RNA–Protein interactions for RNA: ENST00000494646.1

MSH5-218, Transcript of mutS homolog 5, humanhuman

TSL 4

Gene MSH5, Length 528 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-218ENST00000494646 RNASE7Q9H1E1 156 aaKnown RBP6.26□□□□□ -1.41
MSH5-218ENST00000494646 DMBT1Q9UGM3 2413 aaPredicted RBP6.26□□□□□ -1.41
MSH5-218ENST00000494646 IGHV1-24A0A0C4DH33 117 aa6.25□□□□□ -1.41
MSH5-218ENST00000494646 USP17L23D6RBM5 183 aa6.25□□□□□ -1.41
MSH5-218ENST00000494646 H7C1H1 209 aa6.25□□□□□ -1.41
MSH5-218ENST00000494646 K7EN84 100 aa6.25□□□□□ -1.41
MSH5-218ENST00000494646 TWIST1Q15672 202 aa6.25□□□□□ -1.41
MSH5-218ENST00000494646 RASL11AQ6T310 242 aa6.25□□□□□ -1.41
MSH5-218ENST00000494646 SCXQ7RTU7 201 aa6.25□□□□□ -1.41
MSH5-218ENST00000494646 C9orf62Q8N4C0 152 aa6.25□□□□□ -1.41
MSH5-218ENST00000494646 SMIM12Q96EX1 92 aa6.25□□□□□ -1.41
MSH5-218ENST00000494646 DPH3P1Q9H4G8 78 aa6.25□□□□□ -1.41
MSH5-218ENST00000494646 BIN3Q9NQY0 253 aa6.25□□□□□ -1.41
MSH5-218ENST00000494646 IGLV10-54A0A075B6I4 117 aa6.24□□□□□ -1.41
MSH5-218ENST00000494646 TRGC1P0CF51 173 aa6.24□□□□□ -1.41
MSH5-218ENST00000494646 PKIAP61925 76 aa6.24□□□□□ -1.41
MSH5-218ENST00000494646 MIAQ16674 131 aa6.24□□□□□ -1.41
MSH5-218ENST00000494646 IQCJQ1A5X6 159 aa6.24□□□□□ -1.41
MSH5-218ENST00000494646 C14orf177Q52M58 125 aa6.24□□□□□ -1.41
MSH5-218ENST00000494646 ALKAL2Q6UX46 152 aa6.24□□□□□ -1.41
MSH5-218ENST00000494646 NIT2Q9NQR4 276 aa6.24□□□□□ -1.41
MSH5-218ENST00000494646 IGLV4-60A0A075B6I1 120 aa6.23□□□□□ -1.41
MSH5-218ENST00000494646 PLA2G1BP04054 148 aaKnown RBP6.23□□□□□ -1.41
MSH5-218ENST00000494646 PRSS1P07477 247 aa6.23□□□□□ -1.41
MSH5-218ENST00000494646 CEBPGP53567 150 aa6.23□□□□□ -1.41
MSH5-218ENST00000494646 FOXA3P55318 350 aaPredicted RBP6.23□□□□□ -1.41
MSH5-218ENST00000494646 REG3AQ06141 175 aa6.23□□□□□ -1.41
MSH5-218ENST00000494646 KRTAP26-1Q6PEX3 210 aa6.23□□□□□ -1.41
MSH5-218ENST00000494646 AKAP14Q86UN6 197 aa6.23□□□□□ -1.41
MSH5-218ENST00000494646 C20orf203Q8NBC4 194 aa6.23□□□□□ -1.41
MSH5-218ENST00000494646 CIRBP-AS1Q8TBR5 109 aa6.23□□□□□ -1.41
MSH5-218ENST00000494646 CHAC1Q9BUX1 264 aa6.23□□□□□ -1.41
MSH5-218ENST00000494646 CTDSP1Q9GZU7 261 aa6.23□□□□□ -1.41
MSH5-218ENST00000494646 RPP21Q9H633 154 aaKnown RBP6.23□□□□□ -1.41
MSH5-218ENST00000494646 PRR34Q9NV39 138 aa6.23□□□□□ -1.41
MSH5-218ENST00000494646 TRAV26-2A0A0B4J265 109 aa6.22□□□□□ -1.41
MSH5-218ENST00000494646 GATCO43716 136 aaKnown RBP6.22□□□□□ -1.41
MSH5-218ENST00000494646 TAGLN2P37802 199 aaKnown RBP6.22□□□□□ -1.41
MSH5-218ENST00000494646 BLOC1S1P78537 153 aa6.22□□□□□ -1.41
MSH5-218ENST00000494646 GATD1Q8NB37 220 aa6.22□□□□□ -1.41
MSH5-218ENST00000494646 GTSF1Q8WW33 167 aa6.22□□□□□ -1.41
MSH5-218ENST00000494646 TMEM243Q9BU79 118 aa6.22□□□□□ -1.41
MSH5-218ENST00000494646 GFRA4Q9GZZ7 299 aa6.22□□□□□ -1.41
MSH5-218ENST00000494646 UBE2L6O14933 153 aa6.21□□□□□ -1.42
MSH5-218ENST00000494646 CTRLP40313 264 aa6.21□□□□□ -1.42
MSH5-218ENST00000494646 COTL1Q14019 142 aa6.21□□□□□ -1.42
MSH5-218ENST00000494646 RPL39LQ96EH5 51 aaKnown RBP6.21□□□□□ -1.42
MSH5-218ENST00000494646 PGLYRP4Q96LB8 373 aa6.21□□□□□ -1.42
MSH5-218ENST00000494646 IGKV3OR2-268A0A0C4DH90 116 aa6.2□□□□□ -1.42
MSH5-218ENST00000494646 A0A1B0GUV1 79 aa6.2□□□□□ -1.42
MSH5-218ENST00000494646 AMTP48728 403 aa6.2□□□□□ -1.42
MSH5-218ENST00000494646 CAMPP49913 170 aa6.2□□□□□ -1.42
MSH5-218ENST00000494646 C9orf163Q8N9P6 203 aa6.2□□□□□ -1.42
MSH5-218ENST00000494646 EIF5A2Q9GZV4 153 aaKnown RBP6.2□□□□□ -1.42
MSH5-218ENST00000494646 TRAV8-4A0A0B4J246 113 aa6.19□□□□□ -1.42
MSH5-218ENST00000494646 PCP4P48539 62 aa6.19□□□□□ -1.42
MSH5-218ENST00000494646 SMIM15Q7Z3B0 74 aa6.19□□□□□ -1.42
MSH5-218ENST00000494646 CNFNQ9BYD5 112 aa6.19□□□□□ -1.42
MSH5-218ENST00000494646 hDV102S1A0JD36 115 aa6.18□□□□□ -1.42
MSH5-218ENST00000494646 A8MWL6 223 aa6.18□□□□□ -1.42
MSH5-218ENST00000494646 TMEM250H0YL14 139 aa6.18□□□□□ -1.42
MSH5-218ENST00000494646 PANO1I0J062 215 aa6.18□□□□□ -1.42
MSH5-218ENST00000494646 RNASEKQ6P5S7 137 aaKnown RBP6.18□□□□□ -1.42
MSH5-218ENST00000494646 FAM231DQ6ZW35 169 aa6.18□□□□□ -1.42
MSH5-218ENST00000494646 LYPD6BQ8NI32 183 aa6.18□□□□□ -1.42
MSH5-218ENST00000494646 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.17□□□□□ -1.42
MSH5-218ENST00000494646 IGKV2-29A2NJV5 120 aaPredicted RBP6.17□□□□□ -1.42
MSH5-218ENST00000494646 GAGE12HA6NDE8 117 aa6.17□□□□□ -1.42
MSH5-218ENST00000494646 GAS8-AS1O95177 125 aa6.17□□□□□ -1.42
MSH5-218ENST00000494646 SLPIP03973 132 aa6.17□□□□□ -1.42
MSH5-218ENST00000494646 PMCHP20382 165 aa6.17□□□□□ -1.42
MSH5-218ENST00000494646 KRTAP10-4P60372 401 aaPredicted RBP6.17□□□□□ -1.42
MSH5-218ENST00000494646 AMMECR1LQ6DCA0 310 aa6.17□□□□□ -1.42
MSH5-218ENST00000494646 SDIM1Q6ZPB5 146 aa6.17□□□□□ -1.42
MSH5-218ENST00000494646 DPH3Q96FX2 82 aa6.17□□□□□ -1.42
MSH5-218ENST00000494646 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.17□□□□□ -1.42
MSH5-218ENST00000494646 HMCN2Q8NDA2 5059 aa6.17□□□□□ -1.42
MSH5-218ENST00000494646 A0A1B0GVG6 124 aa6.16□□□□□ -1.42
MSH5-218ENST00000494646 SDHAF1A6NFY7 115 aa6.16□□□□□ -1.42
MSH5-218ENST00000494646 ZNF727A8MUV8 499 aa6.16□□□□□ -1.42
MSH5-218ENST00000494646 LCE2BO14633 110 aa6.16□□□□□ -1.42
MSH5-218ENST00000494646 SMIM7Q9BQ49 75 aa6.16□□□□□ -1.42
MSH5-218ENST00000494646 KRTAP29-1A8MX34 341 aaPredicted RBP6.15□□□□□ -1.42
MSH5-218ENST00000494646 APCSP02743 223 aa6.15□□□□□ -1.42
MSH5-218ENST00000494646 SRP19P09132 144 aaKnown RBP6.15□□□□□ -1.42
MSH5-218ENST00000494646 FGF6P10767 208 aa6.15□□□□□ -1.42
MSH5-218ENST00000494646 TEX261Q6UWH6 196 aa6.15□□□□□ -1.42
MSH5-218ENST00000494646 LINC01551Q86U37 167 aa6.15□□□□□ -1.42
MSH5-218ENST00000494646 BORCS7Q96B45 105 aa6.15□□□□□ -1.42
MSH5-218ENST00000494646 FAM210AQ96ND0 272 aa6.15□□□□□ -1.42
MSH5-218ENST00000494646 UBR4Q5T4S7 5183 aa6.15□□□□□ -1.42
MSH5-218ENST00000494646 TNXBP22105 4242 aa6.14□□□□□ -1.43
MSH5-218ENST00000494646 A0A1B0GUT8 65 aa6.14□□□□□ -1.43
MSH5-218ENST00000494646 FAM231BA6NCW3 169 aa6.14□□□□□ -1.43
MSH5-218ENST00000494646 HIGD1CA8MV81 97 aa6.14□□□□□ -1.43
MSH5-218ENST00000494646 I3L3M4 83 aa6.14□□□□□ -1.43
MSH5-218ENST00000494646 NCR2O95944 276 aa6.14□□□□□ -1.43
MSH5-218ENST00000494646 RPL37AP61513 92 aaKnown RBP6.14□□□□□ -1.43
MSH5-218ENST00000494646 HIGD2BQ4VC39 106 aa6.14□□□□□ -1.43
MSH5-218ENST00000494646 TSKUQ8WUA8 353 aa6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 99.6 ms