RNA–Protein interactions for RNA: ENST00000497722.2

PSPC1-205, Transcript of paraspeckle component 1, humanhuman

TSL 2

Gene PSPC1, Length 448 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-205ENST00000497722 LINC00470Q9BZP3 86 aa-0.02□□□□□ -2.41
PSPC1-205ENST00000497722 AGPAT4-IT1Q9H0P7 198 aa-0.02□□□□□ -2.41
PSPC1-205ENST00000497722 RERGLQ9H628 205 aa-0.02□□□□□ -2.41
PSPC1-205ENST00000497722 ARAP2Q8WZ64 1704 aa-0.02□□□□□ -2.41
PSPC1-205ENST00000497722 LAMC1P11047 1609 aa-0.02□□□□□ -2.41
PSPC1-205ENST00000497722 UNC79Q9P2D8 2635 aa-0.02□□□□□ -2.41
PSPC1-205ENST00000497722 MRC1P22897 1456 aa-0.03□□□□□ -2.41
PSPC1-205ENST00000497722 ZNF609O15014 1411 aa-0.03□□□□□ -2.41
PSPC1-205ENST00000497722 LRRC37A2A6NM11 1700 aa-0.03□□□□□ -2.41
PSPC1-205ENST00000497722 CFDP00746 253 aaPredicted RBP-0.03□□□□□ -2.41
PSPC1-205ENST00000497722 HMGN1P05114 100 aa-0.03□□□□□ -2.41
PSPC1-205ENST00000497722 UBE2DNLQ8IWF7 75 aa-0.03□□□□□ -2.41
PSPC1-205ENST00000497722 COPS9Q8WXC6 57 aa-0.03□□□□□ -2.41
PSPC1-205ENST00000497722 LSM10Q969L4 123 aaKnown RBP-0.03□□□□□ -2.41
PSPC1-205ENST00000497722 PDCD10Q9BUL8 212 aa-0.03□□□□□ -2.41
PSPC1-205ENST00000497722 SEC11CQ9BY50 192 aa-0.03□□□□□ -2.41
PSPC1-205ENST00000497722 CYP4F30PQ9H0H9 118 aa-0.03□□□□□ -2.41
PSPC1-205ENST00000497722 SERP1Q9Y6X1 66 aa-0.03□□□□□ -2.41
PSPC1-205ENST00000497722 HUWE1Q7Z6Z7 4374 aaKnown RBP-0.03□□□□□ -2.41
PSPC1-205ENST00000497722 MYCBP2O75592 4640 aa-0.03□□□□□ -2.41
PSPC1-205ENST00000497722 CACNA1CQ13936 2221 aa-0.03□□□□□ -2.41
PSPC1-205ENST00000497722 NCOR1O75376 2440 aa-0.04□□□□□ -2.42
PSPC1-205ENST00000497722 FAM208BQ5VWN6 2430 aa-0.04□□□□□ -2.42
PSPC1-205ENST00000497722 TRAV13-2A0A0B4J235 113 aa-0.04□□□□□ -2.42
PSPC1-205ENST00000497722 ZNF815PA8K554 130 aa-0.04□□□□□ -2.42
PSPC1-205ENST00000497722 HCG22E2RYF7 251 aa-0.04□□□□□ -2.42
PSPC1-205ENST00000497722 HIST1H1DP16402 221 aaKnown RBP-0.04□□□□□ -2.42
PSPC1-205ENST00000497722 CCDC58Q4VC31 144 aa-0.04□□□□□ -2.42
PSPC1-205ENST00000497722 SSBP3-AS1Q7Z2R9 100 aa-0.04□□□□□ -2.42
PSPC1-205ENST00000497722 CNFNQ9BYD5 112 aa-0.04□□□□□ -2.42
PSPC1-205ENST00000497722 HMCN2Q8NDA2 5059 aa-0.04□□□□□ -2.42
PSPC1-205ENST00000497722 PTPN13Q12923 2485 aa-0.04□□□□□ -2.42
PSPC1-205ENST00000497722 ABCA2Q9BZC7 2435 aa-0.04□□□□□ -2.42
PSPC1-205ENST00000497722 NALCNQ8IZF0 1738 aa-0.04□□□□□ -2.42
PSPC1-205ENST00000497722 KMT2AQ03164 3969 aa-0.04□□□□□ -2.42
PSPC1-205ENST00000497722 RIMS1Q86UR5 1692 aaKnown RBP-0.05□□□□□ -2.42
PSPC1-205ENST00000497722 NHSL1Q5SYE7 1610 aa-0.05□□□□□ -2.42
PSPC1-205ENST00000497722 SPINK8P0C7L1 97 aa-0.05□□□□□ -2.42
PSPC1-205ENST00000497722 KRTAP6-1Q3LI64 71 aa-0.05□□□□□ -2.42
PSPC1-205ENST00000497722 C1orf54Q8WWF1 131 aa-0.05□□□□□ -2.42
PSPC1-205ENST00000497722 LENEPQ9Y5L5 61 aa-0.05□□□□□ -2.42
PSPC1-205ENST00000497722 CUL7Q14999 1698 aa-0.05□□□□□ -2.42
PSPC1-205ENST00000497722 KIF21AQ7Z4S6 1674 aa-0.05□□□□□ -2.42
PSPC1-205ENST00000497722 PPIP5K1Q6PFW1 1433 aa-0.05□□□□□ -2.42
PSPC1-205ENST00000497722 LRP6O75581 1613 aa-0.05□□□□□ -2.42
PSPC1-205ENST00000497722 ZNF236Q9UL36 1845 aa-0.06□□□□□ -2.42
PSPC1-205ENST00000497722 AHCTF1Q8WYP5 2266 aa-0.06□□□□□ -2.42
PSPC1-205ENST00000497722 FLNAP21333 2647 aaKnown RBP-0.06□□□□□ -2.42
PSPC1-205ENST00000497722 TENM4Q6N022 2769 aa-0.06□□□□□ -2.42
PSPC1-205ENST00000497722 PIGBOS1A0A0B4J2F0 54 aa-0.06□□□□□ -2.42
PSPC1-205ENST00000497722 GNG7O60262 68 aa-0.06□□□□□ -2.42
PSPC1-205ENST00000497722 SMIM6P0DI80 62 aa-0.06□□□□□ -2.42
PSPC1-205ENST00000497722 CFAP126Q5VTH2 177 aa-0.06□□□□□ -2.42
PSPC1-205ENST00000497722 AMELXQ99217 191 aa-0.06□□□□□ -2.42
PSPC1-205ENST00000497722 NAA60Q9H7X0 242 aa-0.06□□□□□ -2.42
PSPC1-205ENST00000497722 A2ML1A8K2U0 1454 aa-0.06□□□□□ -2.42
PSPC1-205ENST00000497722 CACNA1AO00555 2505 aa-0.06□□□□□ -2.42
PSPC1-205ENST00000497722 MYOM1P52179 1685 aa-0.06□□□□□ -2.42
PSPC1-205ENST00000497722 ROBO1Q9Y6N7 1651 aa-0.06□□□□□ -2.42
PSPC1-205ENST00000497722 SBF2Q86WG5 1849 aa-0.06□□□□□ -2.42
PSPC1-205ENST00000497722 HECTD4Q9Y4D8 3996 aa-0.07□□□□□ -2.42
PSPC1-205ENST00000497722 CELSR1Q9NYQ6 3014 aa-0.07□□□□□ -2.42
PSPC1-205ENST00000497722 A0A0D9SFI3 127 aa-0.07□□□□□ -2.42
PSPC1-205ENST00000497722 C10orf142B7Z368 130 aa-0.07□□□□□ -2.42
PSPC1-205ENST00000497722 PPP1R17O96001 155 aa-0.07□□□□□ -2.42
PSPC1-205ENST00000497722 FGF7P21781 194 aa-0.07□□□□□ -2.42
PSPC1-205ENST00000497722 RBM3P98179 157 aaKnown RBP-0.07□□□□□ -2.42
PSPC1-205ENST00000497722 MEIG1Q5JSS6 88 aa-0.07□□□□□ -2.42
PSPC1-205ENST00000497722 ZNF436-AS1Q8NC38 126 aaPredicted RBP-0.07□□□□□ -2.42
PSPC1-205ENST00000497722 AQP10Q96PS8 301 aa-0.07□□□□□ -2.42
PSPC1-205ENST00000497722 R4GMQ9 66 aa-0.07□□□□□ -2.42
PSPC1-205ENST00000497722 CPSF1Q10570 1443 aaKnown RBP-0.07□□□□□ -2.42
PSPC1-205ENST00000497722 NAIPQ13075 1403 aa-0.07□□□□□ -2.42
PSPC1-205ENST00000497722 CSMD3Q7Z407 3707 aa-0.07□□□□□ -2.42
PSPC1-205ENST00000497722 PI4KAP42356 2102 aa-0.07□□□□□ -2.42
PSPC1-205ENST00000497722 NEBP20929 6669 aa-0.07□□□□□ -2.42
PSPC1-205ENST00000497722 LPAP08519 4548 aa-0.07□□□□□ -2.42
PSPC1-205ENST00000497722 CHD9Q3L8U1 2897 aa-0.08□□□□□ -2.42
PSPC1-205ENST00000497722 STAB1Q9NY15 2570 aa-0.08□□□□□ -2.42
PSPC1-205ENST00000497722 M0R135 149 aa-0.08□□□□□ -2.42
PSPC1-205ENST00000497722 C10orf128Q5T292 105 aa-0.08□□□□□ -2.42
PSPC1-205ENST00000497722 TSC22D3Q99576 134 aa-0.08□□□□□ -2.42
PSPC1-205ENST00000497722 FAM107BQ9H098 131 aa-0.08□□□□□ -2.42
PSPC1-205ENST00000497722 PRO0255Q9UI72 69 aa-0.08□□□□□ -2.42
PSPC1-205ENST00000497722 WNK2Q9Y3S1 2297 aa-0.08□□□□□ -2.42
PSPC1-205ENST00000497722 ARHGEF5Q12774 1597 aa-0.09□□□□□ -2.42
PSPC1-205ENST00000497722 LOC100130705A0A1B0GUX0 176 aa-0.09□□□□□ -2.42
PSPC1-205ENST00000497722 FAM25AB3EWG3 89 aa-0.09□□□□□ -2.42
PSPC1-205ENST00000497722 FAM25CB3EWG5 89 aa-0.09□□□□□ -2.42
PSPC1-205ENST00000497722 FAM25GB3EWG6 89 aa-0.09□□□□□ -2.42
PSPC1-205ENST00000497722 Q56UQ5 140 aa-0.09□□□□□ -2.42
PSPC1-205ENST00000497722 TTC9CQ8N5M4 171 aa-0.09□□□□□ -2.42
PSPC1-205ENST00000497722 SMIM4Q8WVI0 70 aa-0.09□□□□□ -2.42
PSPC1-205ENST00000497722 NDUFA4L2Q9NRX3 87 aa-0.09□□□□□ -2.42
PSPC1-205ENST00000497722 SCN3BQ9NY72 215 aa-0.09□□□□□ -2.42
PSPC1-205ENST00000497722 PSME4Q14997 1843 aa-0.09□□□□□ -2.42
PSPC1-205ENST00000497722 PPRC1Q5VV67 1664 aaKnown RBP-0.09□□□□□ -2.42
PSPC1-205ENST00000497722 RAPGEF6Q8TEU7 1601 aa-0.09□□□□□ -2.42
PSPC1-205ENST00000497722 ZANQ9Y493 2812 aa-0.09□□□□□ -2.42
PSPC1-205ENST00000497722 SPTBN2O15020 2390 aa-0.1□□□□□ -2.42
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms