RNA–Protein interactions for RNA: ENST00000493348.1

TM4SF1-204, Transcript of transmembrane 4 L six family member 1, humanhuman

TSL 2

Gene TM4SF1, Length 976 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1-204ENST00000493348 SMAGPQ0VAQ4 97 aa5.55□□□□□ -1.52
TM4SF1-204ENST00000493348 FAM104BQ5XKR9 115 aa5.55□□□□□ -1.52
TM4SF1-204ENST00000493348 CLRN3Q8NCR9 226 aa5.55□□□□□ -1.52
TM4SF1-204ENST00000493348 RPL39LQ96EH5 51 aaKnown RBP5.55□□□□□ -1.52
TM4SF1-204ENST00000493348 KIR2DL4Q99706 377 aa5.55□□□□□ -1.52
TM4SF1-204ENST00000493348 TMEM243Q9BU79 118 aa5.55□□□□□ -1.52
TM4SF1-204ENST00000493348 CARHSP1Q9Y2V2 147 aaKnown RBP5.55□□□□□ -1.52
TM4SF1-204ENST00000493348 TRAV9-1A0A075B6T8 112 aa5.54□□□□□ -1.52
TM4SF1-204ENST00000493348 TRAV8-3A0A0A6YYJ7 113 aa5.54□□□□□ -1.52
TM4SF1-204ENST00000493348 KRTAP9-6A0A140TA67 174 aa5.54□□□□□ -1.52
TM4SF1-204ENST00000493348 C7orf77A4D0Y5 90 aa5.54□□□□□ -1.52
TM4SF1-204ENST00000493348 PRSS29PA6NIE9 313 aa5.54□□□□□ -1.52
TM4SF1-204ENST00000493348 TCAPO15273 167 aa5.54□□□□□ -1.52
TM4SF1-204ENST00000493348 NCR2O95944 276 aa5.54□□□□□ -1.52
TM4SF1-204ENST00000493348 PPBPP02775 128 aa5.54□□□□□ -1.52
TM4SF1-204ENST00000493348 ANGP03950 147 aaKnown RBP5.54□□□□□ -1.52
TM4SF1-204ENST00000493348 COX19Q49B96 90 aa5.54□□□□□ -1.52
TM4SF1-204ENST00000493348 MRPL51Q4U2R6 128 aaKnown RBP5.54□□□□□ -1.52
TM4SF1-204ENST00000493348 AMMECR1LQ6DCA0 310 aa5.54□□□□□ -1.52
TM4SF1-204ENST00000493348 TM2D2Q9BX73 214 aa5.54□□□□□ -1.52
TM4SF1-204ENST00000493348 Q9HAA7 133 aa5.54□□□□□ -1.52
TM4SF1-204ENST00000493348 TMEM242Q9NWH2 141 aa5.54□□□□□ -1.52
TM4SF1-204ENST00000493348 D6R8Y8 96 aa5.53□□□□□ -1.52
TM4SF1-204ENST00000493348 SMKR1H3BMG3 65 aa5.53□□□□□ -1.52
TM4SF1-204ENST00000493348 VCYO14598 125 aa5.53□□□□□ -1.52
TM4SF1-204ENST00000493348 Q0VG73 95 aa5.53□□□□□ -1.52
TM4SF1-204ENST00000493348 GAGE6Q13070 117 aa5.53□□□□□ -1.52
TM4SF1-204ENST00000493348 LAGE3Q14657 143 aa5.53□□□□□ -1.52
TM4SF1-204ENST00000493348 IQCJQ1A5X6 159 aa5.53□□□□□ -1.52
TM4SF1-204ENST00000493348 C10orf91Q5T1B1 145 aa5.53□□□□□ -1.52
TM4SF1-204ENST00000493348 TMEM136Q6ZRR5 245 aa5.53□□□□□ -1.52
TM4SF1-204ENST00000493348 NIT1Q86X76 327 aa5.53□□□□□ -1.52
TM4SF1-204ENST00000493348 ORMDL3Q8N138 153 aa5.53□□□□□ -1.52
TM4SF1-204ENST00000493348 TMEM18Q96B42 140 aa5.53□□□□□ -1.52
TM4SF1-204ENST00000493348 RNF185Q96GF1 192 aa5.53□□□□□ -1.52
TM4SF1-204ENST00000493348 TMEM101Q96IK0 257 aa5.53□□□□□ -1.52
TM4SF1-204ENST00000493348 COX11Q9Y6N1 276 aa5.53□□□□□ -1.52
TM4SF1-204ENST00000493348 TRBV6-5A0A0K0K1A5 114 aa5.52□□□□□ -1.53
TM4SF1-204ENST00000493348 A0A1B0GXF2 115 aa5.52□□□□□ -1.53
TM4SF1-204ENST00000493348 IBA57-AS1B1ANH7 110 aa5.52□□□□□ -1.53
TM4SF1-204ENST00000493348 RAB5AP20339 215 aa5.52□□□□□ -1.53
TM4SF1-204ENST00000493348 SUMO2P61956 95 aaKnown RBP5.52□□□□□ -1.53
TM4SF1-204ENST00000493348 RNASEKQ6P5S7 137 aaKnown RBP5.52□□□□□ -1.53
TM4SF1-204ENST00000493348 DEFB104AQ8WTQ1 72 aa5.52□□□□□ -1.53
TM4SF1-204ENST00000493348 UBE2WQ96B02 151 aa5.52□□□□□ -1.53
TM4SF1-204ENST00000493348 PRELID3AQ96N28 172 aa5.52□□□□□ -1.53
TM4SF1-204ENST00000493348 C20orf78Q9BR46 151 aa5.52□□□□□ -1.53
TM4SF1-204ENST00000493348 KLK12Q9UKR0 248 aa5.52□□□□□ -1.53
TM4SF1-204ENST00000493348 DNAH10Q8IVF4 4471 aa5.52□□□□□ -1.53
TM4SF1-204ENST00000493348 PHOX2AO14813 284 aa5.51□□□□□ -1.53
TM4SF1-204ENST00000493348 TNFRSF6BO95407 300 aa5.51□□□□□ -1.53
TM4SF1-204ENST00000493348 HLA-DQA1P01909 254 aa5.51□□□□□ -1.53
TM4SF1-204ENST00000493348 DGAT2L7PQ6IED9 249 aa5.51□□□□□ -1.53
TM4SF1-204ENST00000493348 ATRAIDQ6UW56 229 aa5.51□□□□□ -1.53
TM4SF1-204ENST00000493348 TMEM70Q9BUB7 260 aa5.51□□□□□ -1.53
TM4SF1-204ENST00000493348 KRTAP1-5Q9BYS1 174 aa5.51□□□□□ -1.53
TM4SF1-204ENST00000493348 MAP1LC3AQ9H492 121 aa5.51□□□□□ -1.53
TM4SF1-204ENST00000493348 LAMTOR2Q9Y2Q5 125 aa5.51□□□□□ -1.53
TM4SF1-204ENST00000493348 FRAS1Q86XX4 4008 aa5.51□□□□□ -1.53
TM4SF1-204ENST00000493348 DNAH2Q9P225 4427 aa5.51□□□□□ -1.53
TM4SF1-204ENST00000493348 IGKV2D-24A0A075B6R9 120 aa5.5□□□□□ -1.53
TM4SF1-204ENST00000493348 TRBV27A0A0K0K1C4 114 aa5.5□□□□□ -1.53
TM4SF1-204ENST00000493348 H7C423 109 aa5.5□□□□□ -1.53
TM4SF1-204ENST00000493348 RTL8CO15255 209 aa5.5□□□□□ -1.53
TM4SF1-204ENST00000493348 MT-ND6P03923 174 aa5.5□□□□□ -1.53
TM4SF1-204ENST00000493348 RPS10P46783 165 aaKnown RBP5.5□□□□□ -1.53
TM4SF1-204ENST00000493348 RBX1P62877 108 aa5.5□□□□□ -1.53
TM4SF1-204ENST00000493348 MPV17L2Q567V2 206 aa5.5□□□□□ -1.53
TM4SF1-204ENST00000493348 NTM-AS1Q6ZSK4 140 aa5.5□□□□□ -1.53
TM4SF1-204ENST00000493348 C1orf43Q9BWL3 253 aa5.5□□□□□ -1.53
TM4SF1-204ENST00000493348 TRBV24-1A0A075B6N3 115 aa5.49□□□□□ -1.53
TM4SF1-204ENST00000493348 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.49□□□□□ -1.53
TM4SF1-204ENST00000493348 IGKV2-29A2NJV5 120 aaPredicted RBP5.49□□□□□ -1.53
TM4SF1-204ENST00000493348 ZNF25P17030 456 aaPredicted RBP5.49□□□□□ -1.53
TM4SF1-204ENST00000493348 POLR2KP53803 58 aaKnown RBP5.49□□□□□ -1.53
TM4SF1-204ENST00000493348 FABP9Q0Z7S8 132 aa5.49□□□□□ -1.53
TM4SF1-204ENST00000493348 MIAQ16674 131 aa5.49□□□□□ -1.53
TM4SF1-204ENST00000493348 SLC7A5P1Q8MH63 180 aa5.49□□□□□ -1.53
TM4SF1-204ENST00000493348 NRACQ8N912 160 aa5.49□□□□□ -1.53
TM4SF1-204ENST00000493348 Q8N976 141 aa5.49□□□□□ -1.53
TM4SF1-204ENST00000493348 SMIM2Q9BVW6 85 aa5.49□□□□□ -1.53
TM4SF1-204ENST00000493348 GNB1LQ9BYB4 327 aa5.49□□□□□ -1.53
TM4SF1-204ENST00000493348 IGKV3OR2-268A0A0C4DH90 116 aa5.48□□□□□ -1.53
TM4SF1-204ENST00000493348 LOC389332A0A1B0GUA5 103 aa5.48□□□□□ -1.53
TM4SF1-204ENST00000493348 A0A1B0GUV1 79 aa5.48□□□□□ -1.53
TM4SF1-204ENST00000493348 GAS8-AS1O95177 125 aa5.48□□□□□ -1.53
TM4SF1-204ENST00000493348 TSHBP01222 138 aa5.48□□□□□ -1.53
TM4SF1-204ENST00000493348 NPYP01303 97 aa5.48□□□□□ -1.53
TM4SF1-204ENST00000493348 G0S2P27469 103 aa5.48□□□□□ -1.53
TM4SF1-204ENST00000493348 RPL32P62910 135 aaKnown RBP5.48□□□□□ -1.53
TM4SF1-204ENST00000493348 CLPSL2Q6UWE3 100 aa5.48□□□□□ -1.53
TM4SF1-204ENST00000493348 LINC00269Q8N2A0 174 aa5.48□□□□□ -1.53
TM4SF1-204ENST00000493348 OR5A1Q8NGJ0 315 aa5.48□□□□□ -1.53
TM4SF1-204ENST00000493348 DNAH17Q9UFH2 4485 aa5.48□□□□□ -1.53
TM4SF1-204ENST00000493348 TRAV8-4A0A0B4J246 113 aa5.47□□□□□ -1.53
TM4SF1-204ENST00000493348 FGF6P10767 208 aa5.47□□□□□ -1.53
TM4SF1-204ENST00000493348 REG3AQ06141 175 aa5.47□□□□□ -1.53
TM4SF1-204ENST00000493348 PRSS3P2Q8NHM4 247 aa5.47□□□□□ -1.53
TM4SF1-204ENST00000493348 MRPL18Q9H0U6 180 aaKnown RBP5.47□□□□□ -1.53
TM4SF1-204ENST00000493348 NXT2Q9NPJ8 142 aaKnown RBP5.47□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms