RNA–Protein interactions for RNA: ENST00000494123.5

BRCA1-223, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,612 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-223ENST00000494123 LOC389332A0A1B0GUA5 103 aa9.93□□□□□ -0.82
BRCA1-223ENST00000494123 TMEM262E9PQX1 116 aa9.93□□□□□ -0.82
BRCA1-223ENST00000494123 UBE2L6O14933 153 aa9.93□□□□□ -0.82
BRCA1-223ENST00000494123 TMEM243Q9BU79 118 aa9.93□□□□□ -0.82
BRCA1-223ENST00000494123 TRAV9-2A0A087WT02 112 aa9.93□□□□□ -0.82
BRCA1-223ENST00000494123 A0A087WX48 190 aa9.93□□□□□ -0.82
BRCA1-223ENST00000494123 NBDYA0A0U1RRE5 68 aa9.93□□□□□ -0.82
BRCA1-223ENST00000494123 M0R2N4 97 aa9.93□□□□□ -0.82
BRCA1-223ENST00000494123 TSHBP01222 138 aa9.93□□□□□ -0.82
BRCA1-223ENST00000494123 DNAH10OSP0CZ25 163 aa9.93□□□□□ -0.82
BRCA1-223ENST00000494123 PKIAP61925 76 aa9.93□□□□□ -0.82
BRCA1-223ENST00000494123 TTC32Q5I0X7 151 aa9.93□□□□□ -0.82
BRCA1-223ENST00000494123 TCAPO15273 167 aa9.92□□□□□ -0.82
BRCA1-223ENST00000494123 IGHV3-30P01768 117 aa9.92□□□□□ -0.82
BRCA1-223ENST00000494123 IGHV3-33P01772 117 aa9.92□□□□□ -0.82
BRCA1-223ENST00000494123 IGHV3-30-3P0DP02 117 aa9.92□□□□□ -0.82
BRCA1-223ENST00000494123 IGHV3-30-5P0DP03 117 aa9.92□□□□□ -0.82
BRCA1-223ENST00000494123 GAGE6Q13070 117 aa9.92□□□□□ -0.82
BRCA1-223ENST00000494123 LINC01556Q5JQF7 62 aa9.92□□□□□ -0.82
BRCA1-223ENST00000494123 NIT1Q86X76 327 aa9.92□□□□□ -0.82
BRCA1-223ENST00000494123 ALKBH7Q9BT30 221 aaPredicted RBP9.92□□□□□ -0.82
BRCA1-223ENST00000494123 COLCA2A8K830 154 aa9.91□□□□□ -0.82
BRCA1-223ENST00000494123 RAB5AP20339 215 aa9.91□□□□□ -0.82
BRCA1-223ENST00000494123 PRSS47A8MTI9 375 aa9.9□□□□□ -0.82
BRCA1-223ENST00000494123 C10orf126Q8N4M7 172 aa9.9□□□□□ -0.82
BRCA1-223ENST00000494123 K7EP13 123 aa9.89□□□□□ -0.83
BRCA1-223ENST00000494123 Q8N8P6 123 aa9.89□□□□□ -0.83
BRCA1-223ENST00000494123 CHCHD7Q9BUK0 85 aa9.89□□□□□ -0.83
BRCA1-223ENST00000494123 NXT2Q9NPJ8 142 aaKnown RBP9.89□□□□□ -0.83
BRCA1-223ENST00000494123 VPS13DQ5THJ4 4388 aa9.89□□□□□ -0.83
BRCA1-223ENST00000494123 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.89□□□□□ -0.83
BRCA1-223ENST00000494123 IGKV2-29A2NJV5 120 aaPredicted RBP9.89□□□□□ -0.83
BRCA1-223ENST00000494123 Q8N3U1 123 aa9.89□□□□□ -0.83
BRCA1-223ENST00000494123 PRSS3P2Q8NHM4 247 aa9.89□□□□□ -0.83
BRCA1-223ENST00000494123 KMT2CQ8NEZ4 4911 aaKnown RBP9.89□□□□□ -0.83
BRCA1-223ENST00000494123 H7C423 109 aa9.88□□□□□ -0.83
BRCA1-223ENST00000494123 IFI27P40305 119 aaPredicted RBP9.88□□□□□ -0.83
BRCA1-223ENST00000494123 MPV17L2Q567V2 206 aa9.88□□□□□ -0.83
BRCA1-223ENST00000494123 AMMECR1LQ6DCA0 310 aa9.88□□□□□ -0.83
BRCA1-223ENST00000494123 DNAH1Q9P2D7 4330 aa9.87□□□□□ -0.83
BRCA1-223ENST00000494123 TRGC2P03986 189 aa9.87□□□□□ -0.83
BRCA1-223ENST00000494123 ESDP10768 282 aa9.87□□□□□ -0.83
BRCA1-223ENST00000494123 RNASEKQ6P5S7 137 aaKnown RBP9.87□□□□□ -0.83
BRCA1-223ENST00000494123 Q6ZR54 194 aa9.87□□□□□ -0.83
BRCA1-223ENST00000494123 Q8N976 141 aa9.87□□□□□ -0.83
BRCA1-223ENST00000494123 TMEM18Q96B42 140 aa9.87□□□□□ -0.83
BRCA1-223ENST00000494123 KRTAP1-5Q9BYS1 174 aa9.87□□□□□ -0.83
BRCA1-223ENST00000494123 RBX1P62877 108 aa9.86□□□□□ -0.83
BRCA1-223ENST00000494123 K7EMI3 77 aa9.85□□□□□ -0.83
BRCA1-223ENST00000494123 ANGP03950 147 aaKnown RBP9.85□□□□□ -0.83
BRCA1-223ENST00000494123 SMAGPQ0VAQ4 97 aa9.85□□□□□ -0.83
BRCA1-223ENST00000494123 KLK12Q9UKR0 248 aa9.85□□□□□ -0.83
BRCA1-223ENST00000494123 FGF6P10767 208 aa9.85□□□□□ -0.83
BRCA1-223ENST00000494123 LAGE3Q14657 143 aa9.85□□□□□ -0.83
BRCA1-223ENST00000494123 ORMDL2Q53FV1 153 aa9.85□□□□□ -0.83
BRCA1-223ENST00000494123 FA2HQ7L5A8 372 aa9.85□□□□□ -0.83
BRCA1-223ENST00000494123 C20orf203Q8NBC4 194 aa9.85□□□□□ -0.83
BRCA1-223ENST00000494123 C18orf32Q8TCD1 76 aa9.85□□□□□ -0.83
BRCA1-223ENST00000494123 TMEM101Q96IK0 257 aa9.85□□□□□ -0.83
BRCA1-223ENST00000494123 A0A1B0GUV1 79 aa9.84□□□□□ -0.83
BRCA1-223ENST00000494123 IBA57-AS1B1ANH7 110 aa9.84□□□□□ -0.83
BRCA1-223ENST00000494123 CRPP02741 224 aa9.84□□□□□ -0.83
BRCA1-223ENST00000494123 ZNF25P17030 456 aaPredicted RBP9.84□□□□□ -0.83
BRCA1-223ENST00000494123 DGAT2L7PQ6IED9 249 aa9.84□□□□□ -0.83
BRCA1-223ENST00000494123 C1orf134Q5TEV5 83 aa9.83□□□□□ -0.84
BRCA1-223ENST00000494123 C6orf223Q8N319 242 aa9.83□□□□□ -0.84
BRCA1-223ENST00000494123 SACSQ9NZJ4 4579 aa9.83□□□□□ -0.84
BRCA1-223ENST00000494123 IGLV4-60A0A075B6I1 120 aa9.82□□□□□ -0.84
BRCA1-223ENST00000494123 OR5A1Q8NGJ0 315 aa9.82□□□□□ -0.84
BRCA1-223ENST00000494123 UBE2WQ96B02 151 aa9.82□□□□□ -0.84
BRCA1-223ENST00000494123 Q9HAA7 133 aa9.82□□□□□ -0.84
BRCA1-223ENST00000494123 BTF3P20290 206 aaKnown RBP9.82□□□□□ -0.84
BRCA1-223ENST00000494123 G0S2P27469 103 aa9.82□□□□□ -0.84
BRCA1-223ENST00000494123 RAB5BP61020 215 aa9.82□□□□□ -0.84
BRCA1-223ENST00000494123 RPL39P62891 51 aaKnown RBP9.82□□□□□ -0.84
BRCA1-223ENST00000494123 MRPL52Q86TS9 123 aaKnown RBP9.82□□□□□ -0.84
BRCA1-223ENST00000494123 KMT2AQ03164 3969 aa9.82□□□□□ -0.84
BRCA1-223ENST00000494123 RYR2Q92736 4967 aa9.81□□□□□ -0.84
BRCA1-223ENST00000494123 TRAV8-3A0A0A6YYJ7 113 aa9.81□□□□□ -0.84
BRCA1-223ENST00000494123 CLPSL2Q6UWE3 100 aa9.81□□□□□ -0.84
BRCA1-223ENST00000494123 NFE4Q86UQ8 179 aa9.81□□□□□ -0.84
BRCA1-223ENST00000494123 LINC00269Q8N2A0 174 aa9.81□□□□□ -0.84
BRCA1-223ENST00000494123 AP5S1Q9NUS5 200 aa9.81□□□□□ -0.84
BRCA1-223ENST00000494123 CYSLTR1Q9Y271 337 aa9.81□□□□□ -0.84
BRCA1-223ENST00000494123 UBE2D4Q9Y2X8 147 aa9.81□□□□□ -0.84
BRCA1-223ENST00000494123 LINC00614P0C842 121 aa9.8□□□□□ -0.84
BRCA1-223ENST00000494123 Q0VG73 95 aa9.8□□□□□ -0.84
BRCA1-223ENST00000494123 C2orf66Q6UXQ4 117 aa9.8□□□□□ -0.84
BRCA1-223ENST00000494123 HYDINQ4G0P3 5121 aa9.8□□□□□ -0.84
BRCA1-223ENST00000494123 LINC01546A6NGU7 62 aa9.79□□□□□ -0.84
BRCA1-223ENST00000494123 REG3AQ06141 175 aa9.79□□□□□ -0.84
BRCA1-223ENST00000494123 BAGE3Q86Y29 109 aa9.79□□□□□ -0.84
BRCA1-223ENST00000494123 TIMM21Q9BVV7 248 aa9.79□□□□□ -0.84
BRCA1-223ENST00000494123 SPANXA1Q9NS26 97 aa9.79□□□□□ -0.84
BRCA1-223ENST00000494123 DNAH6Q9C0G6 4158 aa9.79□□□□□ -0.84
BRCA1-223ENST00000494123 RMI2Q96E14 147 aa9.78□□□□□ -0.84
BRCA1-223ENST00000494123 CSDC2Q9Y534 153 aaKnown RBP9.78□□□□□ -0.84
BRCA1-223ENST00000494123 IGKV3OR2-268A0A0C4DH90 116 aa9.78□□□□□ -0.84
BRCA1-223ENST00000494123 MIAQ16674 131 aa9.78□□□□□ -0.84
BRCA1-223ENST00000494123 ENHOQ6UWT2 76 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 89.3 ms