RNA–Protein interactions for RNA: ENST00000496363.5

USF1-207, Transcript of upstream transcription factor 1, humanhuman

TSL 2

Gene USF1, Length 990 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-207ENST00000496363 UBE2L6O14933 153 aa8.27□□□□□ -1.09
USF1-207ENST00000496363 IFNA1P01562 189 aa8.27□□□□□ -1.09
USF1-207ENST00000496363 TRGC1P0CF51 173 aa8.27□□□□□ -1.09
USF1-207ENST00000496363 NTF3P20783 257 aa8.27□□□□□ -1.09
USF1-207ENST00000496363 AMTP48728 403 aa8.27□□□□□ -1.09
USF1-207ENST00000496363 C15orf56Q8N910 161 aa8.27□□□□□ -1.09
USF1-207ENST00000496363 DPH3Q96FX2 82 aa8.27□□□□□ -1.09
USF1-207ENST00000496363 LRP2P98164 4655 aa8.27□□□□□ -1.09
USF1-207ENST00000496363 TRAV26-2A0A0B4J265 109 aa8.26□□□□□ -1.09
USF1-207ENST00000496363 IGKV3OR2-268A0A0C4DH90 116 aa8.26□□□□□ -1.09
USF1-207ENST00000496363 XKRY2A2RUG3 117 aa8.26□□□□□ -1.09
USF1-207ENST00000496363 GAGE12HA6NDE8 117 aa8.26□□□□□ -1.09
USF1-207ENST00000496363 F2Z2F3 143 aa8.26□□□□□ -1.09
USF1-207ENST00000496363 CTRLP40313 264 aa8.26□□□□□ -1.09
USF1-207ENST00000496363 SULT1A2P50226 295 aa8.26□□□□□ -1.09
USF1-207ENST00000496363 MEF2BQ02080 365 aaPredicted RBP8.26□□□□□ -1.09
USF1-207ENST00000496363 COTL1Q14019 142 aa8.26□□□□□ -1.09
USF1-207ENST00000496363 SPACA4Q8TDM5 124 aa8.26□□□□□ -1.09
USF1-207ENST00000496363 MED9Q9NWA0 146 aa8.26□□□□□ -1.09
USF1-207ENST00000496363 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.25□□□□□ -1.09
USF1-207ENST00000496363 WDR73Q6P4I2 378 aa8.25□□□□□ -1.09
USF1-207ENST00000496363 Q6ZRU5 148 aa8.25□□□□□ -1.09
USF1-207ENST00000496363 NUDT10Q8NFP7 164 aa8.25□□□□□ -1.09
USF1-207ENST00000496363 SMIM12Q96EX1 92 aa8.25□□□□□ -1.09
USF1-207ENST00000496363 NUDT11Q96G61 164 aa8.25□□□□□ -1.09
USF1-207ENST00000496363 PDE6DO43924 150 aa8.24□□□□□ -1.09
USF1-207ENST00000496363 TWIST1Q15672 202 aa8.24□□□□□ -1.09
USF1-207ENST00000496363 HIGD2BQ4VC39 106 aa8.24□□□□□ -1.09
USF1-207ENST00000496363 C9orf62Q8N4C0 152 aa8.24□□□□□ -1.09
USF1-207ENST00000496363 GATD1Q8NB37 220 aa8.24□□□□□ -1.09
USF1-207ENST00000496363 RPL39LQ96EH5 51 aaKnown RBP8.24□□□□□ -1.09
USF1-207ENST00000496363 RNF185Q96GF1 192 aa8.24□□□□□ -1.09
USF1-207ENST00000496363 TEX46H3BTG2 121 aa8.23□□□□□ -1.09
USF1-207ENST00000496363 PHOX2AO14813 284 aa8.23□□□□□ -1.09
USF1-207ENST00000496363 BCL2P10415 239 aa8.23□□□□□ -1.09
USF1-207ENST00000496363 COX6A2Q02221 97 aa8.23□□□□□ -1.09
USF1-207ENST00000496363 Q6ZNX1 250 aa8.23□□□□□ -1.09
USF1-207ENST00000496363 RNASE7Q9H1E1 156 aaKnown RBP8.23□□□□□ -1.09
USF1-207ENST00000496363 PLAC8Q9NZF1 115 aa8.23□□□□□ -1.09
USF1-207ENST00000496363 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.22□□□□□ -1.09
USF1-207ENST00000496363 IGKV2-29A2NJV5 120 aaPredicted RBP8.22□□□□□ -1.09
USF1-207ENST00000496363 K7EN84 100 aa8.22□□□□□ -1.09
USF1-207ENST00000496363 FOXA3P55318 350 aaPredicted RBP8.22□□□□□ -1.09
USF1-207ENST00000496363 CNFNQ9BYD5 112 aa8.22□□□□□ -1.09
USF1-207ENST00000496363 RPP21Q9H633 154 aaKnown RBP8.22□□□□□ -1.09
USF1-207ENST00000496363 BIN3Q9NQY0 253 aa8.22□□□□□ -1.09
USF1-207ENST00000496363 IGKV2-24A0A0C4DH68 120 aa8.21□□□□□ -1.1
USF1-207ENST00000496363 AMMECR1LQ6DCA0 310 aa8.21□□□□□ -1.1
USF1-207ENST00000496363 EIF5AL1Q6IS14 154 aaKnown RBP8.21□□□□□ -1.1
USF1-207ENST00000496363 CFAP161Q6P656 301 aa8.21□□□□□ -1.1
USF1-207ENST00000496363 PRSS3P2Q8NHM4 247 aa8.21□□□□□ -1.1
USF1-207ENST00000496363 GTSF1Q8WW33 167 aa8.21□□□□□ -1.1
USF1-207ENST00000496363 CHCHD10Q8WYQ3 142 aaPredicted RBP8.21□□□□□ -1.1
USF1-207ENST00000496363 RPS10P46783 165 aaKnown RBP8.2□□□□□ -1.1
USF1-207ENST00000496363 MAJINQ3KP22 176 aa8.2□□□□□ -1.1
USF1-207ENST00000496363 RNASEKQ6P5S7 137 aaKnown RBP8.2□□□□□ -1.1
USF1-207ENST00000496363 OCC1Q8TAD7 63 aa8.2□□□□□ -1.1
USF1-207ENST00000496363 APCSP02743 223 aa8.19□□□□□ -1.1
USF1-207ENST00000496363 C7orf33Q8WU49 177 aa8.19□□□□□ -1.1
USF1-207ENST00000496363 GVQW2A0A096LPI5 108 aaPredicted RBP8.18□□□□□ -1.1
USF1-207ENST00000496363 NDUFS6O75380 124 aaKnown RBP8.18□□□□□ -1.1
USF1-207ENST00000496363 NCR2O95944 276 aa8.18□□□□□ -1.1
USF1-207ENST00000496363 FGF6P10767 208 aa8.18□□□□□ -1.1
USF1-207ENST00000496363 FOXI1Q12951 378 aa8.18□□□□□ -1.1
USF1-207ENST00000496363 ODF1Q14990 250 aa8.18□□□□□ -1.1
USF1-207ENST00000496363 LYPD6BQ8NI32 183 aa8.18□□□□□ -1.1
USF1-207ENST00000496363 A0A096LNI7 61 aa8.17□□□□□ -1.1
USF1-207ENST00000496363 SDHAF1A6NFY7 115 aa8.17□□□□□ -1.1
USF1-207ENST00000496363 GAS8-AS1O95177 125 aa8.17□□□□□ -1.1
USF1-207ENST00000496363 PRR3P79522 188 aaKnown RBP8.17□□□□□ -1.1
USF1-207ENST00000496363 STPG4Q8N801 248 aa8.17□□□□□ -1.1
USF1-207ENST00000496363 LINC00526Q96FQ7 95 aa8.17□□□□□ -1.1
USF1-207ENST00000496363 FAM231BA6NCW3 169 aa8.16□□□□□ -1.1
USF1-207ENST00000496363 XCL1P47992 114 aa8.16□□□□□ -1.1
USF1-207ENST00000496363 SMIM15Q7Z3B0 74 aa8.16□□□□□ -1.1
USF1-207ENST00000496363 SLC51BQ86UW2 128 aa8.16□□□□□ -1.1
USF1-207ENST00000496363 H7C423 109 aa8.15□□□□□ -1.1
USF1-207ENST00000496363 GATCO43716 136 aaKnown RBP8.15□□□□□ -1.1
USF1-207ENST00000496363 PMCHP20382 165 aa8.15□□□□□ -1.1
USF1-207ENST00000496363 OR5A1Q8NGJ0 315 aa8.15□□□□□ -1.1
USF1-207ENST00000496363 TMEM242Q9NWH2 141 aa8.15□□□□□ -1.1
USF1-207ENST00000496363 I3L3M4 83 aa8.14□□□□□ -1.11
USF1-207ENST00000496363 CCL25O15444 150 aa8.14□□□□□ -1.11
USF1-207ENST00000496363 TSHBP01222 138 aa8.14□□□□□ -1.11
USF1-207ENST00000496363 TAGLN2P37802 199 aaKnown RBP8.14□□□□□ -1.11
USF1-207ENST00000496363 TCTE3Q8IZS6 198 aa8.14□□□□□ -1.11
USF1-207ENST00000496363 RNF213Q63HN8 5207 aa8.14□□□□□ -1.11
USF1-207ENST00000496363 TRBV6-5A0A0K0K1A5 114 aa8.13□□□□□ -1.11
USF1-207ENST00000496363 LINC00959A0A1B0GUT2 108 aa8.13□□□□□ -1.11
USF1-207ENST00000496363 ESDP10768 282 aa8.13□□□□□ -1.11
USF1-207ENST00000496363 ZNF25P17030 456 aaPredicted RBP8.13□□□□□ -1.11
USF1-207ENST00000496363 TEX261Q6UWH6 196 aa8.13□□□□□ -1.11
USF1-207ENST00000496363 BTF3L4Q96K17 158 aa8.13□□□□□ -1.11
USF1-207ENST00000496363 LINC01600Q96MT4 127 aa8.13□□□□□ -1.11
USF1-207ENST00000496363 IGHV1-58A0A0C4DH39 117 aa8.12□□□□□ -1.11
USF1-207ENST00000496363 CEBPGP53567 150 aa8.12□□□□□ -1.11
USF1-207ENST00000496363 FAM231DQ6ZW35 169 aa8.12□□□□□ -1.11
USF1-207ENST00000496363 TMEM101Q96IK0 257 aa8.12□□□□□ -1.11
USF1-207ENST00000496363 CARD19Q96LW7 228 aa8.12□□□□□ -1.11
USF1-207ENST00000496363 A8MWL6 223 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms