RNA–Protein interactions for RNA: ENST00000493553.1

PRPF3-206, Transcript of pre-mRNA processing factor 3, humanhuman

TSL 2

Gene PRPF3, Length 516 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-206ENST00000493553 VPS13CQ709C8 3753 aa7.26□□□□□ -1.25
PRPF3-206ENST00000493553 TRAV4A0A0B4J268 109 aa7.25□□□□□ -1.25
PRPF3-206ENST00000493553 SPRY2O43597 315 aa7.25□□□□□ -1.25
PRPF3-206ENST00000493553 PMVKQ15126 192 aa7.25□□□□□ -1.25
PRPF3-206ENST00000493553 RRN3P1Q2M238 152 aa7.25□□□□□ -1.25
PRPF3-206ENST00000493553 C1orf158Q8N1D5 194 aa7.25□□□□□ -1.25
PRPF3-206ENST00000493553 C20orf203Q8NBC4 194 aa7.25□□□□□ -1.25
PRPF3-206ENST00000493553 OR4C5Q8NGB2 326 aa7.25□□□□□ -1.25
PRPF3-206ENST00000493553 RNASE8Q8TDE3 154 aaKnown RBP7.25□□□□□ -1.25
PRPF3-206ENST00000493553 MRPL35Q9NZE8 188 aaKnown RBP7.25□□□□□ -1.25
PRPF3-206ENST00000493553 HIGD1BQ9P298 99 aa7.25□□□□□ -1.25
PRPF3-206ENST00000493553 TP53TG1Q9Y2A0 90 aa7.25□□□□□ -1.25
PRPF3-206ENST00000493553 PYGO1Q9Y3Y4 419 aa7.25□□□□□ -1.25
PRPF3-206ENST00000493553 FN1P02751 2386 aaKnown RBP7.24□□□□□ -1.25
PRPF3-206ENST00000493553 SETXQ7Z333 2677 aaKnown RBP7.24□□□□□ -1.25
PRPF3-206ENST00000493553 IGIPA6NJ69 53 aa7.24□□□□□ -1.25
PRPF3-206ENST00000493553 AZU1P20160 251 aa7.24□□□□□ -1.25
PRPF3-206ENST00000493553 SEC11AP67812 179 aa7.24□□□□□ -1.25
PRPF3-206ENST00000493553 KIR2DL5BQ8NHK3 375 aa7.24□□□□□ -1.25
PRPF3-206ENST00000493553 CITED1Q99966 193 aa7.24□□□□□ -1.25
PRPF3-206ENST00000493553 SPANXA1Q9NS26 97 aa7.24□□□□□ -1.25
PRPF3-206ENST00000493553 FAM30AQ9NZY2 134 aa7.24□□□□□ -1.25
PRPF3-206ENST00000493553 HHLA3Q9XRX5 114 aa7.24□□□□□ -1.25
PRPF3-206ENST00000493553 NF1P21359 2839 aa7.23□□□□□ -1.25
PRPF3-206ENST00000493553 FLNBO75369 2602 aaKnown RBP7.23□□□□□ -1.25
PRPF3-206ENST00000493553 TRGV1A0A0A0MS02 117 aa7.23□□□□□ -1.25
PRPF3-206ENST00000493553 PRSS29PA6NIE9 313 aa7.23□□□□□ -1.25
PRPF3-206ENST00000493553 TSHBP01222 138 aa7.23□□□□□ -1.25
PRPF3-206ENST00000493553 RPL36AP83881 106 aaKnown RBP7.23□□□□□ -1.25
PRPF3-206ENST00000493553 HSD52Q0P140 79 aa7.23□□□□□ -1.25
PRPF3-206ENST00000493553 COTL1Q14019 142 aa7.23□□□□□ -1.25
PRPF3-206ENST00000493553 BAALCQ8WXS3 180 aa7.23□□□□□ -1.25
PRPF3-206ENST00000493553 RPL36ALQ969Q0 106 aaKnown RBP7.23□□□□□ -1.25
PRPF3-206ENST00000493553 OVOL2Q9BRP0 275 aa7.23□□□□□ -1.25
PRPF3-206ENST00000493553 CSMD2Q7Z408 3487 aa7.22□□□□□ -1.25
PRPF3-206ENST00000493553 IGHV3OR16-12A0A075B7B8 117 aa7.22□□□□□ -1.25
PRPF3-206ENST00000493553 NMUP48645 174 aa7.22□□□□□ -1.25
PRPF3-206ENST00000493553 APOC4P55056 127 aa7.22□□□□□ -1.25
PRPF3-206ENST00000493553 ZC2HC1BQ5TFG8 222 aa7.22□□□□□ -1.25
PRPF3-206ENST00000493553 DAZ4Q86SG3 579 aaKnown RBP7.22□□□□□ -1.25
PRPF3-206ENST00000493553 STPG4Q8N801 248 aa7.22□□□□□ -1.25
PRPF3-206ENST00000493553 WFDC9Q8NEX5 89 aa7.22□□□□□ -1.25
PRPF3-206ENST00000493553 OR11H2Q8NH07 326 aa7.22□□□□□ -1.25
PRPF3-206ENST00000493553 TIMM21Q9BVV7 248 aa7.22□□□□□ -1.25
PRPF3-206ENST00000493553 VCX2Q9H322 139 aa7.22□□□□□ -1.25
PRPF3-206ENST00000493553 DAZ3Q9NR90 486 aaKnown RBP7.22□□□□□ -1.25
PRPF3-206ENST00000493553 MRPL16Q9NX20 251 aaKnown RBP7.22□□□□□ -1.25
PRPF3-206ENST00000493553 NOTCH3Q9UM47 2321 aa7.21□□□□□ -1.26
PRPF3-206ENST00000493553 A6NDN8 102 aa7.21□□□□□ -1.26
PRPF3-206ENST00000493553 KRTAP10-3P60369 221 aa7.21□□□□□ -1.26
PRPF3-206ENST00000493553 BATFQ16520 125 aa7.21□□□□□ -1.26
PRPF3-206ENST00000493553 TAL2Q16559 108 aa7.21□□□□□ -1.26
PRPF3-206ENST00000493553 CST9LQ9H4G1 147 aa7.21□□□□□ -1.26
PRPF3-206ENST00000493553 JMJD1CQ15652 2540 aa7.2□□□□□ -1.26
PRPF3-206ENST00000493553 TRBV7-3A0A075B6L6 115 aa7.2□□□□□ -1.26
PRPF3-206ENST00000493553 TRBV6-4A0A1B0GX49 114 aa7.2□□□□□ -1.26
PRPF3-206ENST00000493553 FGF6P10767 208 aa7.2□□□□□ -1.26
PRPF3-206ENST00000493553 RPL35AP18077 110 aaKnown RBP7.2□□□□□ -1.26
PRPF3-206ENST00000493553 HINT1P49773 126 aaPredicted RBP7.2□□□□□ -1.26
PRPF3-206ENST00000493553 CSNK1G2-AS1Q8NCQ2 148 aa7.2□□□□□ -1.26
PRPF3-206ENST00000493553 HIVEP1P15822 2718 aa7.19□□□□□ -1.26
PRPF3-206ENST00000493553 TRGV2A0A075B6R0 118 aa7.19□□□□□ -1.26
PRPF3-206ENST00000493553 C11orf86A6NJI1 115 aa7.19□□□□□ -1.26
PRPF3-206ENST00000493553 E9PLD3 99 aa7.19□□□□□ -1.26
PRPF3-206ENST00000493553 H7C423 109 aa7.19□□□□□ -1.26
PRPF3-206ENST00000493553 K7EQD1 137 aa7.19□□□□□ -1.26
PRPF3-206ENST00000493553 GIG44P09565 113 aaPredicted RBP7.19□□□□□ -1.26
PRPF3-206ENST00000493553 MPV17L2Q567V2 206 aa7.19□□□□□ -1.26
PRPF3-206ENST00000493553 NEGR1Q7Z3B1 354 aa7.19□□□□□ -1.26
PRPF3-206ENST00000493553 NFE4Q86UQ8 179 aa7.19□□□□□ -1.26
PRPF3-206ENST00000493553 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP7.19□□□□□ -1.26
PRPF3-206ENST00000493553 LINC00476Q8WZB0 136 aa7.19□□□□□ -1.26
PRPF3-206ENST00000493553 KRTAP17-1Q9BYP8 105 aa7.19□□□□□ -1.26
PRPF3-206ENST00000493553 CSMD1Q96PZ7 3565 aa7.19□□□□□ -1.26
PRPF3-206ENST00000493553 F8P00451 2351 aa7.18□□□□□ -1.26
PRPF3-206ENST00000493553 A0A1B0GV90 55 aa7.18□□□□□ -1.26
PRPF3-206ENST00000493553 MRPS36P82909 103 aaKnown RBP7.18□□□□□ -1.26
PRPF3-206ENST00000493553 BVES-AS1Q5T3Y7 98 aa7.18□□□□□ -1.26
PRPF3-206ENST00000493553 HIST2H2BDQ6DRA6 164 aa7.18□□□□□ -1.26
PRPF3-206ENST00000493553 C2orf91Q6ZV80 131 aa7.18□□□□□ -1.26
PRPF3-206ENST00000493553 ORAOV1Q8WV07 137 aa7.18□□□□□ -1.26
PRPF3-206ENST00000493553 PRADC1Q9BSG0 188 aa7.18□□□□□ -1.26
PRPF3-206ENST00000493553 NOP10Q9NPE3 64 aaKnown RBP7.18□□□□□ -1.26
PRPF3-206ENST00000493553 OTOGQ6ZRI0 2925 aa7.18□□□□□ -1.26
PRPF3-206ENST00000493553 NBPF19A0A087WUL8 3843 aa7.17□□□□□ -1.26
PRPF3-206ENST00000493553 IGHV3-73A0A0B4J1V6 119 aa7.17□□□□□ -1.26
PRPF3-206ENST00000493553 LYRM9A8MSI8 78 aa7.17□□□□□ -1.26
PRPF3-206ENST00000493553 P0DMU3 169 aa7.17□□□□□ -1.26
PRPF3-206ENST00000493553 FAM231AP0DMU4 169 aa7.17□□□□□ -1.26
PRPF3-206ENST00000493553 FAM231CP0DMU5 169 aa7.17□□□□□ -1.26
PRPF3-206ENST00000493553 RPL39P62891 51 aaKnown RBP7.17□□□□□ -1.26
PRPF3-206ENST00000493553 GAGE1Q13065 139 aa7.17□□□□□ -1.26
PRPF3-206ENST00000493553 DGAT2L7PQ6IED9 249 aa7.17□□□□□ -1.26
PRPF3-206ENST00000493553 Q6ZTI0 123 aa7.17□□□□□ -1.26
PRPF3-206ENST00000493553 PLEKHB2Q96CS7 222 aa7.17□□□□□ -1.26
PRPF3-206ENST00000493553 GTSF1LQ9H1H1 148 aa7.17□□□□□ -1.26
PRPF3-206ENST00000493553 CSDC2Q9Y534 153 aaKnown RBP7.17□□□□□ -1.26
PRPF3-206ENST00000493553 MYMXA0A1B0GTQ4 84 aa7.16□□□□□ -1.26
PRPF3-206ENST00000493553 TEX48A0A1B0GUV7 120 aa7.16□□□□□ -1.26
PRPF3-206ENST00000493553 GCSHP23434 173 aa7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms