RNA–Protein interactions for RNA: ENST00000493711.1

SNX17-208, Transcript of sorting nexin 17, humanhuman

TSL 3

Gene SNX17, Length 583 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-208ENST00000493711 COTL1Q14019 142 aa8.61□□□□□ -1.03
SNX17-208ENST00000493711 KIAA1644Q3SXP7 199 aa8.61□□□□□ -1.03
SNX17-208ENST00000493711 NXT2Q9NPJ8 142 aaKnown RBP8.61□□□□□ -1.03
SNX17-208ENST00000493711 Q9UF83 564 aa8.61□□□□□ -1.03
SNX17-208ENST00000493711 GAS8-AS1O95177 125 aa8.6□□□□□ -1.03
SNX17-208ENST00000493711 TRGC2P03986 189 aa8.6□□□□□ -1.03
SNX17-208ENST00000493711 PKIAP61925 76 aa8.6□□□□□ -1.03
SNX17-208ENST00000493711 LELP1Q5T871 98 aa8.6□□□□□ -1.03
SNX17-208ENST00000493711 LYPD5Q6UWN5 251 aa8.6□□□□□ -1.03
SNX17-208ENST00000493711 SMIM2Q9BVW6 85 aa8.6□□□□□ -1.03
SNX17-208ENST00000493711 TRAV8-6A0A0B4J262 113 aa8.59□□□□□ -1.03
SNX17-208ENST00000493711 FCER1GP30273 86 aa8.59□□□□□ -1.03
SNX17-208ENST00000493711 RAB5BP61020 215 aa8.59□□□□□ -1.03
SNX17-208ENST00000493711 MRPS16Q9Y3D3 137 aaKnown RBP8.59□□□□□ -1.03
SNX17-208ENST00000493711 TRBV25-1A0A075B6N4 114 aa8.58□□□□□ -1.04
SNX17-208ENST00000493711 TRBV6-8A0A0A6YYG3 113 aa8.58□□□□□ -1.04
SNX17-208ENST00000493711 IGHV1-24A0A0C4DH33 117 aa8.58□□□□□ -1.04
SNX17-208ENST00000493711 G0S2P27469 103 aa8.58□□□□□ -1.04
SNX17-208ENST00000493711 ESRGQ1W209 222 aa8.58□□□□□ -1.04
SNX17-208ENST00000493711 Q8N8P6 123 aa8.58□□□□□ -1.04
SNX17-208ENST00000493711 PRSS3P2Q8NHM4 247 aa8.58□□□□□ -1.04
SNX17-208ENST00000493711 DYNC2H1Q8NCM8 4307 aaKnown RBP8.58□□□□□ -1.04
SNX17-208ENST00000493711 TENM2Q9NT68 2774 aa8.57□□□□□ -1.04
SNX17-208ENST00000493711 IGHV3-38A0A0C4DH36 116 aa8.57□□□□□ -1.04
SNX17-208ENST00000493711 AMTP48728 403 aa8.57□□□□□ -1.04
SNX17-208ENST00000493711 SMAGPQ0VAQ4 97 aa8.57□□□□□ -1.04
SNX17-208ENST00000493711 IQCJQ1A5X6 159 aa8.57□□□□□ -1.04
SNX17-208ENST00000493711 UBE2DNLQ8IWF7 75 aa8.57□□□□□ -1.04
SNX17-208ENST00000493711 UPK3BQ9BT76 320 aa8.57□□□□□ -1.04
SNX17-208ENST00000493711 LOC389332A0A1B0GUA5 103 aa8.56□□□□□ -1.04
SNX17-208ENST00000493711 LINC01549A6NIU2 74 aa8.56□□□□□ -1.04
SNX17-208ENST00000493711 C1orf196B1AJZ1 125 aa8.56□□□□□ -1.04
SNX17-208ENST00000493711 H7C423 109 aa8.56□□□□□ -1.04
SNX17-208ENST00000493711 TSHBP01222 138 aa8.56□□□□□ -1.04
SNX17-208ENST00000493711 ORMDL2Q53FV1 153 aa8.56□□□□□ -1.04
SNX17-208ENST00000493711 LGALS9CQ6DKI2 356 aa8.56□□□□□ -1.04
SNX17-208ENST00000493711 FA2HQ7L5A8 372 aa8.56□□□□□ -1.04
SNX17-208ENST00000493711 C18orf32Q8TCD1 76 aa8.56□□□□□ -1.04
SNX17-208ENST00000493711 TMEM18Q96B42 140 aa8.56□□□□□ -1.04
SNX17-208ENST00000493711 TMEM243Q9BU79 118 aa8.56□□□□□ -1.04
SNX17-208ENST00000493711 IGLV2-18A0A075B6J9 118 aa8.55□□□□□ -1.04
SNX17-208ENST00000493711 K7EP13 123 aa8.55□□□□□ -1.04
SNX17-208ENST00000493711 Q0VG73 95 aa8.55□□□□□ -1.04
SNX17-208ENST00000493711 KRTAP4-12Q9BQ66 201 aa8.55□□□□□ -1.04
SNX17-208ENST00000493711 CHCHD7Q9BUK0 85 aa8.55□□□□□ -1.04
SNX17-208ENST00000493711 LINC00588Q9Y4M8 146 aa8.55□□□□□ -1.04
SNX17-208ENST00000493711 NACAE9PAV3 2078 aa8.54□□□□□ -1.04
SNX17-208ENST00000493711 LINC01546A6NGU7 62 aa8.54□□□□□ -1.04
SNX17-208ENST00000493711 UBE2L6O14933 153 aa8.54□□□□□ -1.04
SNX17-208ENST00000493711 EIF4EBP3O60516 100 aaPredicted RBP8.54□□□□□ -1.04
SNX17-208ENST00000493711 IFI27P40305 119 aaPredicted RBP8.54□□□□□ -1.04
SNX17-208ENST00000493711 LAGE3Q14657 143 aa8.54□□□□□ -1.04
SNX17-208ENST00000493711 NTM-AS1Q6ZSK4 140 aa8.54□□□□□ -1.04
SNX17-208ENST00000493711 CHCHD5Q9BSY4 110 aa8.54□□□□□ -1.04
SNX17-208ENST00000493711 LINC00614P0C842 121 aa8.53□□□□□ -1.04
SNX17-208ENST00000493711 BAGE3Q86Y29 109 aa8.53□□□□□ -1.04
SNX17-208ENST00000493711 CHCHD1Q96BP2 118 aaKnown RBP8.53□□□□□ -1.04
SNX17-208ENST00000493711 AP5S1Q9NUS5 200 aa8.53□□□□□ -1.04
SNX17-208ENST00000493711 DNAH1Q9P2D7 4330 aa8.52□□□□□ -1.05
SNX17-208ENST00000493711 TRAV9-2A0A087WT02 112 aa8.52□□□□□ -1.05
SNX17-208ENST00000493711 SIVA1O15304 175 aa8.52□□□□□ -1.05
SNX17-208ENST00000493711 ESDP10768 282 aa8.52□□□□□ -1.05
SNX17-208ENST00000493711 NIT1Q86X76 327 aa8.52□□□□□ -1.05
SNX17-208ENST00000493711 A0A087WX48 190 aa8.51□□□□□ -1.05
SNX17-208ENST00000493711 ZNF25P17030 456 aaPredicted RBP8.51□□□□□ -1.05
SNX17-208ENST00000493711 LINC01556Q5JQF7 62 aa8.51□□□□□ -1.05
SNX17-208ENST00000493711 C20orf203Q8NBC4 194 aa8.51□□□□□ -1.05
SNX17-208ENST00000493711 Q9H8V8 135 aa8.51□□□□□ -1.05
SNX17-208ENST00000493711 A0A1B0GUV1 79 aa8.5□□□□□ -1.05
SNX17-208ENST00000493711 TMEM262E9PQX1 116 aa8.5□□□□□ -1.05
SNX17-208ENST00000493711 HIST1H2BKO60814 126 aa8.5□□□□□ -1.05
SNX17-208ENST00000493711 HIST1H2BJP06899 126 aa8.5□□□□□ -1.05
SNX17-208ENST00000493711 DNAH10OSP0CZ25 163 aa8.5□□□□□ -1.05
SNX17-208ENST00000493711 HIST1H2BOP23527 126 aa8.5□□□□□ -1.05
SNX17-208ENST00000493711 HIST1H2BBP33778 126 aa8.5□□□□□ -1.05
SNX17-208ENST00000493711 HIST1H2BDP58876 126 aa8.5□□□□□ -1.05
SNX17-208ENST00000493711 HIST1H2BCP62807 126 aa8.5□□□□□ -1.05
SNX17-208ENST00000493711 HIST2H2BEQ16778 126 aa8.5□□□□□ -1.05
SNX17-208ENST00000493711 TTC32Q5I0X7 151 aa8.5□□□□□ -1.05
SNX17-208ENST00000493711 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.5□□□□□ -1.05
SNX17-208ENST00000493711 AMMECR1LQ6DCA0 310 aa8.5□□□□□ -1.05
SNX17-208ENST00000493711 RNASEKQ6P5S7 137 aaKnown RBP8.5□□□□□ -1.05
SNX17-208ENST00000493711 MRPL52Q86TS9 123 aaKnown RBP8.5□□□□□ -1.05
SNX17-208ENST00000493711 C10orf126Q8N4M7 172 aa8.5□□□□□ -1.05
SNX17-208ENST00000493711 LINC00476Q8WZB0 136 aa8.5□□□□□ -1.05
SNX17-208ENST00000493711 HIST1H2BHQ93079 126 aa8.5□□□□□ -1.05
SNX17-208ENST00000493711 TMEM101Q96IK0 257 aa8.5□□□□□ -1.05
SNX17-208ENST00000493711 HIST1H2BNQ99877 126 aa8.5□□□□□ -1.05
SNX17-208ENST00000493711 HIST1H2BMQ99879 126 aa8.5□□□□□ -1.05
SNX17-208ENST00000493711 TIMM21Q9BVV7 248 aa8.5□□□□□ -1.05
SNX17-208ENST00000493711 SPANXA1Q9NS26 97 aa8.5□□□□□ -1.05
SNX17-208ENST00000493711 CYSLTR1Q9Y271 337 aa8.5□□□□□ -1.05
SNX17-208ENST00000493711 DNAH7Q8WXX0 4024 aa8.5□□□□□ -1.05
SNX17-208ENST00000493711 NPSP0C0P6 89 aa8.49□□□□□ -1.05
SNX17-208ENST00000493711 WFDC10BQ8IUB3 73 aa8.49□□□□□ -1.05
SNX17-208ENST00000493711 CSDC2Q9Y534 153 aaKnown RBP8.49□□□□□ -1.05
SNX17-208ENST00000493711 LYSTQ99698 3801 aa8.49□□□□□ -1.05
SNX17-208ENST00000493711 LY6G6CO95867 125 aa8.48□□□□□ -1.05
SNX17-208ENST00000493711 FGF6P10767 208 aa8.48□□□□□ -1.05
SNX17-208ENST00000493711 GAGE6Q13070 117 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 97.2 ms