RNA–Protein interactions for RNA: ENST00000493306.1

KLF4-204, Transcript of Kruppel like factor 4, humanhuman

TSL 1 (best)

Gene KLF4, Length 2,706 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLF4-204ENST00000493306 BPESC1Q9GZL8 116 aa12.1□□□□□ -0.47
KLF4-204ENST00000493306 EDN2P20800 178 aa12.1□□□□□ -0.47
KLF4-204ENST00000493306 IGHG2P01859 326 aa12.09□□□□□ -0.47
KLF4-204ENST00000493306 SNRPD3P62318 126 aaKnown RBP12.09□□□□□ -0.47
KLF4-204ENST00000493306 SPINK13Q1W4C9 94 aa12.09□□□□□ -0.47
KLF4-204ENST00000493306 FAM104AQ969W3 186 aa12.09□□□□□ -0.47
KLF4-204ENST00000493306 PTPRZ1P23471 2315 aaPredicted RBP12.09□□□□□ -0.47
KLF4-204ENST00000493306 LY6EQ16553 131 aa12.09□□□□□ -0.47
KLF4-204ENST00000493306 C3orf56Q8N813 242 aa12.09□□□□□ -0.47
KLF4-204ENST00000493306 RIF1Q5UIP0 2472 aaKnown RBP12.08□□□□□ -0.48
KLF4-204ENST00000493306 BRD3OSQ6XYD6 125 aa12.08□□□□□ -0.48
KLF4-204ENST00000493306 LINC00694P0DN24 101 aa12.07□□□□□ -0.48
KLF4-204ENST00000493306 ADORA2A-AS1P86434 159 aa12.07□□□□□ -0.48
KLF4-204ENST00000493306 CIRBPQ14011 172 aaKnown RBP12.07□□□□□ -0.48
KLF4-204ENST00000493306 DAND5Q8N907 189 aa12.07□□□□□ -0.48
KLF4-204ENST00000493306 TTC28Q96AY4 2481 aa12.07□□□□□ -0.48
KLF4-204ENST00000493306 COL6A6A6NMZ7 2263 aa12.07□□□□□ -0.48
KLF4-204ENST00000493306 NBASA2RRP1 2371 aa12.07□□□□□ -0.48
KLF4-204ENST00000493306 IGHV3-73A0A0B4J1V6 119 aa12.06□□□□□ -0.48
KLF4-204ENST00000493306 LRRC75A-AS1Q8N1F1 130 aa12.06□□□□□ -0.48
KLF4-204ENST00000493306 EDA2RQ9HAV5 297 aa12.06□□□□□ -0.48
KLF4-204ENST00000493306 LINC00643Q86TS7 51 aa12.05□□□□□ -0.48
KLF4-204ENST00000493306 DUX5Q96PT3 197 aa12.05□□□□□ -0.48
KLF4-204ENST00000493306 COX7A2LO14548 114 aa12.04□□□□□ -0.48
KLF4-204ENST00000493306 C9orf153Q5TBE3 101 aa12.04□□□□□ -0.48
KLF4-204ENST00000493306 ASH1LQ9NR48 2969 aaKnown RBP12.04□□□□□ -0.48
KLF4-204ENST00000493306 A0A1W2PPR1 153 aa12.04□□□□□ -0.48
KLF4-204ENST00000493306 NDUFA1O15239 70 aa12.04□□□□□ -0.48
KLF4-204ENST00000493306 UBE2D4Q9Y2X8 147 aa12.04□□□□□ -0.48
KLF4-204ENST00000493306 IGLV1-40P01703 118 aa12.03□□□□□ -0.48
KLF4-204ENST00000493306 ZNF292O60281 2723 aa12.03□□□□□ -0.48
KLF4-204ENST00000493306 H3BUX3 64 aa12.03□□□□□ -0.48
KLF4-204ENST00000493306 BLCAPP62952 87 aa12.03□□□□□ -0.48
KLF4-204ENST00000493306 FAM19A5Q7Z5A7 132 aaPredicted RBP12.02□□□□□ -0.48
KLF4-204ENST00000493306 J3KT08 172 aa12.02□□□□□ -0.49
KLF4-204ENST00000493306 K7ENP7 123 aa12.02□□□□□ -0.49
KLF4-204ENST00000493306 PROK1P58294 105 aa12.02□□□□□ -0.49
KLF4-204ENST00000493306 C3orf22Q8N5N4 141 aa12.02□□□□□ -0.49
KLF4-204ENST00000493306 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.02□□□□□ -0.49
KLF4-204ENST00000493306 LOC107984640A0A0U1RRK4 108 aa12.02□□□□□ -0.49
KLF4-204ENST00000493306 IGKV2-29A2NJV5 120 aaPredicted RBP12.02□□□□□ -0.49
KLF4-204ENST00000493306 HTN1P15515 57 aa12.02□□□□□ -0.49
KLF4-204ENST00000493306 LINC00308Q8TCZ7 52 aa12.02□□□□□ -0.49
KLF4-204ENST00000493306 COPS9Q8WXC6 57 aa12.02□□□□□ -0.49
KLF4-204ENST00000493306 CHCHD7Q9BUK0 85 aa12.02□□□□□ -0.49
KLF4-204ENST00000493306 CDKN2A-AS1Q9UH64 79 aa12.02□□□□□ -0.49
KLF4-204ENST00000493306 A0A1B0GX51 115 aa12.01□□□□□ -0.49
KLF4-204ENST00000493306 K7EQG2 157 aa12.01□□□□□ -0.49
KLF4-204ENST00000493306 ATP5G1P05496 136 aa12.01□□□□□ -0.49
KLF4-204ENST00000493306 SPTAN1Q13813 2472 aaKnown RBP12.01□□□□□ -0.49
KLF4-204ENST00000493306 UQCRQO14949 82 aa12.01□□□□□ -0.49
KLF4-204ENST00000493306 SMCR5Q8TEV8 140 aa12.01□□□□□ -0.49
KLF4-204ENST00000493306 AKAP6Q13023 2319 aa12□□□□□ -0.49
KLF4-204ENST00000493306 RELNP78509 3460 aa12□□□□□ -0.49
KLF4-204ENST00000493306 DOPEY2Q9Y3R5 2298 aa12□□□□□ -0.49
KLF4-204ENST00000493306 A6NDX4 124 aa12□□□□□ -0.49
KLF4-204ENST00000493306 NDUFA7O95182 113 aa12□□□□□ -0.49
KLF4-204ENST00000493306 DAZ2Q13117 558 aaKnown RBP12□□□□□ -0.49
KLF4-204ENST00000493306 DAZ4Q86SG3 579 aaKnown RBP12□□□□□ -0.49
KLF4-204ENST00000493306 OR13C6PQ8NH95 151 aa12□□□□□ -0.49
KLF4-204ENST00000493306 DAZ3Q9NR90 486 aaKnown RBP12□□□□□ -0.49
KLF4-204ENST00000493306 PTPRQQ9UMZ3 2332 aa11.99□□□□□ -0.49
KLF4-204ENST00000493306 TIRAPP58753 221 aa11.99□□□□□ -0.49
KLF4-204ENST00000493306 LINC00467Q9BRT7 94 aa11.99□□□□□ -0.49
KLF4-204ENST00000493306 Q9H8V8 135 aa11.99□□□□□ -0.49
KLF4-204ENST00000493306 TRACP01848 142 aa11.98□□□□□ -0.49
KLF4-204ENST00000493306 KNCNA6PVL3 124 aa11.98□□□□□ -0.49
KLF4-204ENST00000493306 DGAT2L7PQ6IED9 249 aa11.97□□□□□ -0.49
KLF4-204ENST00000493306 IGLV5-45A0A087WSX0 123 aa11.97□□□□□ -0.49
KLF4-204ENST00000493306 A0A0U1RRA0 63 aa11.97□□□□□ -0.49
KLF4-204ENST00000493306 BAALC-AS2P0C853 105 aa11.97□□□□□ -0.49
KLF4-204ENST00000493306 CXCL5P42830 114 aa11.97□□□□□ -0.49
KLF4-204ENST00000493306 LINC00526Q96FQ7 95 aa11.97□□□□□ -0.49
KLF4-204ENST00000493306 PEMTQ9UBM1 199 aa11.97□□□□□ -0.49
KLF4-204ENST00000493306 SORL1Q92673 2214 aa11.97□□□□□ -0.49
KLF4-204ENST00000493306 IGHV4-38-2P0DP08 117 aa11.96□□□□□ -0.49
KLF4-204ENST00000493306 RPS28P62857 69 aaKnown RBP11.96□□□□□ -0.49
KLF4-204ENST00000493306 ZNF625Q96I27 306 aaPredicted RBP11.96□□□□□ -0.49
KLF4-204ENST00000493306 CFHR3Q02985 330 aa11.96□□□□□ -0.49
KLF4-204ENST00000493306 INAFM2P0DMQ5 153 aa11.95□□□□□ -0.5
KLF4-204ENST00000493306 RNF152Q8N8N0 203 aa11.95□□□□□ -0.5
KLF4-204ENST00000493306 Q9UF83 564 aa11.95□□□□□ -0.5
KLF4-204ENST00000493306 ZFHX2Q9C0A1 2572 aaPredicted RBP11.95□□□□□ -0.5
KLF4-204ENST00000493306 IGHV3-38A0A0C4DH36 116 aa11.95□□□□□ -0.5
KLF4-204ENST00000493306 RBMY1A1P0DJD3 496 aaKnown RBP11.95□□□□□ -0.5
KLF4-204ENST00000493306 RBMY1CP0DJD4 496 aa11.95□□□□□ -0.5
KLF4-204ENST00000493306 HERVK_113P63121 156 aa11.95□□□□□ -0.5
KLF4-204ENST00000493306 RBMY1FQ15415 496 aaKnown RBP11.95□□□□□ -0.5
KLF4-204ENST00000493306 SDIM1Q6ZPB5 146 aa11.95□□□□□ -0.5
KLF4-204ENST00000493306 ABCA2Q9BZC7 2435 aa11.94□□□□□ -0.5
KLF4-204ENST00000493306 Q8N2B8 174 aa11.94□□□□□ -0.5
KLF4-204ENST00000493306 IGLV5-39A0A0G2JS06 123 aa11.93□□□□□ -0.5
KLF4-204ENST00000493306 Q6ZSN1 163 aa11.93□□□□□ -0.5
KLF4-204ENST00000493306 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.93□□□□□ -0.5
KLF4-204ENST00000493306 NACAE9PAV3 2078 aa11.93□□□□□ -0.5
KLF4-204ENST00000493306 BEAN1Q3B7T3 259 aa11.93□□□□□ -0.5
KLF4-204ENST00000493306 FAM222AQ5U5X8 452 aa11.93□□□□□ -0.5
KLF4-204ENST00000493306 C5orf38Q86SI9 138 aa11.93□□□□□ -0.5
KLF4-204ENST00000493306 PSMB8P28062 276 aa11.92□□□□□ -0.5
KLF4-204ENST00000493306 ZNF415Q09FC8 603 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms