RNA–Protein interactions for RNA: ENST00000497121.1

CPS1-208, Transcript of carbamoyl-phosphate synthase 1, humanhuman

TSL 4

Gene CPS1, Length 585 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1-208ENST00000497121 TRGC1P0CF51 173 aa4.78□□□□□ -1.64
CPS1-208ENST00000497121 FOXA3P55318 350 aaPredicted RBP4.78□□□□□ -1.64
CPS1-208ENST00000497121 PKIAP61925 76 aa4.78□□□□□ -1.64
CPS1-208ENST00000497121 BLOC1S1P78537 153 aa4.78□□□□□ -1.64
CPS1-208ENST00000497121 MIAQ16674 131 aa4.78□□□□□ -1.64
CPS1-208ENST00000497121 KCNIP4Q6PIL6 250 aa4.78□□□□□ -1.64
CPS1-208ENST00000497121 SCXQ7RTU7 201 aa4.78□□□□□ -1.64
CPS1-208ENST00000497121 COMMD7Q86VX2 200 aa4.78□□□□□ -1.64
CPS1-208ENST00000497121 LINC00269Q8N2A0 174 aa4.78□□□□□ -1.64
CPS1-208ENST00000497121 GATD1Q8NB37 220 aa4.78□□□□□ -1.64
CPS1-208ENST00000497121 C1orf43Q9BWL3 253 aa4.78□□□□□ -1.64
CPS1-208ENST00000497121 GFRA4Q9GZZ7 299 aa4.78□□□□□ -1.64
CPS1-208ENST00000497121 DPH3P1Q9H4G8 78 aa4.78□□□□□ -1.64
CPS1-208ENST00000497121 RPP21Q9H633 154 aaKnown RBP4.78□□□□□ -1.64
CPS1-208ENST00000497121 NIT2Q9NQR4 276 aa4.78□□□□□ -1.64
CPS1-208ENST00000497121 IGLV4-60A0A075B6I1 120 aa4.77□□□□□ -1.65
CPS1-208ENST00000497121 A0A1B0GUV1 79 aa4.77□□□□□ -1.65
CPS1-208ENST00000497121 USP17L23D6RBM5 183 aa4.77□□□□□ -1.65
CPS1-208ENST00000497121 H7C1H1 209 aa4.77□□□□□ -1.65
CPS1-208ENST00000497121 PRSS1P07477 247 aa4.77□□□□□ -1.65
CPS1-208ENST00000497121 UQCC3Q6UW78 93 aa4.77□□□□□ -1.65
CPS1-208ENST00000497121 FAM231DQ6ZW35 169 aa4.77□□□□□ -1.65
CPS1-208ENST00000497121 SREK1IP1Q8N9Q2 155 aaPredicted RBP4.77□□□□□ -1.65
CPS1-208ENST00000497121 DEFB104AQ8WTQ1 72 aa4.77□□□□□ -1.65
CPS1-208ENST00000497121 PGLYRP4Q96LB8 373 aa4.77□□□□□ -1.65
CPS1-208ENST00000497121 CHAC1Q9BUX1 264 aa4.77□□□□□ -1.65
CPS1-208ENST00000497121 TRAV26-2A0A0B4J265 109 aa4.76□□□□□ -1.65
CPS1-208ENST00000497121 NDUFS6O75380 124 aaKnown RBP4.76□□□□□ -1.65
CPS1-208ENST00000497121 CRPP02741 224 aa4.76□□□□□ -1.65
CPS1-208ENST00000497121 TWIST1Q15672 202 aa4.76□□□□□ -1.65
CPS1-208ENST00000497121 CLPSL2Q6UWE3 100 aa4.76□□□□□ -1.65
CPS1-208ENST00000497121 LINC00528Q8N1L1 170 aa4.76□□□□□ -1.65
CPS1-208ENST00000497121 CIRBP-AS1Q8TBR5 109 aa4.76□□□□□ -1.65
CPS1-208ENST00000497121 TMEM243Q9BU79 118 aa4.76□□□□□ -1.65
CPS1-208ENST00000497121 GATCO43716 136 aaKnown RBP4.75□□□□□ -1.65
CPS1-208ENST00000497121 GAS8-AS1O95177 125 aa4.75□□□□□ -1.65
CPS1-208ENST00000497121 SLPIP03973 132 aa4.75□□□□□ -1.65
CPS1-208ENST00000497121 SRP19P09132 144 aaKnown RBP4.75□□□□□ -1.65
CPS1-208ENST00000497121 REG3AQ06141 175 aa4.75□□□□□ -1.65
CPS1-208ENST00000497121 C14orf177Q52M58 125 aa4.75□□□□□ -1.65
CPS1-208ENST00000497121 CT83Q5H943 113 aa4.75□□□□□ -1.65
CPS1-208ENST00000497121 DGAT2L7PQ6IED9 249 aa4.75□□□□□ -1.65
CPS1-208ENST00000497121 SDIM1Q6ZPB5 146 aa4.75□□□□□ -1.65
CPS1-208ENST00000497121 LINC01551Q86U37 167 aa4.75□□□□□ -1.65
CPS1-208ENST00000497121 C9orf163Q8N9P6 203 aa4.75□□□□□ -1.65
CPS1-208ENST00000497121 RPL39LQ96EH5 51 aaKnown RBP4.75□□□□□ -1.65
CPS1-208ENST00000497121 IGLV10-54A0A075B6I4 117 aa4.74□□□□□ -1.65
CPS1-208ENST00000497121 TRAV8-4A0A0B4J246 113 aa4.74□□□□□ -1.65
CPS1-208ENST00000497121 FAM231BA6NCW3 169 aa4.74□□□□□ -1.65
CPS1-208ENST00000497121 C9JQL5 133 aa4.74□□□□□ -1.65
CPS1-208ENST00000497121 PANO1I0J062 215 aa4.74□□□□□ -1.65
CPS1-208ENST00000497121 HLA-DQA1P01909 254 aa4.74□□□□□ -1.65
CPS1-208ENST00000497121 COTL1Q14019 142 aa4.74□□□□□ -1.65
CPS1-208ENST00000497121 RNF185Q96GF1 192 aa4.74□□□□□ -1.65
CPS1-208ENST00000497121 TRBV6-5A0A0K0K1A5 114 aa4.73□□□□□ -1.65
CPS1-208ENST00000497121 A8MWL6 223 aa4.73□□□□□ -1.65
CPS1-208ENST00000497121 NCR2O95944 276 aa4.73□□□□□ -1.65
CPS1-208ENST00000497121 PLA2G1BP04054 148 aaKnown RBP4.73□□□□□ -1.65
CPS1-208ENST00000497121 AMTP48728 403 aa4.73□□□□□ -1.65
CPS1-208ENST00000497121 CNBPP62633 177 aaKnown RBP4.73□□□□□ -1.65
CPS1-208ENST00000497121 CLRN3Q8NCR9 226 aa4.73□□□□□ -1.65
CPS1-208ENST00000497121 TSKUQ8WUA8 353 aa4.73□□□□□ -1.65
CPS1-208ENST00000497121 OSTCQ9NRP0 149 aa4.73□□□□□ -1.65
CPS1-208ENST00000497121 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.73□□□□□ -1.65
CPS1-208ENST00000497121 SDHAF1A6NFY7 115 aa4.72□□□□□ -1.65
CPS1-208ENST00000497121 ESDP10768 282 aa4.72□□□□□ -1.65
CPS1-208ENST00000497121 CEBPGP53567 150 aa4.72□□□□□ -1.65
CPS1-208ENST00000497121 POLR2KP53803 58 aaKnown RBP4.72□□□□□ -1.65
CPS1-208ENST00000497121 CIRBPQ14011 172 aaKnown RBP4.72□□□□□ -1.65
CPS1-208ENST00000497121 C10orf91Q5T1B1 145 aa4.72□□□□□ -1.65
CPS1-208ENST00000497121 SMIM7Q9BQ49 75 aa4.72□□□□□ -1.65
CPS1-208ENST00000497121 EIF5A2Q9GZV4 153 aaKnown RBP4.72□□□□□ -1.65
CPS1-208ENST00000497121 TMEM191AQ9H0A3 160 aa4.72□□□□□ -1.65
CPS1-208ENST00000497121 V9GYV3 84 aa4.72□□□□□ -1.65
CPS1-208ENST00000497121 UBR4Q5T4S7 5183 aa4.72□□□□□ -1.65
CPS1-208ENST00000497121 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.71□□□□□ -1.66
CPS1-208ENST00000497121 A0A1B0GUT8 65 aa4.71□□□□□ -1.66
CPS1-208ENST00000497121 IGKV2-29A2NJV5 120 aaPredicted RBP4.71□□□□□ -1.66
CPS1-208ENST00000497121 GAGE12HA6NDE8 117 aa4.71□□□□□ -1.66
CPS1-208ENST00000497121 ZNF727A8MUV8 499 aa4.71□□□□□ -1.66
CPS1-208ENST00000497121 HIGD1CA8MV81 97 aa4.71□□□□□ -1.66
CPS1-208ENST00000497121 KRTAP29-1A8MX34 341 aaPredicted RBP4.71□□□□□ -1.66
CPS1-208ENST00000497121 H7C423 109 aa4.71□□□□□ -1.66
CPS1-208ENST00000497121 TSHBP01222 138 aa4.71□□□□□ -1.66
CPS1-208ENST00000497121 FGF6P10767 208 aa4.71□□□□□ -1.66
CPS1-208ENST00000497121 RAB4AP20338 218 aa4.71□□□□□ -1.66
CPS1-208ENST00000497121 RPS10P46783 165 aaKnown RBP4.71□□□□□ -1.66
CPS1-208ENST00000497121 SRSF3P84103 164 aaKnown RBP4.71□□□□□ -1.66
CPS1-208ENST00000497121 SMIM15Q7Z3B0 74 aa4.71□□□□□ -1.66
CPS1-208ENST00000497121 C15orf56Q8N910 161 aa4.71□□□□□ -1.66
CPS1-208ENST00000497121 ISOC2Q96AB3 205 aa4.71□□□□□ -1.66
CPS1-208ENST00000497121 TNXBP22105 4242 aa4.7□□□□□ -1.66
CPS1-208ENST00000497121 TRBV27A0A0K0K1C4 114 aa4.7□□□□□ -1.66
CPS1-208ENST00000497121 LOC105371267A0A1B0GV96 52 aa4.7□□□□□ -1.66
CPS1-208ENST00000497121 TMEM218A2RU14 115 aa4.7□□□□□ -1.66
CPS1-208ENST00000497121 I3L3M4 83 aa4.7□□□□□ -1.66
CPS1-208ENST00000497121 UBE2L6O14933 153 aa4.7□□□□□ -1.66
CPS1-208ENST00000497121 HNRNPA3P51991 378 aaKnown RBP4.7□□□□□ -1.66
CPS1-208ENST00000497121 RPL23P62829 140 aaKnown RBP4.7□□□□□ -1.66
CPS1-208ENST00000497121 TMEM241Q24JQ0 296 aa4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms