RNA–Protein interactions for RNA: ENST00000493380.5

FRMD4A-208, Transcript of FERM domain containing 4A, humanhuman

TSL 1 (best) BASIC

Gene FRMD4A, Length 1,149 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FRMD4A-208ENST00000493380 BCL2L11O43521 198 aa8.43□□□□□ -1.06
FRMD4A-208ENST00000493380 Q6ZNX1 250 aa8.43□□□□□ -1.06
FRMD4A-208ENST00000493380 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.43□□□□□ -1.06
FRMD4A-208ENST00000493380 LYPD6BQ8NI32 183 aa8.43□□□□□ -1.06
FRMD4A-208ENST00000493380 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.42□□□□□ -1.06
FRMD4A-208ENST00000493380 A0A096LNI7 61 aa8.42□□□□□ -1.06
FRMD4A-208ENST00000493380 IGKV2-29A2NJV5 120 aaPredicted RBP8.42□□□□□ -1.06
FRMD4A-208ENST00000493380 NTF3P20783 257 aa8.42□□□□□ -1.06
FRMD4A-208ENST00000493380 AMTP48728 403 aa8.42□□□□□ -1.06
FRMD4A-208ENST00000493380 ZNF345Q14585 488 aa8.42□□□□□ -1.06
FRMD4A-208ENST00000493380 GATD1Q8NB37 220 aa8.42□□□□□ -1.06
FRMD4A-208ENST00000493380 TRAV8-4A0A0B4J246 113 aa8.41□□□□□ -1.06
FRMD4A-208ENST00000493380 UMAD1C9J7I0 102 aa8.41□□□□□ -1.06
FRMD4A-208ENST00000493380 GAS8-AS1O95177 125 aa8.41□□□□□ -1.06
FRMD4A-208ENST00000493380 P01737 135 aa8.41□□□□□ -1.06
FRMD4A-208ENST00000493380 SULT1A2P50226 295 aa8.41□□□□□ -1.06
FRMD4A-208ENST00000493380 PRR3P79522 188 aaKnown RBP8.41□□□□□ -1.06
FRMD4A-208ENST00000493380 MAJINQ3KP22 176 aa8.41□□□□□ -1.06
FRMD4A-208ENST00000493380 NIT2Q9NQR4 276 aa8.41□□□□□ -1.06
FRMD4A-208ENST00000493380 PGLYRP4Q96LB8 373 aa8.4□□□□□ -1.06
FRMD4A-208ENST00000493380 DPH3P1Q9H4G8 78 aa8.4□□□□□ -1.06
FRMD4A-208ENST00000493380 AP5S1Q9NUS5 200 aa8.4□□□□□ -1.06
FRMD4A-208ENST00000493380 H7C1H1 209 aa8.39□□□□□ -1.07
FRMD4A-208ENST00000493380 K7EN84 100 aa8.39□□□□□ -1.07
FRMD4A-208ENST00000493380 CACNG7P62955 275 aa8.39□□□□□ -1.07
FRMD4A-208ENST00000493380 NUDT10Q8NFP7 164 aa8.39□□□□□ -1.07
FRMD4A-208ENST00000493380 GTSF1Q8WW33 167 aa8.39□□□□□ -1.07
FRMD4A-208ENST00000493380 CHCHD10Q8WYQ3 142 aaPredicted RBP8.39□□□□□ -1.07
FRMD4A-208ENST00000493380 NUDT11Q96G61 164 aa8.39□□□□□ -1.07
FRMD4A-208ENST00000493380 RNF185Q96GF1 192 aa8.39□□□□□ -1.07
FRMD4A-208ENST00000493380 RNASE7Q9H1E1 156 aaKnown RBP8.39□□□□□ -1.07
FRMD4A-208ENST00000493380 BATF3Q9NR55 127 aa8.39□□□□□ -1.07
FRMD4A-208ENST00000493380 KANTRA0A1W2PQU2 76 aa8.38□□□□□ -1.07
FRMD4A-208ENST00000493380 UBE2L6O14933 153 aa8.38□□□□□ -1.07
FRMD4A-208ENST00000493380 IFNA1P01562 189 aa8.38□□□□□ -1.07
FRMD4A-208ENST00000493380 CTRLP40313 264 aa8.38□□□□□ -1.07
FRMD4A-208ENST00000493380 RPS10P46783 165 aaKnown RBP8.38□□□□□ -1.07
FRMD4A-208ENST00000493380 GNG4P50150 75 aa8.38□□□□□ -1.07
FRMD4A-208ENST00000493380 FOXI1Q12951 378 aa8.38□□□□□ -1.07
FRMD4A-208ENST00000493380 COTL1Q14019 142 aa8.38□□□□□ -1.07
FRMD4A-208ENST00000493380 RGS21Q2M5E4 152 aa8.38□□□□□ -1.07
FRMD4A-208ENST00000493380 STPG4Q8N801 248 aa8.38□□□□□ -1.07
FRMD4A-208ENST00000493380 MANBALQ9NQG1 85 aa8.38□□□□□ -1.07
FRMD4A-208ENST00000493380 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.37□□□□□ -1.07
FRMD4A-208ENST00000493380 HMSDA8MTL9 139 aa8.37□□□□□ -1.07
FRMD4A-208ENST00000493380 NDUFS6O75380 124 aaKnown RBP8.37□□□□□ -1.07
FRMD4A-208ENST00000493380 RPS20P60866 119 aaKnown RBP8.37□□□□□ -1.07
FRMD4A-208ENST00000493380 LINC01600Q96MT4 127 aa8.37□□□□□ -1.07
FRMD4A-208ENST00000493380 GVQW2A0A096LPI5 108 aaPredicted RBP8.36□□□□□ -1.07
FRMD4A-208ENST00000493380 TRAV1-1A0A0B4J248 108 aa8.36□□□□□ -1.07
FRMD4A-208ENST00000493380 FAM231BA6NCW3 169 aa8.36□□□□□ -1.07
FRMD4A-208ENST00000493380 TRGC1P0CF51 173 aa8.36□□□□□ -1.07
FRMD4A-208ENST00000493380 TWIST1Q15672 202 aa8.36□□□□□ -1.07
FRMD4A-208ENST00000493380 WDR73Q6P4I2 378 aa8.36□□□□□ -1.07
FRMD4A-208ENST00000493380 C9orf62Q8N4C0 152 aa8.36□□□□□ -1.07
FRMD4A-208ENST00000493380 MED9Q9NWA0 146 aa8.36□□□□□ -1.07
FRMD4A-208ENST00000493380 F2Z2F3 143 aa8.35□□□□□ -1.07
FRMD4A-208ENST00000493380 FGF6P10767 208 aa8.35□□□□□ -1.07
FRMD4A-208ENST00000493380 MEF2BQ02080 365 aaPredicted RBP8.35□□□□□ -1.07
FRMD4A-208ENST00000493380 RNASEKQ6P5S7 137 aaKnown RBP8.35□□□□□ -1.07
FRMD4A-208ENST00000493380 C7orf33Q8WU49 177 aa8.35□□□□□ -1.07
FRMD4A-208ENST00000493380 LPAP08519 4548 aa8.34□□□□□ -1.07
FRMD4A-208ENST00000493380 XCL1P47992 114 aa8.34□□□□□ -1.07
FRMD4A-208ENST00000493380 KRTAP10-8P60410 259 aa8.34□□□□□ -1.07
FRMD4A-208ENST00000493380 CNFNQ9BYD5 112 aa8.34□□□□□ -1.07
FRMD4A-208ENST00000493380 AMMECR1LQ6DCA0 310 aa8.33□□□□□ -1.08
FRMD4A-208ENST00000493380 OCC1Q8TAD7 63 aa8.33□□□□□ -1.08
FRMD4A-208ENST00000493380 RPP21Q9H633 154 aaKnown RBP8.33□□□□□ -1.08
FRMD4A-208ENST00000493380 A0A0J9YXV3 536 aa8.32□□□□□ -1.08
FRMD4A-208ENST00000493380 SDHAF1A6NFY7 115 aa8.32□□□□□ -1.08
FRMD4A-208ENST00000493380 CCL25O15444 150 aa8.32□□□□□ -1.08
FRMD4A-208ENST00000493380 BCL2P10415 239 aa8.32□□□□□ -1.08
FRMD4A-208ENST00000493380 LINC00959A0A1B0GUT2 108 aa8.31□□□□□ -1.08
FRMD4A-208ENST00000493380 TSHBP01222 138 aa8.31□□□□□ -1.08
FRMD4A-208ENST00000493380 APCSP02743 223 aa8.31□□□□□ -1.08
FRMD4A-208ENST00000493380 SRSF9Q13242 221 aaKnown RBP eCLIP8.31□□□□□ -1.08
FRMD4A-208ENST00000493380 CFAP161Q6P656 301 aa8.31□□□□□ -1.08
FRMD4A-208ENST00000493380 TMEM242Q9NWH2 141 aa8.31□□□□□ -1.08
FRMD4A-208ENST00000493380 XKRY2A2RUG3 117 aa8.3□□□□□ -1.08
FRMD4A-208ENST00000493380 PDE6DO43924 150 aa8.3□□□□□ -1.08
FRMD4A-208ENST00000493380 RNASE13Q5GAN3 156 aaKnown RBP8.3□□□□□ -1.08
FRMD4A-208ENST00000493380 OR5A1Q8NGJ0 315 aa8.3□□□□□ -1.08
FRMD4A-208ENST00000493380 SMIM12Q96EX1 92 aa8.3□□□□□ -1.08
FRMD4A-208ENST00000493380 A0A1W2PNN7 141 aa8.29□□□□□ -1.08
FRMD4A-208ENST00000493380 ESDP10768 282 aa8.29□□□□□ -1.08
FRMD4A-208ENST00000493380 CARD19Q96LW7 228 aa8.29□□□□□ -1.08
FRMD4A-208ENST00000493380 SMKR1H3BMG3 65 aa8.28□□□□□ -1.08
FRMD4A-208ENST00000493380 NCR2O95944 276 aa8.27□□□□□ -1.09
FRMD4A-208ENST00000493380 PMCHP20382 165 aa8.27□□□□□ -1.09
FRMD4A-208ENST00000493380 EIF5AP63241 154 aaKnown RBP8.27□□□□□ -1.09
FRMD4A-208ENST00000493380 GAGE2BQ13066 116 aa8.26□□□□□ -1.09
FRMD4A-208ENST00000493380 SPINK6Q6UWN8 80 aa8.26□□□□□ -1.09
FRMD4A-208ENST00000493380 KRTAP11-1Q8IUC1 163 aa8.26□□□□□ -1.09
FRMD4A-208ENST00000493380 CDC42SE2Q9NRR3 84 aa8.26□□□□□ -1.09
FRMD4A-208ENST00000493380 IGLV4-69A0A075B6H9 119 aa8.25□□□□□ -1.09
FRMD4A-208ENST00000493380 IGHV1-58A0A0C4DH39 117 aa8.25□□□□□ -1.09
FRMD4A-208ENST00000493380 TRBV6-5A0A0K0K1A5 114 aa8.25□□□□□ -1.09
FRMD4A-208ENST00000493380 I3L3M4 83 aa8.25□□□□□ -1.09
FRMD4A-208ENST00000493380 GATCO43716 136 aaKnown RBP8.25□□□□□ -1.09
FRMD4A-208ENST00000493380 PTTG1IPP53801 180 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms