RNA–Protein interactions for RNA: ENST00000495953.2

RAPGEF3-215, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 3

Gene RAPGEF3, Length 648 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-215ENST00000495953 ALKBH7Q9BT30 221 aaPredicted RBP10.6□□□□□ -0.71
RAPGEF3-215ENST00000495953 SMIM2Q9BVW6 85 aa10.6□□□□□ -0.71
RAPGEF3-215ENST00000495953 MAP1LC3AQ9H492 121 aa10.6□□□□□ -0.71
RAPGEF3-215ENST00000495953 VPS13DQ5THJ4 4388 aa10.59□□□□□ -0.71
RAPGEF3-215ENST00000495953 IGHV1-24A0A0C4DH33 117 aa10.59□□□□□ -0.71
RAPGEF3-215ENST00000495953 SIVA1O15304 175 aa10.59□□□□□ -0.71
RAPGEF3-215ENST00000495953 NTM-AS1Q6ZSK4 140 aa10.59□□□□□ -0.71
RAPGEF3-215ENST00000495953 Q9H8V8 135 aa10.59□□□□□ -0.71
RAPGEF3-215ENST00000495953 K7EP13 123 aa10.58□□□□□ -0.72
RAPGEF3-215ENST00000495953 RAB5AP20339 215 aa10.58□□□□□ -0.72
RAPGEF3-215ENST00000495953 KMT2AQ03164 3969 aa10.57□□□□□ -0.72
RAPGEF3-215ENST00000495953 AMTP48728 403 aa10.57□□□□□ -0.72
RAPGEF3-215ENST00000495953 CHCHD7Q9BUK0 85 aa10.57□□□□□ -0.72
RAPGEF3-215ENST00000495953 NXT2Q9NPJ8 142 aaKnown RBP10.57□□□□□ -0.72
RAPGEF3-215ENST00000495953 K7EMI3 77 aa10.56□□□□□ -0.72
RAPGEF3-215ENST00000495953 TSHBP01222 138 aa10.56□□□□□ -0.72
RAPGEF3-215ENST00000495953 DNAH10OSP0CZ25 163 aa10.56□□□□□ -0.72
RAPGEF3-215ENST00000495953 FCER1GP30273 86 aa10.56□□□□□ -0.72
RAPGEF3-215ENST00000495953 WFDC10BQ8IUB3 73 aa10.56□□□□□ -0.72
RAPGEF3-215ENST00000495953 Q8N8P6 123 aa10.56□□□□□ -0.72
RAPGEF3-215ENST00000495953 TMEM243Q9BU79 118 aa10.56□□□□□ -0.72
RAPGEF3-215ENST00000495953 TRAV9-2A0A087WT02 112 aa10.55□□□□□ -0.72
RAPGEF3-215ENST00000495953 H7C423 109 aa10.55□□□□□ -0.72
RAPGEF3-215ENST00000495953 LINC01556Q5JQF7 62 aa10.55□□□□□ -0.72
RAPGEF3-215ENST00000495953 CHCHD5Q9BSY4 110 aa10.55□□□□□ -0.72
RAPGEF3-215ENST00000495953 IGLV2-18A0A075B6J9 118 aa10.54□□□□□ -0.72
RAPGEF3-215ENST00000495953 LOC389332A0A1B0GUA5 103 aa10.54□□□□□ -0.72
RAPGEF3-215ENST00000495953 ESDP10768 282 aa10.54□□□□□ -0.72
RAPGEF3-215ENST00000495953 TTC32Q5I0X7 151 aa10.54□□□□□ -0.72
RAPGEF3-215ENST00000495953 NIT1Q86X76 327 aa10.54□□□□□ -0.72
RAPGEF3-215ENST00000495953 UBE2L6O14933 153 aa10.53□□□□□ -0.72
RAPGEF3-215ENST00000495953 TRGC2P03986 189 aa10.53□□□□□ -0.72
RAPGEF3-215ENST00000495953 SMAGPQ0VAQ4 97 aa10.53□□□□□ -0.72
RAPGEF3-215ENST00000495953 C10orf126Q8N4M7 172 aa10.53□□□□□ -0.72
RAPGEF3-215ENST00000495953 PRSS3P2Q8NHM4 247 aa10.53□□□□□ -0.72
RAPGEF3-215ENST00000495953 TMEM18Q96B42 140 aa10.53□□□□□ -0.72
RAPGEF3-215ENST00000495953 DNAH6Q9C0G6 4158 aa10.52□□□□□ -0.73
RAPGEF3-215ENST00000495953 A0A087WX48 190 aa10.52□□□□□ -0.73
RAPGEF3-215ENST00000495953 TMEM262E9PQX1 116 aa10.52□□□□□ -0.73
RAPGEF3-215ENST00000495953 DNAH10Q8IVF4 4471 aa10.51□□□□□ -0.73
RAPGEF3-215ENST00000495953 NBDYA0A0U1RRE5 68 aa10.51□□□□□ -0.73
RAPGEF3-215ENST00000495953 A0A1B0GUV1 79 aa10.51□□□□□ -0.73
RAPGEF3-215ENST00000495953 G0S2P27469 103 aa10.51□□□□□ -0.73
RAPGEF3-215ENST00000495953 IFI27P40305 119 aaPredicted RBP10.51□□□□□ -0.73
RAPGEF3-215ENST00000495953 ORMDL2Q53FV1 153 aa10.51□□□□□ -0.73
RAPGEF3-215ENST00000495953 C18orf32Q8TCD1 76 aa10.51□□□□□ -0.73
RAPGEF3-215ENST00000495953 DEFB104AQ8WTQ1 72 aa10.51□□□□□ -0.73
RAPGEF3-215ENST00000495953 LINC01546A6NGU7 62 aa10.5□□□□□ -0.73
RAPGEF3-215ENST00000495953 BTF3P20290 206 aaKnown RBP10.5□□□□□ -0.73
RAPGEF3-215ENST00000495953 RAB5BP61020 215 aa10.5□□□□□ -0.73
RAPGEF3-215ENST00000495953 LAGE3Q14657 143 aa10.5□□□□□ -0.73
RAPGEF3-215ENST00000495953 C20orf203Q8NBC4 194 aa10.5□□□□□ -0.73
RAPGEF3-215ENST00000495953 IGHV3-30P01768 117 aa10.49□□□□□ -0.73
RAPGEF3-215ENST00000495953 IGHV3-33P01772 117 aa10.49□□□□□ -0.73
RAPGEF3-215ENST00000495953 IGHV3-30-3P0DP02 117 aa10.49□□□□□ -0.73
RAPGEF3-215ENST00000495953 IGHV3-30-5P0DP03 117 aa10.49□□□□□ -0.73
RAPGEF3-215ENST00000495953 ZNF25P17030 456 aaPredicted RBP10.49□□□□□ -0.73
RAPGEF3-215ENST00000495953 GAGE6Q13070 117 aa10.49□□□□□ -0.73
RAPGEF3-215ENST00000495953 FA2HQ7L5A8 372 aa10.49□□□□□ -0.73
RAPGEF3-215ENST00000495953 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.48□□□□□ -0.73
RAPGEF3-215ENST00000495953 IGKV2-29A2NJV5 120 aaPredicted RBP10.48□□□□□ -0.73
RAPGEF3-215ENST00000495953 LINC01549A6NIU2 74 aa10.48□□□□□ -0.73
RAPGEF3-215ENST00000495953 MPV17L2Q567V2 206 aa10.48□□□□□ -0.73
RAPGEF3-215ENST00000495953 AMMECR1LQ6DCA0 310 aa10.48□□□□□ -0.73
RAPGEF3-215ENST00000495953 Q6ZR54 194 aa10.48□□□□□ -0.73
RAPGEF3-215ENST00000495953 MRPL52Q86TS9 123 aaKnown RBP10.48□□□□□ -0.73
RAPGEF3-215ENST00000495953 TIMM21Q9BVV7 248 aa10.48□□□□□ -0.73
RAPGEF3-215ENST00000495953 FRAS1Q86XX4 4008 aa10.48□□□□□ -0.73
RAPGEF3-215ENST00000495953 FGF6P10767 208 aa10.47□□□□□ -0.73
RAPGEF3-215ENST00000495953 RBX1P62877 108 aa10.47□□□□□ -0.73
RAPGEF3-215ENST00000495953 Q0VG73 95 aa10.47□□□□□ -0.73
RAPGEF3-215ENST00000495953 TMEM101Q96IK0 257 aa10.47□□□□□ -0.73
RAPGEF3-215ENST00000495953 CSDC2Q9Y534 153 aaKnown RBP10.47□□□□□ -0.73
RAPGEF3-215ENST00000495953 IBA57-AS1B1ANH7 110 aa10.46□□□□□ -0.73
RAPGEF3-215ENST00000495953 LINC00614P0C842 121 aa10.46□□□□□ -0.73
RAPGEF3-215ENST00000495953 AP5S1Q9NUS5 200 aa10.46□□□□□ -0.73
RAPGEF3-215ENST00000495953 ANGP03950 147 aaKnown RBP10.45□□□□□ -0.74
RAPGEF3-215ENST00000495953 RNASEKQ6P5S7 137 aaKnown RBP10.45□□□□□ -0.74
RAPGEF3-215ENST00000495953 Q8N976 141 aa10.45□□□□□ -0.74
RAPGEF3-215ENST00000495953 SPANXA1Q9NS26 97 aa10.45□□□□□ -0.74
RAPGEF3-215ENST00000495953 CYSLTR1Q9Y271 337 aa10.45□□□□□ -0.74
RAPGEF3-215ENST00000495953 TRAV8-3A0A0A6YYJ7 113 aa10.44□□□□□ -0.74
RAPGEF3-215ENST00000495953 M0R2N4 97 aa10.44□□□□□ -0.74
RAPGEF3-215ENST00000495953 DGAT2L7PQ6IED9 249 aa10.44□□□□□ -0.74
RAPGEF3-215ENST00000495953 BAGE3Q86Y29 109 aa10.44□□□□□ -0.74
RAPGEF3-215ENST00000495953 Q8N3U1 123 aa10.44□□□□□ -0.74
RAPGEF3-215ENST00000495953 OR5A1Q8NGJ0 315 aa10.44□□□□□ -0.74
RAPGEF3-215ENST00000495953 CHCHD1Q96BP2 118 aaKnown RBP10.44□□□□□ -0.74
RAPGEF3-215ENST00000495953 KLK12Q9UKR0 248 aa10.44□□□□□ -0.74
RAPGEF3-215ENST00000495953 UBE2D4Q9Y2X8 147 aa10.44□□□□□ -0.74
RAPGEF3-215ENST00000495953 NPSP0C0P6 89 aa10.43□□□□□ -0.74
RAPGEF3-215ENST00000495953 RPL39P62891 51 aaKnown RBP10.43□□□□□ -0.74
RAPGEF3-215ENST00000495953 C2orf66Q6UXQ4 117 aa10.43□□□□□ -0.74
RAPGEF3-215ENST00000495953 NFE4Q86UQ8 179 aa10.43□□□□□ -0.74
RAPGEF3-215ENST00000495953 URB1-AS1Q96HZ7 61 aa10.43□□□□□ -0.74
RAPGEF3-215ENST00000495953 KRTAP1-5Q9BYS1 174 aa10.43□□□□□ -0.74
RAPGEF3-215ENST00000495953 PYGO1Q9Y3Y4 419 aa10.43□□□□□ -0.74
RAPGEF3-215ENST00000495953 IGLV4-60A0A075B6I1 120 aa10.42□□□□□ -0.74
RAPGEF3-215ENST00000495953 C1orf196B1AJZ1 125 aa10.42□□□□□ -0.74
RAPGEF3-215ENST00000495953 TOMM6Q96B49 74 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms