□□□□□ -1.2
NUDCD3-211ENST00000497978 GFRA4Q9GZZ7 299 aa7.55□□□□□ -1.2
NUDCD3-211ENST00000497978 RNASE7Q9H1E1 156 aaKnown RBP7.55□□□□□ -1.2
NUDCD3-211ENST00000497978 AMMECR1LQ6DCA0 310 aa7.54□□□□□ -1.2
NUDCD3-211ENST00000497978 CFAP161Q6P656 301 aa7.54□□□□□ -1.2
NUDCD3-211ENST00000497978 TEX261Q6UWH6 196 aa7.54□□□□□ -1.2
NUDCD3-211ENST00000497978 GATD1Q8NB37 220 aa7.54□□□□□ -1.2
NUDCD3-211ENST00000497978 TRAV26-2A0A0B4J265 109 aa7.53□□□□□ -1.2
NUDCD3-211ENST00000497978 IGKV3OR2-268A0A0C4DH90 116 aa7.53□□□□□ -1.2
NUDCD3-211ENST00000497978 K7EN84 100 aa7.53□□□□□ -1.2
NUDCD3-211ENST00000497978 NCR2O95944 276 aa7.53□□□□□ -1.2
NUDCD3-211ENST00000497978 SRSF3P84103 164 aaKnown RBP7.53□□□□□ -1.2
NUDCD3-211ENST00000497978 GAGE12HA6NDE8 117 aa7.52□□□□□ -1.21
NUDCD3-211ENST00000497978 H7C423 109 aa7.52□□□□□ -1.21
NUDCD3-211ENST00000497978 PANO1I0J062 215 aa7.52□□□□□ -1.21
NUDCD3-211ENST00000497978 GATCO43716 136 aaKnown RBP7.52□□□□□ -1.21
NUDCD3-211ENST00000497978 BLOC1S1P78537 153 aa7.52□□□□□ -1.21
NUDCD3-211ENST00000497978 RNASEKQ6P5S7 137 aaKnown RBP7.52□□□□□ -1.21
NUDCD3-211ENST00000497978 RNF185Q96GF1 192 aa7.52□□□□□ -1.21
NUDCD3-211ENST00000497978 A8MWL6 223 aa7.51□□□□□ -1.21
NUDCD3-211ENST00000497978 TMEM250H0YL14 139 aa7.51□□□□□ -1.21
NUDCD3-211ENST00000497978 APCSP02743 223 aa7.51□□□□□ -1.21
NUDCD3-211ENST00000497978 CIRBPQ14011 172 aaKnown RBP7.51□□□□□ -1.21
NUDCD3-211ENST00000497978 GTSF1Q8WW33 167 aa7.51□□□□□ -1.21
NUDCD3-211ENST00000497978 BORCS7Q96B45 105 aa7.51□□□□□ -1.21
NUDCD3-211ENST00000497978 RPL39LQ96EH5 51 aaKnown RBP7.51□□□□□ -1.21
NUDCD3-211ENST00000497978 PLA2G2DQ9UNK4 145 aa7.51□□□□□ -1.21
NUDCD3-211ENST00000497978 SDHAF1A6NFY7 115 aa7.5□□□□□ -1.21
NUDCD3-211ENST00000497978 SLPIP03973 132 aa7.5□□□□□ -1.21
NUDCD3-211ENST00000497978 Q6ZNX1 250 aa7.5□□□□□ -1.21
NUDCD3-211ENST00000497978 FAM231DQ6ZW35 169 aa7.5□□□□□ -1.21
NUDCD3-211ENST00000497978 CHCHD10Q8WYQ3 142 aaPredicted RBP7.5□□□□□ -1.21
NUDCD3-211ENST00000497978 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.49□□□□□ -1.21
NUDCD3-211ENST00000497978 A0A087WYN8 130 aa7.49□□□□□ -1.21
NUDCD3-211ENST00000497978 IGKV2-29A2NJV5 120 aaPredicted RBP7.49□□□□□ -1.21
NUDCD3-211ENST00000497978 I3L3M4 83 aa7.49□□□□□ -1.21
NUDCD3-211ENST00000497978 FGF6P10767 208 aa7.49□□□□□ -1.21
NUDCD3-211ENST00000497978 ZNF25P17030 456 aaPredicted RBP7.49□□□□□ -1.21
NUDCD3-211ENST00000497978 PMCHP20382 165 aa7.49□□□□□ -1.21
NUDCD3-211ENST00000497978 RPS10P46783 165 aaKnown RBP7.49□□□□□ -1.21
NUDCD3-211ENST00000497978 HNRNPA3P51991 378 aaKnown RBP7.49□□□□□ -1.21
NUDCD3-211ENST00000497978 CEBPGP53567 150 aa7.49□□□□□ -1.21
NUDCD3-211ENST00000497978 FOXA3P55318 350 aaPredicted RBP7.49□□□□□ -1.21
NUDCD3-211ENST00000497978 ALKAL2Q6UX46 152 aa7.49□□□□□ -1.21
NUDCD3-211ENST00000497978 AKAP14Q86UN6 197 aa7.49□□□□□ -1.21
NUDCD3-211ENST00000497978 C15orf56Q8N910 161 aa7.49□□□□□ -1.21
NUDCD3-211ENST00000497978 SPACA4Q8TDM5 124 aa7.49□□□□□ -1.21
NUDCD3-211ENST00000497978 TMEM101Q96IK0 257 aa7.49□□□□□ -1.21
NUDCD3-211ENST00000497978 BTF3L4Q96K17 158 aa7.49□□□□□ -1.21
NUDCD3-211ENST00000497978 hCG_2014768A0A024R1R8 64 aa7.48□□□□□ -1.21
NUDCD3-211ENST00000497978 CHTF8P0CG12 524 aa7.48□□□□□ -1.21
NUDCD3-211ENST00000497978 HIGD2BQ4VC39 106 aa7.48□□□□□ -1.21
NUDCD3-211ENST00000497978 CT83Q5H943 113 aa7.48□□□□□ -1.21
NUDCD3-211ENST00000497978 XP32Q5T750 250 aa7.48□□□□□ -1.21
NUDCD3-211ENST00000497978 Q6ZRU5 148 aa7.48□□□□□ -1.21
NUDCD3-211ENST00000497978 FAM210AQ96ND0 272 aa7.48□□□□□ -1.21
NUDCD3-211ENST00000497978 TRBV6-5A0A0K0K1A5 114 aa7.47□□□□□ -1.21
NUDCD3-211ENST00000497978 NDUFS6O75380 124 aaKnown RBP7.47□□□□□ -1.21
NUDCD3-211ENST00000497978 COX6A2Q02221 97 aa7.47□□□□□ -1.21
NUDCD3-211ENST00000497978 OR5A1Q8NGJ0 315 aa7.47□□□□□ -1.21
NUDCD3-211ENST00000497978 C7orf33Q8WU49 177 aa7.47□□□□□ -1.21
NUDCD3-211ENST00000497978 ST20Q9HBF5 79 aa7.47□□□□□ -1.21
NUDCD3-211ENST00000497978 GVQW2A0A096LPI5 108 aaPredicted RBP7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms