RNA–Protein interactions for RNA: ENST00000496116.1

CMSS1-208, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 1 (best)

Gene CMSS1, Length 2,145 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-208ENST00000496116 MRPL16Q9NX20 251 aaKnown RBP8.05□□□□□ -1.12
CMSS1-208ENST00000496116 KMT2BQ9UMN6 2715 aaPredicted RBP8.05□□□□□ -1.12
CMSS1-208ENST00000496116 NACAE9PAV3 2078 aa8.04□□□□□ -1.12
CMSS1-208ENST00000496116 J3QQQ9 107 aa8.04□□□□□ -1.12
CMSS1-208ENST00000496116 RS1O15537 224 aa8.04□□□□□ -1.12
CMSS1-208ENST00000496116 AKAP9Q99996 3911 aa8.04□□□□□ -1.12
CMSS1-208ENST00000496116 FLNAP21333 2647 aaKnown RBP8.04□□□□□ -1.12
CMSS1-208ENST00000496116 A0A0J9YY99 117 aa8.03□□□□□ -1.12
CMSS1-208ENST00000496116 TMEM223A0PJW6 202 aa8.03□□□□□ -1.12
CMSS1-208ENST00000496116 LEPROTO15243 131 aa8.03□□□□□ -1.12
CMSS1-208ENST00000496116 ZNF418Q8TF45 676 aaPredicted RBP8.03□□□□□ -1.12
CMSS1-208ENST00000496116 SPANXB1Q9NS25 103 aaPredicted RBP8.03□□□□□ -1.12
CMSS1-208ENST00000496116 IGHV3OR16-12A0A075B7B8 117 aa8.03□□□□□ -1.12
CMSS1-208ENST00000496116 SAP30O75446 220 aa8.03□□□□□ -1.12
CMSS1-208ENST00000496116 RNF151Q2KHN1 245 aa8.03□□□□□ -1.12
CMSS1-208ENST00000496116 AMELXQ99217 191 aa8.03□□□□□ -1.12
CMSS1-208ENST00000496116 SPANXA1Q9NS26 97 aa8.03□□□□□ -1.12
CMSS1-208ENST00000496116 CCDC168Q8NDH2 2452 aa8.03□□□□□ -1.12
CMSS1-208ENST00000496116 ZNF22P17026 224 aaPredicted RBP8.02□□□□□ -1.13
CMSS1-208ENST00000496116 TSPEAR-AS2P59090 65 aa8.02□□□□□ -1.13
CMSS1-208ENST00000496116 COTL1Q14019 142 aa8.02□□□□□ -1.13
CMSS1-208ENST00000496116 RRN3P1Q2M238 152 aa8.02□□□□□ -1.13
CMSS1-208ENST00000496116 Q6ZSN1 163 aa8.02□□□□□ -1.13
CMSS1-208ENST00000496116 C1orf158Q8N1D5 194 aa8.02□□□□□ -1.13
CMSS1-208ENST00000496116 A0A0J9YXV3 536 aa8.02□□□□□ -1.13
CMSS1-208ENST00000496116 AZU1P20160 251 aa8.02□□□□□ -1.13
CMSS1-208ENST00000496116 SLC25A29Q8N8R3 303 aa8.02□□□□□ -1.13
CMSS1-208ENST00000496116 CHCHD7Q9BUK0 85 aa8.02□□□□□ -1.13
CMSS1-208ENST00000496116 WNK1Q9H4A3 2382 aa8.01□□□□□ -1.13
CMSS1-208ENST00000496116 MRPS36P82909 103 aaKnown RBP8.01□□□□□ -1.13
CMSS1-208ENST00000496116 IL17DQ8TAD2 202 aa8.01□□□□□ -1.13
CMSS1-208ENST00000496116 TRGV1A0A0A0MS02 117 aa8□□□□□ -1.13
CMSS1-208ENST00000496116 HILS1P60008 231 aa8□□□□□ -1.13
CMSS1-208ENST00000496116 TMEM263Q8WUH6 116 aaKnown RBP8□□□□□ -1.13
CMSS1-208ENST00000496116 FAM110AQ9BQ89 295 aa8□□□□□ -1.13
CMSS1-208ENST00000496116 UBE2D4Q9Y2X8 147 aa8□□□□□ -1.13
CMSS1-208ENST00000496116 CHD6Q8TD26 2715 aa8□□□□□ -1.13
CMSS1-208ENST00000496116 UBE2D1P51668 147 aa8□□□□□ -1.13
CMSS1-208ENST00000496116 VPS25Q9BRG1 176 aa8□□□□□ -1.13
CMSS1-208ENST00000496116 Q9UF83 564 aa8□□□□□ -1.13
CMSS1-208ENST00000496116 TENM4Q6N022 2769 aa7.99□□□□□ -1.13
CMSS1-208ENST00000496116 IGHV3-30P01768 117 aa7.99□□□□□ -1.13
CMSS1-208ENST00000496116 IGHV3-30-5P0DP03 117 aa7.99□□□□□ -1.13
CMSS1-208ENST00000496116 CEMP1Q6PRD7 247 aaPredicted RBP7.99□□□□□ -1.13
CMSS1-208ENST00000496116 PGPEP1Q9NXJ5 209 aa7.99□□□□□ -1.13
CMSS1-208ENST00000496116 IGHV3-64A0A075B6Q5 118 aa7.99□□□□□ -1.13
CMSS1-208ENST00000496116 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.99□□□□□ -1.13
CMSS1-208ENST00000496116 IGHV3-38A0A0C4DH36 116 aa7.99□□□□□ -1.13
CMSS1-208ENST00000496116 IGKV2-29A2NJV5 120 aaPredicted RBP7.99□□□□□ -1.13
CMSS1-208ENST00000496116 F8W1H4 67 aa7.99□□□□□ -1.13
CMSS1-208ENST00000496116 IGLV1-51P01701 117 aa7.99□□□□□ -1.13
CMSS1-208ENST00000496116 FAM104AQ969W3 186 aa7.99□□□□□ -1.13
CMSS1-208ENST00000496116 TIMM21Q9BVV7 248 aa7.99□□□□□ -1.13
CMSS1-208ENST00000496116 TINCRA0A1B0GVN0 87 aa7.98□□□□□ -1.13
CMSS1-208ENST00000496116 NDUFA7O95182 113 aa7.98□□□□□ -1.13
CMSS1-208ENST00000496116 PDZD2O15018 2839 aa7.97□□□□□ -1.13
CMSS1-208ENST00000496116 TRAV4A0A0B4J268 109 aa7.97□□□□□ -1.13
CMSS1-208ENST00000496116 TRBV10-1A0A0K0K1A3 114 aa7.97□□□□□ -1.13
CMSS1-208ENST00000496116 TMEM238C9JI98 176 aa7.97□□□□□ -1.13
CMSS1-208ENST00000496116 APOMO95445 188 aa7.97□□□□□ -1.13
CMSS1-208ENST00000496116 PCP4P48539 62 aa7.97□□□□□ -1.13
CMSS1-208ENST00000496116 RPL36AP83881 106 aaKnown RBP7.97□□□□□ -1.13
CMSS1-208ENST00000496116 RPL36ALQ969Q0 106 aaKnown RBP7.97□□□□□ -1.13
CMSS1-208ENST00000496116 C1QTNF4Q9BXJ3 329 aa7.97□□□□□ -1.13
CMSS1-208ENST00000496116 CUBNO60494 3623 aa7.97□□□□□ -1.13
CMSS1-208ENST00000496116 K7EQD1 137 aa7.97□□□□□ -1.13
CMSS1-208ENST00000496116 IGHV3-30-3P0DP02 117 aa7.97□□□□□ -1.13
CMSS1-208ENST00000496116 RNASE13Q5GAN3 156 aaKnown RBP7.97□□□□□ -1.13
CMSS1-208ENST00000496116 LYRM7Q5U5X0 104 aa7.97□□□□□ -1.13
CMSS1-208ENST00000496116 DGAT2L7PQ6IED9 249 aa7.97□□□□□ -1.13
CMSS1-208ENST00000496116 NDUFA11Q86Y39 141 aa7.97□□□□□ -1.13
CMSS1-208ENST00000496116 C16orf74Q96GX8 76 aa7.97□□□□□ -1.13
CMSS1-208ENST00000496116 IGHV1-58A0A0C4DH39 117 aa7.96□□□□□ -1.13
CMSS1-208ENST00000496116 G3V4G9 280 aa7.96□□□□□ -1.13
CMSS1-208ENST00000496116 H3BMG7 143 aa7.96□□□□□ -1.13
CMSS1-208ENST00000496116 DAZ2Q13117 558 aaKnown RBP7.96□□□□□ -1.13
CMSS1-208ENST00000496116 RPL24P83731 157 aaKnown RBP7.96□□□□□ -1.14
CMSS1-208ENST00000496116 Q6ZTI0 123 aa7.96□□□□□ -1.14
CMSS1-208ENST00000496116 Q6ZUT4 128 aa7.96□□□□□ -1.14
CMSS1-208ENST00000496116 DAZ4Q86SG3 579 aaKnown RBP7.96□□□□□ -1.14
CMSS1-208ENST00000496116 GEMIN7Q9H840 131 aaKnown RBP7.96□□□□□ -1.14
CMSS1-208ENST00000496116 DAZ3Q9NR90 486 aaKnown RBP7.96□□□□□ -1.14
CMSS1-208ENST00000496116 NF1P21359 2839 aa7.95□□□□□ -1.14
CMSS1-208ENST00000496116 TSPAN13O95857 204 aa7.95□□□□□ -1.14
CMSS1-208ENST00000496116 NOP10Q9NPE3 64 aaKnown RBP7.95□□□□□ -1.14
CMSS1-208ENST00000496116 ADARB2-AS1A8MUL3 147 aa7.94□□□□□ -1.14
CMSS1-208ENST00000496116 CFC1BP0CG36 223 aa7.94□□□□□ -1.14
CMSS1-208ENST00000496116 CFC1P0CG37 223 aa7.94□□□□□ -1.14
CMSS1-208ENST00000496116 RPL35AP18077 110 aaKnown RBP7.94□□□□□ -1.14
CMSS1-208ENST00000496116 SMAGPQ0VAQ4 97 aa7.94□□□□□ -1.14
CMSS1-208ENST00000496116 GAGE13Q4V321 117 aa7.94□□□□□ -1.14
CMSS1-208ENST00000496116 ACANP16112 2415 aa7.94□□□□□ -1.14
CMSS1-208ENST00000496116 LOC107984156A0A0G2JMH3 177 aa7.94□□□□□ -1.14
CMSS1-208ENST00000496116 A0A0J9YXY3 114 aa7.94□□□□□ -1.14
CMSS1-208ENST00000496116 CIDEAO60543 219 aa7.94□□□□□ -1.14
CMSS1-208ENST00000496116 GIG44P09565 113 aaPredicted RBP7.94□□□□□ -1.14
CMSS1-208ENST00000496116 ARL17AQ8IVW1 177 aa7.94□□□□□ -1.14
CMSS1-208ENST00000496116 C10orf126Q8N4M7 172 aa7.94□□□□□ -1.14
CMSS1-208ENST00000496116 WFDC10AQ9H1F0 79 aa7.94□□□□□ -1.14
CMSS1-208ENST00000496116 C19orf73Q9NVV2 129 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms