RNA–Protein interactions for RNA: ENST00000493430.5

PTCD3-218, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 782 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-218ENST00000493430 OR10G9Q8NGN4 311 aa1.81□□□□□ -2.12
PTCD3-218ENST00000493430 OR10AG1Q8NH19 301 aa1.81□□□□□ -2.12
PTCD3-218ENST00000493430 SCGB1C1Q8TD33 95 aa1.81□□□□□ -2.12
PTCD3-218ENST00000493430 S100ZQ8WXG8 99 aa1.81□□□□□ -2.12
PTCD3-218ENST00000493430 PGLYRP4Q96LB8 373 aa1.81□□□□□ -2.12
PTCD3-218ENST00000493430 HIST1H4GQ99525 98 aa1.81□□□□□ -2.12
PTCD3-218ENST00000493430 LINC00467Q9BRT7 94 aa1.81□□□□□ -2.12
PTCD3-218ENST00000493430 GGACTQ9BVM4 153 aa1.81□□□□□ -2.12
PTCD3-218ENST00000493430 MRPL32Q9BYC8 188 aaKnown RBP1.81□□□□□ -2.12
PTCD3-218ENST00000493430 ACTR3CQ9C0K3 210 aaPredicted RBP1.81□□□□□ -2.12
PTCD3-218ENST00000493430 MED28Q9H204 178 aa1.81□□□□□ -2.12
PTCD3-218ENST00000493430 PSG8Q9UQ74 426 aa1.81□□□□□ -2.12
PTCD3-218ENST00000493430 ICOSQ9Y6W8 199 aa1.81□□□□□ -2.12
PTCD3-218ENST00000493430 RAB19A4D1S5 217 aa1.8□□□□□ -2.12
PTCD3-218ENST00000493430 MAP1LC3B2A6NCE7 125 aa1.8□□□□□ -2.12
PTCD3-218ENST00000493430 LRCOL1A6NCL2 159 aa1.8□□□□□ -2.12
PTCD3-218ENST00000493430 M0R381 172 aa1.8□□□□□ -2.12
PTCD3-218ENST00000493430 PEX7O00628 323 aa1.8□□□□□ -2.12
PTCD3-218ENST00000493430 PPP1R2P9O14990 202 aa1.8□□□□□ -2.12
PTCD3-218ENST00000493430 IFNA5P01569 189 aa1.8□□□□□ -2.12
PTCD3-218ENST00000493430 IGLV2-8P01709 118 aa1.8□□□□□ -2.12
PTCD3-218ENST00000493430 CRYGDP07320 174 aa1.8□□□□□ -2.12
PTCD3-218ENST00000493430 LINC00694P0DN24 101 aa1.8□□□□□ -2.12
PTCD3-218ENST00000493430 SRIP30626 198 aa1.8□□□□□ -2.12
PTCD3-218ENST00000493430 NKX2-5P52952 324 aaPredicted RBP1.8□□□□□ -2.12
PTCD3-218ENST00000493430 TCTAP57738 103 aa1.8□□□□□ -2.12
PTCD3-218ENST00000493430 FLI1Q01543 452 aaPredicted RBP1.8□□□□□ -2.12
PTCD3-218ENST00000493430 SLAQ13239 276 aa1.8□□□□□ -2.12
PTCD3-218ENST00000493430 RAB31Q13636 194 aa1.8□□□□□ -2.12
PTCD3-218ENST00000493430 VAMP3Q15836 100 aa1.8□□□□□ -2.12
PTCD3-218ENST00000493430 PRR4Q16378 134 aa1.8□□□□□ -2.12
PTCD3-218ENST00000493430 OR10J3Q5JRS4 329 aa1.8□□□□□ -2.12
PTCD3-218ENST00000493430 Q6AWC8 147 aa1.8□□□□□ -2.12
PTCD3-218ENST00000493430 ZNF493Q6ZR52 646 aa1.8□□□□□ -2.12
PTCD3-218ENST00000493430 LINC00336Q6ZUF6 198 aa1.8□□□□□ -2.12
PTCD3-218ENST00000493430 NEGR1Q7Z3B1 354 aa1.8□□□□□ -2.12
PTCD3-218ENST00000493430 ZNF680Q8NEM1 530 aa1.8□□□□□ -2.12
PTCD3-218ENST00000493430 OR2G3Q8NGZ4 309 aa1.8□□□□□ -2.12
PTCD3-218ENST00000493430 FAM213BQ8TBF2 198 aa1.8□□□□□ -2.12
PTCD3-218ENST00000493430 DEDD2Q8WXF8 326 aa1.8□□□□□ -2.12
PTCD3-218ENST00000493430 ASB13Q8WXK3 278 aa1.8□□□□□ -2.12
PTCD3-218ENST00000493430 BAALCQ8WXS3 180 aa1.8□□□□□ -2.12
PTCD3-218ENST00000493430 AQP10Q96PS8 301 aa1.8□□□□□ -2.12
PTCD3-218ENST00000493430 ODF3Q96PU9 254 aa1.8□□□□□ -2.12
PTCD3-218ENST00000493430 ZNF471Q9BX82 626 aaPredicted RBP1.8□□□□□ -2.12
PTCD3-218ENST00000493430 MAP1LC3BQ9GZQ8 125 aa1.8□□□□□ -2.12
PTCD3-218ENST00000493430 OTORQ9NRC9 128 aa1.8□□□□□ -2.12
PTCD3-218ENST00000493430 TNFSF18Q9UNG2 199 aa1.8□□□□□ -2.12
PTCD3-218ENST00000493430 HHLA3Q9XRX5 114 aa1.8□□□□□ -2.12
PTCD3-218ENST00000493430 DMBT1Q9UGM3 2413 aaPredicted RBP1.8□□□□□ -2.12
PTCD3-218ENST00000493430 LRP1Q07954 4544 aaKnown RBP1.79□□□□□ -2.12
PTCD3-218ENST00000493430 IGLV10-54A0A075B6I4 117 aa1.79□□□□□ -2.12
PTCD3-218ENST00000493430 TRAV4A0A0B4J268 109 aa1.79□□□□□ -2.12
PTCD3-218ENST00000493430 CTXND1A0A1B0GTU2 59 aa1.79□□□□□ -2.12
PTCD3-218ENST00000493430 C17orf112F2Z3M2 114 aa1.79□□□□□ -2.12
PTCD3-218ENST00000493430 HSBP1O75506 76 aa1.79□□□□□ -2.12
PTCD3-218ENST00000493430 IFNA7P01567 189 aa1.79□□□□□ -2.12
PTCD3-218ENST00000493430 ORM1P02763 201 aa1.79□□□□□ -2.12
PTCD3-218ENST00000493430 MGPP08493 103 aa1.79□□□□□ -2.12
PTCD3-218ENST00000493430 ARMS2P0C7Q2 107 aa1.79□□□□□ -2.12
PTCD3-218ENST00000493430 CHTF8P0CG12 524 aa1.79□□□□□ -2.12
PTCD3-218ENST00000493430 CSN1S1P47710 185 aa1.79□□□□□ -2.12
PTCD3-218ENST00000493430 RAB5CP51148 216 aa1.79□□□□□ -2.12
PTCD3-218ENST00000493430 FOXA3P55318 350 aaPredicted RBP1.79□□□□□ -2.12
PTCD3-218ENST00000493430 PDE6HQ13956 83 aa1.79□□□□□ -2.12
PTCD3-218ENST00000493430 GUK1Q16774 197 aa1.79□□□□□ -2.12
PTCD3-218ENST00000493430 ATP6V1FQ16864 119 aa1.79□□□□□ -2.12
PTCD3-218ENST00000493430 ACOT6Q3I5F7 207 aaPredicted RBP1.79□□□□□ -2.12
PTCD3-218ENST00000493430 LGALSLQ3ZCW2 172 aaPredicted RBP1.79□□□□□ -2.12
PTCD3-218ENST00000493430 MPV17L2Q567V2 206 aa1.79□□□□□ -2.12
PTCD3-218ENST00000493430 IBA57Q5T440 356 aaKnown RBP1.79□□□□□ -2.12
PTCD3-218ENST00000493430 Q6ZN92 141 aa1.79□□□□□ -2.12
PTCD3-218ENST00000493430 CYB561D1Q8N8Q1 229 aa1.79□□□□□ -2.12
PTCD3-218ENST00000493430 Q8N976 141 aa1.79□□□□□ -2.12
PTCD3-218ENST00000493430 C5orf17Q8NAS9 161 aa1.79□□□□□ -2.12
PTCD3-218ENST00000493430 CMTM2Q8TAZ6 248 aa1.79□□□□□ -2.12
PTCD3-218ENST00000493430 CHCHD10Q8WYQ3 142 aaPredicted RBP1.79□□□□□ -2.12
PTCD3-218ENST00000493430 LINC00526Q96FQ7 95 aa1.79□□□□□ -2.12
PTCD3-218ENST00000493430 C20orf144Q9BQM9 153 aa1.79□□□□□ -2.12
PTCD3-218ENST00000493430 UPK3BQ9BT76 320 aa1.79□□□□□ -2.12
PTCD3-218ENST00000493430 PRO0255Q9UI72 69 aa1.79□□□□□ -2.12
PTCD3-218ENST00000493430 EPDR1Q9UM22 224 aa1.79□□□□□ -2.12
PTCD3-218ENST00000493430 PRELID1Q9Y255 219 aa1.79□□□□□ -2.12
PTCD3-218ENST00000493430 VPS13BQ7Z7G8 4022 aa1.78□□□□□ -2.12
PTCD3-218ENST00000493430 TRBV20OR9-2A0A075B6H5 130 aa1.78□□□□□ -2.12
PTCD3-218ENST00000493430 IGKV2-28A0A075B6P5 120 aa1.78□□□□□ -2.12
PTCD3-218ENST00000493430 IGKV2D-24A0A075B6R9 120 aa1.78□□□□□ -2.12
PTCD3-218ENST00000493430 TRAV26-2A0A0B4J265 109 aa1.78□□□□□ -2.12
PTCD3-218ENST00000493430 TRAV21A0A0B4J279 112 aa1.78□□□□□ -2.12
PTCD3-218ENST00000493430 IGKV3OR2-268A0A0C4DH90 116 aa1.78□□□□□ -2.12
PTCD3-218ENST00000493430 B4DEV8 164 aa1.78□□□□□ -2.12
PTCD3-218ENST00000493430 KRBOX1C9JBD0 128 aa1.78□□□□□ -2.12
PTCD3-218ENST00000493430 M0R2P5 195 aa1.78□□□□□ -2.12
PTCD3-218ENST00000493430 SNAPINO95295 136 aa1.78□□□□□ -2.12
PTCD3-218ENST00000493430 PTTG1O95997 202 aa1.78□□□□□ -2.12
PTCD3-218ENST00000493430 IGKV2D-28P01615 120 aa1.78□□□□□ -2.12
PTCD3-218ENST00000493430 HLA-DQA1P01909 254 aa1.78□□□□□ -2.12
PTCD3-218ENST00000493430 GIPP09681 153 aaPredicted RBP1.78□□□□□ -2.12
PTCD3-218ENST00000493430 INAFM2P0DMQ5 153 aa1.78□□□□□ -2.12
PTCD3-218ENST00000493430 PMCHP20382 165 aa1.78□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 78.4 ms