RNA–Protein interactions for RNA: ENST00000496549.5

CRNKL1-205, Transcript of crooked neck pre-mRNA splicing factor 1, human

TSL 1 (best)

Gene CRNKL1, Length 4,093 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CRNKL1-205	ENST00000496549	LECT2	O14960	151 aa		6.15	□□□□□ -1.43
CRNKL1-205	ENST00000496549	HTN1	P15515	57 aa		6.15	□□□□□ -1.43
CRNKL1-205	ENST00000496549	LINC00308	Q8TCZ7	52 aa		6.15	□□□□□ -1.43
CRNKL1-205	ENST00000496549	ASPM	Q8IZT6	3477 aa		6.14	□□□□□ -1.43
CRNKL1-205	ENST00000496549	TRBV27	A0A0K0K1C4	114 aa		6.14	□□□□□ -1.43
CRNKL1-205	ENST00000496549	C9orf47	Q6ZRZ4	202 aa		6.14	□□□□□ -1.43
CRNKL1-205	ENST00000496549		Q6ZSV7	163 aa		6.14	□□□□□ -1.43
CRNKL1-205	ENST00000496549	IL17D	Q8TAD2	202 aa		6.14	□□□□□ -1.43
CRNKL1-205	ENST00000496549	IGF2R	P11717	2491 aa		6.14	□□□□□ -1.43
CRNKL1-205	ENST00000496549	ARHGAP32	A7KAX9	2087 aa		6.14	□□□□□ -1.43
CRNKL1-205	ENST00000496549	SOSTDC1	Q6X4U4	206 aa		6.14	□□□□□ -1.43
CRNKL1-205	ENST00000496549	TMEM178B	H3BS89	294 aa		6.14	□□□□□ -1.43
CRNKL1-205	ENST00000496549	C15orf32	Q32M92	178 aa		6.14	□□□□□ -1.43
CRNKL1-205	ENST00000496549	PRSS33	Q8NF86	280 aa		6.14	□□□□□ -1.43
CRNKL1-205	ENST00000496549	LINC00574	Q9H8X3	128 aa		6.14	□□□□□ -1.43
CRNKL1-205	ENST00000496549	LINC00846	Q9NV44	126 aa		6.14	□□□□□ -1.43
CRNKL1-205	ENST00000496549	ACACA	Q13085	2346 aa		6.13	□□□□□ -1.43
CRNKL1-205	ENST00000496549	IGHV1OR15-1	A0A075B7D0	117 aa		6.13	□□□□□ -1.43
CRNKL1-205	ENST00000496549	GNRH2	O43555	120 aa		6.13	□□□□□ -1.43
CRNKL1-205	ENST00000496549	LHB	P01229	141 aa		6.13	□□□□□ -1.43
CRNKL1-205	ENST00000496549	RNASE13	Q5GAN3	156 aa	Known RBP	6.13	□□□□□ -1.43
CRNKL1-205	ENST00000496549	PSMG3-AS1	Q96PY0	264 aa		6.13	□□□□□ -1.43
CRNKL1-205	ENST00000496549	FUS	P35637	526 aa	Known RBP eCLIP	6.13	□□□□□ -1.43
CRNKL1-205	ENST00000496549	NBL1	P41271	181 aa		6.13	□□□□□ -1.43
CRNKL1-205	ENST00000496549	CD164	Q04900	197 aa		6.13	□□□□□ -1.43
CRNKL1-205	ENST00000496549	FAM27E3	Q08E93	113 aa		6.13	□□□□□ -1.43
CRNKL1-205	ENST00000496549		K7ENP7	123 aa		6.13	□□□□□ -1.43
CRNKL1-205	ENST00000496549	PIK3CD-AS1	Q5SR53	167 aa		6.12	□□□□□ -1.43
CRNKL1-205	ENST00000496549	RUSC1-AS1	Q66K80	236 aa		6.12	□□□□□ -1.43
CRNKL1-205	ENST00000496549	C11orf21	Q9P2W6	132 aa		6.12	□□□□□ -1.43
CRNKL1-205	ENST00000496549	UBE2D4	Q9Y2X8	147 aa		6.12	□□□□□ -1.43
CRNKL1-205	ENST00000496549	FRY	Q5TBA9	3013 aa		6.12	□□□□□ -1.43
CRNKL1-205	ENST00000496549	MED13	Q9UHV7	2174 aa		6.12	□□□□□ -1.43
CRNKL1-205	ENST00000496549	CACNA1B	Q00975	2339 aa		6.12	□□□□□ -1.43
CRNKL1-205	ENST00000496549	MUC22	E2RYF6	1773 aa	Predicted RBP	6.12	□□□□□ -1.43
CRNKL1-205	ENST00000496549	IGLV4-3	A0A075B6K6	122 aa		6.12	□□□□□ -1.43
CRNKL1-205	ENST00000496549	IGHV4OR15-8	A0A075B7B6	117 aa		6.12	□□□□□ -1.43
CRNKL1-205	ENST00000496549		A0A087WW49	117 aa		6.12	□□□□□ -1.43
CRNKL1-205	ENST00000496549	NCR3	O14931	201 aa		6.12	□□□□□ -1.43
CRNKL1-205	ENST00000496549	CCK	P06307	115 aa		6.12	□□□□□ -1.43
CRNKL1-205	ENST00000496549	POLR2K	P53803	58 aa	Known RBP	6.12	□□□□□ -1.43
CRNKL1-205	ENST00000496549	MBD3L2B	A0A1B0GVZ6	204 aa	Predicted RBP	6.11	□□□□□ -1.43
CRNKL1-205	ENST00000496549	UBE2L6	O14933	153 aa		6.11	□□□□□ -1.43
CRNKL1-205	ENST00000496549	ROS1	P08922	2347 aa		6.11	□□□□□ -1.43
CRNKL1-205	ENST00000496549	ZFYVE26	Q68DK2	2539 aa		6.11	□□□□□ -1.43
CRNKL1-205	ENST00000496549	MIF	P14174	115 aa		6.11	□□□□□ -1.43
CRNKL1-205	ENST00000496549	SND1-IT1	Q9HBX3	110 aa		6.11	□□□□□ -1.43
CRNKL1-205	ENST00000496549	POLE	Q07864	2286 aa		6.11	□□□□□ -1.43
CRNKL1-205	ENST00000496549	OVOL3	O00110	214 aa		6.11	□□□□□ -1.43
CRNKL1-205	ENST00000496549	NDUFA1	O15239	70 aa		6.11	□□□□□ -1.43
CRNKL1-205	ENST00000496549	BCE1	O60756	84 aa		6.11	□□□□□ -1.43
CRNKL1-205	ENST00000496549	PRB3	Q04118	309 aa	Predicted RBP	6.11	□□□□□ -1.43
CRNKL1-205	ENST00000496549	ADAMTSL4-AS1	Q5T5F5	129 aa		6.11	□□□□□ -1.43
CRNKL1-205	ENST00000496549	WFDC9	Q8NEX5	89 aa		6.11	□□□□□ -1.43
CRNKL1-205	ENST00000496549	PRRC2A	P48634	2157 aa	Known RBP	6.11	□□□□□ -1.43
CRNKL1-205	ENST00000496549	LRP4	O75096	1905 aa		6.11	□□□□□ -1.43
CRNKL1-205	ENST00000496549	CFAP47	Q6ZTR5	3102 aa		6.1	□□□□□ -1.43
CRNKL1-205	ENST00000496549	PLAC8L1	A1L4L8	177 aa		6.1	□□□□□ -1.43
CRNKL1-205	ENST00000496549	TSHB	P01222	138 aa		6.1	□□□□□ -1.43
CRNKL1-205	ENST00000496549	TMEM89	A2RUT3	159 aa		6.1	□□□□□ -1.43
CRNKL1-205	ENST00000496549	LYRM9	A8MSI8	78 aa		6.1	□□□□□ -1.43
CRNKL1-205	ENST00000496549	OXT	P01178	125 aa		6.1	□□□□□ -1.43
CRNKL1-205	ENST00000496549	HILS1	P60008	231 aa		6.1	□□□□□ -1.43
CRNKL1-205	ENST00000496549	IGLV11-55	A0A075B6I3	123 aa		6.09	□□□□□ -1.43
CRNKL1-205	ENST00000496549	TMEM256-PLSCR3	K7ERE1	68 aa		6.09	□□□□□ -1.43
CRNKL1-205	ENST00000496549		Q0VFX4	171 aa		6.09	□□□□□ -1.43
CRNKL1-205	ENST00000496549	TRBV10-3	A0A0K0K1G6	114 aa		6.09	□□□□□ -1.43
CRNKL1-205	ENST00000496549	RMI2	Q96E14	147 aa		6.09	□□□□□ -1.43
CRNKL1-205	ENST00000496549	SPRR3	Q9UBC9	169 aa		6.09	□□□□□ -1.43
CRNKL1-205	ENST00000496549	TRBV6-5	A0A0K0K1A5	114 aa		6.09	□□□□□ -1.43
CRNKL1-205	ENST00000496549		A8MZ25	164 aa		6.09	□□□□□ -1.43
CRNKL1-205	ENST00000496549	IGKV3-20	P01619	116 aa		6.09	□□□□□ -1.43
CRNKL1-205	ENST00000496549	CTSG	P08311	255 aa		6.09	□□□□□ -1.43
CRNKL1-205	ENST00000496549	IGLV1-44	P01699	117 aa		6.09	□□□□□ -1.44
CRNKL1-205	ENST00000496549	ESRG	Q1W209	222 aa		6.09	□□□□□ -1.44
CRNKL1-205	ENST00000496549	ZNF672	Q499Z4	452 aa	Predicted RBP	6.09	□□□□□ -1.44
CRNKL1-205	ENST00000496549	AMELX	Q99217	191 aa		6.09	□□□□□ -1.44
CRNKL1-205	ENST00000496549	VMO1	Q7Z5L0	202 aa		6.08	□□□□□ -1.44
CRNKL1-205	ENST00000496549	APRG1	Q8IVJ8	170 aa		6.08	□□□□□ -1.44
CRNKL1-205	ENST00000496549	SS18	Q15532	418 aa		6.08	□□□□□ -1.44
CRNKL1-205	ENST00000496549	FAM19A1	Q7Z5A9	133 aa		6.08	□□□□□ -1.44
CRNKL1-205	ENST00000496549	CYSTM1	Q9H1C7	97 aa		6.08	□□□□□ -1.44
CRNKL1-205	ENST00000496549	APC2	O95996	2303 aa		6.08	□□□□□ -1.44
CRNKL1-205	ENST00000496549	IGHV3-73	A0A0B4J1V6	119 aa		6.07	□□□□□ -1.44
CRNKL1-205	ENST00000496549	C9orf106	Q8NAJ2	232 aa		6.07	□□□□□ -1.44
CRNKL1-205	ENST00000496549	SMAD5-AS1	Q9Y6J3	95 aa		6.07	□□□□□ -1.44
CRNKL1-205	ENST00000496549	GPHB5	Q86YW7	130 aa		6.07	□□□□□ -1.44
CRNKL1-205	ENST00000496549	ZFAND3	Q9H8U3	227 aa		6.07	□□□□□ -1.44
CRNKL1-205	ENST00000496549	WDFY3	Q8IZQ1	3526 aa		6.07	□□□□□ -1.44
CRNKL1-205	ENST00000496549	SPTA1	P02549	2419 aa		6.07	□□□□□ -1.44
CRNKL1-205	ENST00000496549	LY6L	H3BQJ8	138 aa		6.07	□□□□□ -1.44
CRNKL1-205	ENST00000496549	SAA4	P35542	130 aa		6.07	□□□□□ -1.44
CRNKL1-205	ENST00000496549	RPL28	P46779	137 aa	Known RBP	6.07	□□□□□ -1.44
CRNKL1-205	ENST00000496549	PATE3	B3GLJ2	98 aa		6.06	□□□□□ -1.44
CRNKL1-205	ENST00000496549	LYPD2	Q6UXB3	125 aa		6.06	□□□□□ -1.44
CRNKL1-205	ENST00000496549	ZNF580	Q9UK33	172 aa		6.06	□□□□□ -1.44
CRNKL1-205	ENST00000496549	IGLV3-9	A0A075B6K5	115 aa		6.06	□□□□□ -1.44
CRNKL1-205	ENST00000496549	SPTSSB	Q8NFR3	76 aa		6.06	□□□□□ -1.44
CRNKL1-205	ENST00000496549	FAM110D	Q8TAY7	271 aa	Predicted RBP	6.06	□□□□□ -1.44
CRNKL1-205	ENST00000496549	ARRDC1-AS1	Q9H2J1	176 aa		6.06	□□□□□ -1.44

Retrieved 100 of 20,778 RNA–protein pairs in 179.1 ms