RNA–Protein interactions for RNA: ENST00000496189.1

SF3A1-209, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 693 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-209ENST00000496189 COX11Q9Y6N1 276 aa11.03□□□□□ -0.64
SF3A1-209ENST00000496189 IGHV1-24A0A0C4DH33 117 aa11.02□□□□□ -0.65
SF3A1-209ENST00000496189 TRBV6-5A0A0K0K1A5 114 aa11.02□□□□□ -0.65
SF3A1-209ENST00000496189 CKS2P33552 79 aa11.02□□□□□ -0.65
SF3A1-209ENST00000496189 COTL1Q14019 142 aa11.02□□□□□ -0.65
SF3A1-209ENST00000496189 MRPL51Q4U2R6 128 aaKnown RBP11.02□□□□□ -0.65
SF3A1-209ENST00000496189 SDHAF1A6NFY7 115 aa11.01□□□□□ -0.65
SF3A1-209ENST00000496189 CRPP02741 224 aa11.01□□□□□ -0.65
SF3A1-209ENST00000496189 PPBPP02775 128 aa11.01□□□□□ -0.65
SF3A1-209ENST00000496189 I3L3M4 83 aa11□□□□□ -0.65
SF3A1-209ENST00000496189 NCR2O95944 276 aa11□□□□□ -0.65
SF3A1-209ENST00000496189 PMCHP20382 165 aa11□□□□□ -0.65
SF3A1-209ENST00000496189 IQCJQ1A5X6 159 aa11□□□□□ -0.65
SF3A1-209ENST00000496189 PGPEP1Q9NXJ5 209 aa11□□□□□ -0.65
SF3A1-209ENST00000496189 KLK12Q9UKR0 248 aa11□□□□□ -0.65
SF3A1-209ENST00000496189 A0A087WTM6 91 aa10.99□□□□□ -0.65
SF3A1-209ENST00000496189 UBE2L6O14933 153 aa10.99□□□□□ -0.65
SF3A1-209ENST00000496189 Q0VG73 95 aa10.99□□□□□ -0.65
SF3A1-209ENST00000496189 NTM-AS1Q6ZSK4 140 aa10.99□□□□□ -0.65
SF3A1-209ENST00000496189 Q8N3U1 123 aa10.99□□□□□ -0.65
SF3A1-209ENST00000496189 TMEM243Q9BU79 118 aa10.99□□□□□ -0.65
SF3A1-209ENST00000496189 PKD1P98161 4303 aa10.98□□□□□ -0.65
SF3A1-209ENST00000496189 SMKR1H3BMG3 65 aa10.98□□□□□ -0.65
SF3A1-209ENST00000496189 ANGP03950 147 aaKnown RBP10.98□□□□□ -0.65
SF3A1-209ENST00000496189 AMTP48728 403 aa10.98□□□□□ -0.65
SF3A1-209ENST00000496189 CDPF1Q6NVV7 123 aa10.98□□□□□ -0.65
SF3A1-209ENST00000496189 UBE2WQ96B02 151 aa10.98□□□□□ -0.65
SF3A1-209ENST00000496189 TMEM70Q9BUB7 260 aa10.98□□□□□ -0.65
SF3A1-209ENST00000496189 IGKV2D-24A0A075B6R9 120 aa10.97□□□□□ -0.65
SF3A1-209ENST00000496189 VCYO14598 125 aa10.97□□□□□ -0.65
SF3A1-209ENST00000496189 GAS8-AS1O95177 125 aa10.97□□□□□ -0.65
SF3A1-209ENST00000496189 RPS10P46783 165 aaKnown RBP10.97□□□□□ -0.65
SF3A1-209ENST00000496189 SUMO2P61956 95 aaKnown RBP10.97□□□□□ -0.65
SF3A1-209ENST00000496189 SLC7A5P1Q8MH63 180 aa10.97□□□□□ -0.65
SF3A1-209ENST00000496189 ORMDL3Q8N138 153 aa10.97□□□□□ -0.65
SF3A1-209ENST00000496189 C20orf78Q9BR46 151 aa10.97□□□□□ -0.65
SF3A1-209ENST00000496189 D6R8Y8 96 aa10.96□□□□□ -0.65
SF3A1-209ENST00000496189 PHOX2AO14813 284 aa10.96□□□□□ -0.65
SF3A1-209ENST00000496189 APCSP02743 223 aa10.96□□□□□ -0.65
SF3A1-209ENST00000496189 GAGE6Q13070 117 aa10.96□□□□□ -0.65
SF3A1-209ENST00000496189 COX19Q49B96 90 aa10.96□□□□□ -0.65
SF3A1-209ENST00000496189 MPV17L2Q567V2 206 aa10.96□□□□□ -0.65
SF3A1-209ENST00000496189 NRACQ8N912 160 aa10.96□□□□□ -0.65
SF3A1-209ENST00000496189 TRBV24-1A0A075B6N3 115 aa10.95□□□□□ -0.66
SF3A1-209ENST00000496189 TRBV27A0A0K0K1C4 114 aa10.95□□□□□ -0.66
SF3A1-209ENST00000496189 TNFRSF6BO95407 300 aa10.95□□□□□ -0.66
SF3A1-209ENST00000496189 POLR2KP53803 58 aaKnown RBP10.95□□□□□ -0.66
SF3A1-209ENST00000496189 TMEM136Q6ZRR5 245 aa10.95□□□□□ -0.66
SF3A1-209ENST00000496189 KIR2DL4Q99706 377 aa10.95□□□□□ -0.66
SF3A1-209ENST00000496189 C1orf43Q9BWL3 253 aa10.95□□□□□ -0.66
SF3A1-209ENST00000496189 PKHD1P08F94 4074 aa10.95□□□□□ -0.66
SF3A1-209ENST00000496189 TCAPO15273 167 aa10.94□□□□□ -0.66
SF3A1-209ENST00000496189 FCER1GP30273 86 aa10.94□□□□□ -0.66
SF3A1-209ENST00000496189 KRTAP10-2P60368 255 aa10.94□□□□□ -0.66
SF3A1-209ENST00000496189 ATRAIDQ6UW56 229 aa10.94□□□□□ -0.66
SF3A1-209ENST00000496189 DEFB104AQ8WTQ1 72 aa10.94□□□□□ -0.66
SF3A1-209ENST00000496189 PRELID3AQ96N28 172 aa10.94□□□□□ -0.66
SF3A1-209ENST00000496189 LAMTOR2Q9Y2Q5 125 aa10.94□□□□□ -0.66
SF3A1-209ENST00000496189 H7C423 109 aa10.93□□□□□ -0.66
SF3A1-209ENST00000496189 HLA-DQA1P01909 254 aa10.93□□□□□ -0.66
SF3A1-209ENST00000496189 RPL32P62910 135 aaKnown RBP10.93□□□□□ -0.66
SF3A1-209ENST00000496189 NTN5Q8WTR8 489 aaPredicted RBP10.93□□□□□ -0.66
SF3A1-209ENST00000496189 RBX1P62877 108 aa10.92□□□□□ -0.66
SF3A1-209ENST00000496189 MIAQ16674 131 aa10.92□□□□□ -0.66
SF3A1-209ENST00000496189 Q8N976 141 aa10.92□□□□□ -0.66
SF3A1-209ENST00000496189 GNB1LQ9BYB4 327 aa10.92□□□□□ -0.66
SF3A1-209ENST00000496189 A0A1B0GUV1 79 aa10.91□□□□□ -0.66
SF3A1-209ENST00000496189 TSHBP01222 138 aa10.91□□□□□ -0.66
SF3A1-209ENST00000496189 NPYP01303 97 aa10.91□□□□□ -0.66
SF3A1-209ENST00000496189 MT-ND6P03923 174 aa10.91□□□□□ -0.66
SF3A1-209ENST00000496189 SMAGPQ0VAQ4 97 aa10.91□□□□□ -0.66
SF3A1-209ENST00000496189 AMMECR1LQ6DCA0 310 aa10.91□□□□□ -0.66
SF3A1-209ENST00000496189 IGLV5-52A0A0A0MRZ9 124 aa10.9□□□□□ -0.66
SF3A1-209ENST00000496189 LRCOL1A6NCL2 159 aa10.9□□□□□ -0.66
SF3A1-209ENST00000496189 Q8N814 137 aa10.9□□□□□ -0.66
SF3A1-209ENST00000496189 SMIM2Q9BVW6 85 aa10.9□□□□□ -0.66
SF3A1-209ENST00000496189 LINC00269Q8N2A0 174 aa10.89□□□□□ -0.67
SF3A1-209ENST00000496189 MAP1LC3AQ9H492 121 aa10.89□□□□□ -0.67
SF3A1-209ENST00000496189 DNAH11Q96DT5 4516 aa10.88□□□□□ -0.67
SF3A1-209ENST00000496189 CDK2AP2O75956 126 aa10.88□□□□□ -0.67
SF3A1-209ENST00000496189 ESDP10768 282 aa10.88□□□□□ -0.67
SF3A1-209ENST00000496189 ZNF25P17030 456 aaPredicted RBP10.88□□□□□ -0.67
SF3A1-209ENST00000496189 RAB5AP20339 215 aa10.88□□□□□ -0.67
SF3A1-209ENST00000496189 REG3AQ06141 175 aa10.88□□□□□ -0.67
SF3A1-209ENST00000496189 C14orf177Q52M58 125 aa10.88□□□□□ -0.67
SF3A1-209ENST00000496189 RNASEKQ6P5S7 137 aaKnown RBP10.88□□□□□ -0.67
SF3A1-209ENST00000496189 ENHOQ6UWT2 76 aa10.88□□□□□ -0.67
SF3A1-209ENST00000496189 TMEM18Q96B42 140 aa10.88□□□□□ -0.67
SF3A1-209ENST00000496189 TMEM101Q96IK0 257 aa10.88□□□□□ -0.67
SF3A1-209ENST00000496189 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.87□□□□□ -0.67
SF3A1-209ENST00000496189 IGKV2-29A2NJV5 120 aaPredicted RBP10.87□□□□□ -0.67
SF3A1-209ENST00000496189 GCSHP23434 173 aa10.87□□□□□ -0.67
SF3A1-209ENST00000496189 CLPSL2Q6UWE3 100 aa10.87□□□□□ -0.67
SF3A1-209ENST00000496189 BAALCQ8WXS3 180 aa10.87□□□□□ -0.67
SF3A1-209ENST00000496189 SMCO4Q9NRQ5 59 aa10.87□□□□□ -0.67
SF3A1-209ENST00000496189 TGIF2-C20orf24A0A0A6YYL0 155 aa10.86□□□□□ -0.67
SF3A1-209ENST00000496189 TRAV8-4A0A0B4J246 113 aa10.86□□□□□ -0.67
SF3A1-209ENST00000496189 PRSS47A8MTI9 375 aa10.86□□□□□ -0.67
SF3A1-209ENST00000496189 LECT2O14960 151 aa10.86□□□□□ -0.67
SF3A1-209ENST00000496189 FGF6P10767 208 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms