RNA–Protein interactions for RNA: ENST00000494674.1

PRPF4B-209, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 5

Gene PRPF4B, Length 1,727 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-209ENST00000494674 WFDC9Q8NEX5 89 aa7.59□□□□□ -1.19
PRPF4B-209ENST00000494674 OR4C5Q8NGB2 326 aa7.59□□□□□ -1.19
PRPF4B-209ENST00000494674 DNAJC30Q96LL9 226 aa7.59□□□□□ -1.19
PRPF4B-209ENST00000494674 TNFRSF18Q9Y5U5 241 aa7.59□□□□□ -1.19
PRPF4B-209ENST00000494674 PKD1L1Q8TDX9 2849 aa7.59□□□□□ -1.2
PRPF4B-209ENST00000494674 CYSRT1A8MQ03 144 aa7.58□□□□□ -1.2
PRPF4B-209ENST00000494674 WIPF1O43516 503 aa7.58□□□□□ -1.2
PRPF4B-209ENST00000494674 PMVKQ15126 192 aa7.58□□□□□ -1.2
PRPF4B-209ENST00000494674 MPV17L2Q567V2 206 aa7.58□□□□□ -1.2
PRPF4B-209ENST00000494674 LURAP1LQ8IV03 231 aa7.58□□□□□ -1.2
PRPF4B-209ENST00000494674 OPRPNQ99935 248 aaPredicted RBP7.58□□□□□ -1.2
PRPF4B-209ENST00000494674 CHCHD7Q9BUK0 85 aa7.58□□□□□ -1.2
PRPF4B-209ENST00000494674 TTTY13Q9BZ97 58 aa7.58□□□□□ -1.2
PRPF4B-209ENST00000494674 CST9LQ9H4G1 147 aa7.58□□□□□ -1.2
PRPF4B-209ENST00000494674 STAB1Q9NY15 2570 aa7.58□□□□□ -1.2
PRPF4B-209ENST00000494674 RRN3P1Q2M238 152 aa7.58□□□□□ -1.2
PRPF4B-209ENST00000494674 KRTAP24-1Q3LI83 254 aa7.58□□□□□ -1.2
PRPF4B-209ENST00000494674 C11orf86A6NJI1 115 aa7.57□□□□□ -1.2
PRPF4B-209ENST00000494674 COL5A1-AS1Q5SY13 56 aa7.57□□□□□ -1.2
PRPF4B-209ENST00000494674 BVES-AS1Q5T3Y7 98 aa7.57□□□□□ -1.2
PRPF4B-209ENST00000494674 KRTAP9-2Q9BYQ4 174 aa7.57□□□□□ -1.2
PRPF4B-209ENST00000494674 X6R8D5 127 aa7.57□□□□□ -1.2
PRPF4B-209ENST00000494674 IGLV4-3A0A075B6K6 122 aa7.56□□□□□ -1.2
PRPF4B-209ENST00000494674 K7EQD1 137 aa7.56□□□□□ -1.2
PRPF4B-209ENST00000494674 SIVA1O15304 175 aa7.56□□□□□ -1.2
PRPF4B-209ENST00000494674 LCE2AQ5TA79 106 aaPredicted RBP7.56□□□□□ -1.2
PRPF4B-209ENST00000494674 PYGO1Q9Y3Y4 419 aa7.56□□□□□ -1.2
PRPF4B-209ENST00000494674 IGHV3-38A0A0C4DH36 116 aa7.55□□□□□ -1.2
PRPF4B-209ENST00000494674 TRBV10-1A0A0K0K1A3 114 aa7.55□□□□□ -1.2
PRPF4B-209ENST00000494674 GAGE12BA1L429 117 aa7.55□□□□□ -1.2
PRPF4B-209ENST00000494674 GAGE7O76087 117 aa7.55□□□□□ -1.2
PRPF4B-209ENST00000494674 GAGE12FP0CL80 117 aa7.55□□□□□ -1.2
PRPF4B-209ENST00000494674 GAGE12GP0CL81 117 aa7.55□□□□□ -1.2
PRPF4B-209ENST00000494674 GAGE12IP0CL82 117 aa7.55□□□□□ -1.2
PRPF4B-209ENST00000494674 LINC00612Q8N6U2 182 aa7.55□□□□□ -1.2
PRPF4B-209ENST00000494674 MAPKAPK5-AS1Q8N8E1 139 aa7.55□□□□□ -1.2
PRPF4B-209ENST00000494674 SLC25A29Q8N8R3 303 aa7.55□□□□□ -1.2
PRPF4B-209ENST00000494674 ZNRF2Q8NHG8 242 aa7.55□□□□□ -1.2
PRPF4B-209ENST00000494674 PHLDA1Q8WV24 401 aaPredicted RBP7.55□□□□□ -1.2
PRPF4B-209ENST00000494674 DNAH3Q8TD57 4116 aa7.55□□□□□ -1.2
PRPF4B-209ENST00000494674 TRBV7-3A0A075B6L6 115 aa7.55□□□□□ -1.2
PRPF4B-209ENST00000494674 KRTAP9-6A0A140TA67 174 aa7.55□□□□□ -1.2
PRPF4B-209ENST00000494674 EMP1P54849 157 aa7.55□□□□□ -1.2
PRPF4B-209ENST00000494674 E9PLD3 99 aa7.54□□□□□ -1.2
PRPF4B-209ENST00000494674 UBE2D3P61077 147 aa7.54□□□□□ -1.2
PRPF4B-209ENST00000494674 UBE2D2P62837 147 aa7.54□□□□□ -1.2
PRPF4B-209ENST00000494674 CEMP1Q6PRD7 247 aaPredicted RBP7.54□□□□□ -1.2
PRPF4B-209ENST00000494674 C12orf54Q6X4T0 127 aa7.54□□□□□ -1.2
PRPF4B-209ENST00000494674 NFE4Q86UQ8 179 aa7.54□□□□□ -1.2
PRPF4B-209ENST00000494674 AMELXQ99217 191 aa7.54□□□□□ -1.2
PRPF4B-209ENST00000494674 HIGD1BQ9P298 99 aa7.54□□□□□ -1.2
PRPF4B-209ENST00000494674 UBE2D4Q9Y2X8 147 aa7.54□□□□□ -1.2
PRPF4B-209ENST00000494674 MAST4O15021 2626 aa7.54□□□□□ -1.2
PRPF4B-209ENST00000494674 NPSP0C0P6 89 aa7.53□□□□□ -1.2
PRPF4B-209ENST00000494674 COTL1Q14019 142 aa7.53□□□□□ -1.2
PRPF4B-209ENST00000494674 KIR2DL5BQ8NHK3 375 aa7.53□□□□□ -1.2
PRPF4B-209ENST00000494674 TRBV25-1A0A075B6N4 114 aa7.52□□□□□ -1.2
PRPF4B-209ENST00000494674 TRGV2A0A075B6R0 118 aa7.52□□□□□ -1.2
PRPF4B-209ENST00000494674 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.52□□□□□ -1.2
PRPF4B-209ENST00000494674 IGKV2-29A2NJV5 120 aaPredicted RBP7.52□□□□□ -1.2
PRPF4B-209ENST00000494674 HSD52Q0P140 79 aa7.52□□□□□ -1.2
PRPF4B-209ENST00000494674 FHL2Q14192 279 aa7.52□□□□□ -1.2
PRPF4B-209ENST00000494674 TMEM97Q5BJF2 176 aa7.52□□□□□ -1.2
PRPF4B-209ENST00000494674 PAPPA-AS1Q5QFB9 102 aa7.52□□□□□ -1.2
PRPF4B-209ENST00000494674 NTM-AS1Q6ZSK4 140 aa7.52□□□□□ -1.2
PRPF4B-209ENST00000494674 PRADC1Q9BSG0 188 aa7.52□□□□□ -1.2
PRPF4B-209ENST00000494674 SPANXA1Q9NS26 97 aa7.52□□□□□ -1.2
PRPF4B-209ENST00000494674 ZMAT5Q9UDW3 170 aaKnown RBP7.52□□□□□ -1.2
PRPF4B-209ENST00000494674 TRAV8-6A0A0B4J262 113 aa7.52□□□□□ -1.21
PRPF4B-209ENST00000494674 TRBV6-4A0A1B0GX49 114 aa7.52□□□□□ -1.21
PRPF4B-209ENST00000494674 SMIM9A6NGZ8 99 aa7.52□□□□□ -1.21
PRPF4B-209ENST00000494674 CIDEAO60543 219 aa7.52□□□□□ -1.21
PRPF4B-209ENST00000494674 LINC00694P0DN24 101 aa7.52□□□□□ -1.21
PRPF4B-209ENST00000494674 CRYBA4P53673 196 aa7.52□□□□□ -1.21
PRPF4B-209ENST00000494674 RPL36AP83881 106 aaKnown RBP7.52□□□□□ -1.21
PRPF4B-209ENST00000494674 Q6ZVH6 145 aa7.52□□□□□ -1.21
PRPF4B-209ENST00000494674 SBSPONQ8IVN8 264 aa7.52□□□□□ -1.21
PRPF4B-209ENST00000494674 RPL36ALQ969Q0 106 aaKnown RBP7.52□□□□□ -1.21
PRPF4B-209ENST00000494674 CHAC1Q9BUX1 264 aa7.52□□□□□ -1.21
PRPF4B-209ENST00000494674 LOC100131303A0A0U1RQF7 123 aa7.51□□□□□ -1.21
PRPF4B-209ENST00000494674 DAZ4Q86SG3 579 aaKnown RBP7.51□□□□□ -1.21
PRPF4B-209ENST00000494674 PRIMA1Q86XR5 153 aa7.51□□□□□ -1.21
PRPF4B-209ENST00000494674 OR11H2Q8NH07 326 aa7.51□□□□□ -1.21
PRPF4B-209ENST00000494674 VCX2Q9H322 139 aa7.51□□□□□ -1.21
PRPF4B-209ENST00000494674 DAZ3Q9NR90 486 aaKnown RBP7.51□□□□□ -1.21
PRPF4B-209ENST00000494674 A0A0J9YXV3 536 aa7.5□□□□□ -1.21
PRPF4B-209ENST00000494674 GAGE12JA6NER3 117 aa7.5□□□□□ -1.21
PRPF4B-209ENST00000494674 TSPEAR-AS2P59090 65 aa7.5□□□□□ -1.21
PRPF4B-209ENST00000494674 GAGE1Q13065 139 aa7.5□□□□□ -1.21
PRPF4B-209ENST00000494674 GAGE4Q13068 117 aa7.5□□□□□ -1.21
PRPF4B-209ENST00000494674 GAGE5Q13069 117 aa7.5□□□□□ -1.21
PRPF4B-209ENST00000494674 DEFB135Q30KP9 77 aa7.5□□□□□ -1.21
PRPF4B-209ENST00000494674 GAGE13Q4V321 117 aa7.5□□□□□ -1.21
PRPF4B-209ENST00000494674 Q6ZUT4 128 aa7.5□□□□□ -1.21
PRPF4B-209ENST00000494674 TIMM21Q9BVV7 248 aa7.5□□□□□ -1.21
PRPF4B-209ENST00000494674 TAX1BP3O14907 124 aa7.49□□□□□ -1.21
PRPF4B-209ENST00000494674 ZNF22P17026 224 aaPredicted RBP7.49□□□□□ -1.21
PRPF4B-209ENST00000494674 ZNF25P17030 456 aaPredicted RBP7.49□□□□□ -1.21
PRPF4B-209ENST00000494674 APOC4P55056 127 aa7.49□□□□□ -1.21
PRPF4B-209ENST00000494674 MRPS36P82909 103 aaKnown RBP7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms