RNA–Protein interactions for RNA: ENST00000496530.1

SMARCD3-215, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 2

Gene SMARCD3, Length 468 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-215ENST00000496530 LINC00336Q6ZUF6 198 aa5.65□□□□□ -1.5
SMARCD3-215ENST00000496530 DAZ4Q86SG3 579 aaKnown RBP5.65□□□□□ -1.5
SMARCD3-215ENST00000496530 GTSF1LQ9H1H1 148 aa5.65□□□□□ -1.5
SMARCD3-215ENST00000496530 Q9H8V8 135 aa5.65□□□□□ -1.5
SMARCD3-215ENST00000496530 DAZ3Q9NR90 486 aaKnown RBP5.65□□□□□ -1.5
SMARCD3-215ENST00000496530 LAMTOR2Q9Y2Q5 125 aa5.65□□□□□ -1.5
SMARCD3-215ENST00000496530 MRPS16Q9Y3D3 137 aaKnown RBP5.65□□□□□ -1.5
SMARCD3-215ENST00000496530 LINC00588Q9Y4M8 146 aa5.65□□□□□ -1.5
SMARCD3-215ENST00000496530 LYSTQ99698 3801 aa5.65□□□□□ -1.51
SMARCD3-215ENST00000496530 TRAV8-6A0A0B4J262 113 aa5.64□□□□□ -1.51
SMARCD3-215ENST00000496530 TRBV6-5A0A0K0K1A5 114 aa5.64□□□□□ -1.51
SMARCD3-215ENST00000496530 PHOX2AO14813 284 aa5.64□□□□□ -1.51
SMARCD3-215ENST00000496530 UBE2L6O14933 153 aa5.64□□□□□ -1.51
SMARCD3-215ENST00000496530 LINC00614P0C842 121 aa5.64□□□□□ -1.51
SMARCD3-215ENST00000496530 LORP23490 312 aaPredicted RBP5.64□□□□□ -1.51
SMARCD3-215ENST00000496530 POLR2KP53803 58 aaKnown RBP5.64□□□□□ -1.51
SMARCD3-215ENST00000496530 ESRGQ1W209 222 aa5.64□□□□□ -1.51
SMARCD3-215ENST00000496530 Q8N8P6 123 aa5.64□□□□□ -1.51
SMARCD3-215ENST00000496530 CHCHD5Q9BSY4 110 aa5.64□□□□□ -1.51
SMARCD3-215ENST00000496530 UPK3BQ9BT76 320 aa5.64□□□□□ -1.51
SMARCD3-215ENST00000496530 TMEM70Q9BUB7 260 aa5.64□□□□□ -1.51
SMARCD3-215ENST00000496530 NXT2Q9NPJ8 142 aaKnown RBP5.64□□□□□ -1.51
SMARCD3-215ENST00000496530 KMT2CQ8NEZ4 4911 aaKnown RBP5.63□□□□□ -1.51
SMARCD3-215ENST00000496530 TRAV9-2A0A087WT02 112 aa5.63□□□□□ -1.51
SMARCD3-215ENST00000496530 IGHV1-24A0A0C4DH33 117 aa5.63□□□□□ -1.51
SMARCD3-215ENST00000496530 NBDYA0A0U1RRE5 68 aa5.63□□□□□ -1.51
SMARCD3-215ENST00000496530 S100A6P06703 90 aa5.63□□□□□ -1.51
SMARCD3-215ENST00000496530 BTF3P20290 206 aaKnown RBP5.63□□□□□ -1.51
SMARCD3-215ENST00000496530 AMTP48728 403 aa5.63□□□□□ -1.51
SMARCD3-215ENST00000496530 GAGE6Q13070 117 aa5.63□□□□□ -1.51
SMARCD3-215ENST00000496530 LAGE3Q14657 143 aa5.63□□□□□ -1.51
SMARCD3-215ENST00000496530 TMEM97Q5BJF2 176 aa5.63□□□□□ -1.51
SMARCD3-215ENST00000496530 C1orf134Q5TEV5 83 aa5.63□□□□□ -1.51
SMARCD3-215ENST00000496530 DGAT2L7PQ6IED9 249 aa5.63□□□□□ -1.51
SMARCD3-215ENST00000496530 C18orf32Q8TCD1 76 aa5.63□□□□□ -1.51
SMARCD3-215ENST00000496530 SMIM2Q9BVW6 85 aa5.63□□□□□ -1.51
SMARCD3-215ENST00000496530 TRBV25-1A0A075B6N4 114 aa5.62□□□□□ -1.51
SMARCD3-215ENST00000496530 EREGO14944 169 aa5.62□□□□□ -1.51
SMARCD3-215ENST00000496530 SIVA1O15304 175 aa5.62□□□□□ -1.51
SMARCD3-215ENST00000496530 Q0VG73 95 aa5.62□□□□□ -1.51
SMARCD3-215ENST00000496530 AMMECR1LQ6DCA0 310 aa5.62□□□□□ -1.51
SMARCD3-215ENST00000496530 TMEM243Q9BU79 118 aa5.62□□□□□ -1.51
SMARCD3-215ENST00000496530 TENM2Q9NT68 2774 aa5.61□□□□□ -1.51
SMARCD3-215ENST00000496530 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.61□□□□□ -1.51
SMARCD3-215ENST00000496530 TRBV6-8A0A0A6YYG3 113 aa5.61□□□□□ -1.51
SMARCD3-215ENST00000496530 TRBV27A0A0K0K1C4 114 aa5.61□□□□□ -1.51
SMARCD3-215ENST00000496530 IGKV2-29A2NJV5 120 aaPredicted RBP5.61□□□□□ -1.51
SMARCD3-215ENST00000496530 K7EP13 123 aa5.61□□□□□ -1.51
SMARCD3-215ENST00000496530 HIST1H2BKO60814 126 aa5.61□□□□□ -1.51
SMARCD3-215ENST00000496530 TSHBP01222 138 aa5.61□□□□□ -1.51
SMARCD3-215ENST00000496530 HIST1H2BJP06899 126 aa5.61□□□□□ -1.51
SMARCD3-215ENST00000496530 HIST1H2BOP23527 126 aa5.61□□□□□ -1.51
SMARCD3-215ENST00000496530 G0S2P27469 103 aa5.61□□□□□ -1.51
SMARCD3-215ENST00000496530 HIST1H2BBP33778 126 aa5.61□□□□□ -1.51
SMARCD3-215ENST00000496530 HIST1H2BDP58876 126 aa5.61□□□□□ -1.51
SMARCD3-215ENST00000496530 HIST1H2BCP62807 126 aa5.61□□□□□ -1.51
SMARCD3-215ENST00000496530 PMCHL1Q16048 86 aa5.61□□□□□ -1.51
SMARCD3-215ENST00000496530 HIST2H2BEQ16778 126 aa5.61□□□□□ -1.51
SMARCD3-215ENST00000496530 ORMDL2Q53FV1 153 aa5.61□□□□□ -1.51
SMARCD3-215ENST00000496530 HIST2H2BFQ5QNW6 126 aaPredicted RBP5.61□□□□□ -1.51
SMARCD3-215ENST00000496530 NTM-AS1Q6ZSK4 140 aa5.61□□□□□ -1.51
SMARCD3-215ENST00000496530 C6orf223Q8N319 242 aa5.61□□□□□ -1.51
SMARCD3-215ENST00000496530 FAM19A2Q8N3H0 131 aa5.61□□□□□ -1.51
SMARCD3-215ENST00000496530 HIST1H2BHQ93079 126 aa5.61□□□□□ -1.51
SMARCD3-215ENST00000496530 TMEM18Q96B42 140 aa5.61□□□□□ -1.51
SMARCD3-215ENST00000496530 HIST1H2BNQ99877 126 aa5.61□□□□□ -1.51
SMARCD3-215ENST00000496530 HIST1H2BMQ99879 126 aa5.61□□□□□ -1.51
SMARCD3-215ENST00000496530 A0A087WX48 190 aa5.6□□□□□ -1.51
SMARCD3-215ENST00000496530 PRSS29PA6NIE9 313 aa5.6□□□□□ -1.51
SMARCD3-215ENST00000496530 NUPR1O60356 82 aa5.6□□□□□ -1.51
SMARCD3-215ENST00000496530 HSBP1O75506 76 aa5.6□□□□□ -1.51
SMARCD3-215ENST00000496530 IGHV3-30P01768 117 aa5.6□□□□□ -1.51
SMARCD3-215ENST00000496530 IGHV3-33P01772 117 aa5.6□□□□□ -1.51
SMARCD3-215ENST00000496530 IGHV3-30-3P0DP02 117 aa5.6□□□□□ -1.51
SMARCD3-215ENST00000496530 IGHV3-30-5P0DP03 117 aa5.6□□□□□ -1.51
SMARCD3-215ENST00000496530 FABP4P15090 132 aa5.6□□□□□ -1.51
SMARCD3-215ENST00000496530 ODF1Q14990 250 aa5.6□□□□□ -1.51
SMARCD3-215ENST00000496530 LELP1Q5T871 98 aa5.6□□□□□ -1.51
SMARCD3-215ENST00000496530 Q6ZR54 194 aa5.6□□□□□ -1.51
SMARCD3-215ENST00000496530 C10orf126Q8N4M7 172 aa5.6□□□□□ -1.51
SMARCD3-215ENST00000496530 TMEM101Q96IK0 257 aa5.6□□□□□ -1.51
SMARCD3-215ENST00000496530 SCGB3A1Q96QR1 104 aa5.6□□□□□ -1.51
SMARCD3-215ENST00000496530 AP5S1Q9NUS5 200 aa5.6□□□□□ -1.51
SMARCD3-215ENST00000496530 IGKV3OR2-268A0A0C4DH90 116 aa5.59□□□□□ -1.51
SMARCD3-215ENST00000496530 SERF1AO75920 110 aa5.59□□□□□ -1.51
SMARCD3-215ENST00000496530 TIRAPP58753 221 aa5.59□□□□□ -1.51
SMARCD3-215ENST00000496530 RPL32P62910 135 aaKnown RBP5.59□□□□□ -1.51
SMARCD3-215ENST00000496530 PDZD11Q5EBL8 140 aa5.59□□□□□ -1.51
SMARCD3-215ENST00000496530 CHCHD1Q96BP2 118 aaKnown RBP5.59□□□□□ -1.51
SMARCD3-215ENST00000496530 ALMS1Q8TCU4 4167 aa5.59□□□□□ -1.51
SMARCD3-215ENST00000496530 S100A2P29034 98 aa5.58□□□□□ -1.52
SMARCD3-215ENST00000496530 SMCPP49901 116 aaPredicted RBP5.58□□□□□ -1.52
SMARCD3-215ENST00000496530 SNRPEP62304 92 aaKnown RBP5.58□□□□□ -1.52
SMARCD3-215ENST00000496530 RPL39P62891 51 aaKnown RBP5.58□□□□□ -1.52
SMARCD3-215ENST00000496530 SMAGPQ0VAQ4 97 aa5.58□□□□□ -1.52
SMARCD3-215ENST00000496530 C2orf66Q6UXQ4 117 aa5.58□□□□□ -1.52
SMARCD3-215ENST00000496530 NFE4Q86UQ8 179 aa5.58□□□□□ -1.52
SMARCD3-215ENST00000496530 CHCHD7Q9BUK0 85 aa5.58□□□□□ -1.52
SMARCD3-215ENST00000496530 CYSLTR1Q9Y271 337 aa5.58□□□□□ -1.52
SMARCD3-215ENST00000496530 PLECQ15149 4684 aaKnown RBP5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms