RNA–Protein interactions for RNA: ENST00000491791.1

USP4-214, Transcript of ubiquitin specific peptidase 4, humanhuman

TSL 3

Gene USP4, Length 821 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP4-214ENST00000491791 TMEM263Q8WUH6 116 aaKnown RBP7.76□□□□□ -1.17
USP4-214ENST00000491791 C1QTNF4Q9BXJ3 329 aa7.76□□□□□ -1.17
USP4-214ENST00000491791 TRRAPQ9Y4A5 3859 aa7.76□□□□□ -1.17
USP4-214ENST00000491791 C11orf86A6NJI1 115 aa7.75□□□□□ -1.17
USP4-214ENST00000491791 H3BRM9 83 aa7.75□□□□□ -1.17
USP4-214ENST00000491791 SAP30O75446 220 aa7.75□□□□□ -1.17
USP4-214ENST00000491791 LINC00482Q8N8I6 264 aa7.75□□□□□ -1.17
USP4-214ENST00000491791 OR11H2Q8NH07 326 aa7.75□□□□□ -1.17
USP4-214ENST00000491791 TRBV10-1A0A0K0K1A3 114 aa7.74□□□□□ -1.17
USP4-214ENST00000491791 INSL3P51460 131 aa7.74□□□□□ -1.17
USP4-214ENST00000491791 KRTAP10-3P60369 221 aa7.74□□□□□ -1.17
USP4-214ENST00000491791 RPL39P62891 51 aaKnown RBP7.74□□□□□ -1.17
USP4-214ENST00000491791 MAPKAPK5-AS1Q8N8E1 139 aa7.74□□□□□ -1.17
USP4-214ENST00000491791 CSNK1G2-AS1Q8NCQ2 148 aa7.74□□□□□ -1.17
USP4-214ENST00000491791 AMELXQ99217 191 aa7.74□□□□□ -1.17
USP4-214ENST00000491791 OVOL2Q9BRP0 275 aa7.74□□□□□ -1.17
USP4-214ENST00000491791 CHAC1Q9BUX1 264 aa7.74□□□□□ -1.17
USP4-214ENST00000491791 XCL2Q9UBD3 114 aa7.74□□□□□ -1.17
USP4-214ENST00000491791 TNFRSF18Q9Y5U5 241 aa7.74□□□□□ -1.17
USP4-214ENST00000491791 SORL1Q92673 2214 aa7.74□□□□□ -1.17
USP4-214ENST00000491791 MYMXA0A1B0GTQ4 84 aa7.73□□□□□ -1.17
USP4-214ENST00000491791 AZU1P20160 251 aa7.73□□□□□ -1.17
USP4-214ENST00000491791 UBE2V1Q13404 147 aa7.73□□□□□ -1.17
USP4-214ENST00000491791 HIST2H2BDQ6DRA6 164 aa7.73□□□□□ -1.17
USP4-214ENST00000491791 Q6ZSN1 163 aa7.73□□□□□ -1.17
USP4-214ENST00000491791 FAM104AQ969W3 186 aa7.73□□□□□ -1.17
USP4-214ENST00000491791 TIMM21Q9BVV7 248 aa7.73□□□□□ -1.17
USP4-214ENST00000491791 SPANXA1Q9NS26 97 aa7.73□□□□□ -1.17
USP4-214ENST00000491791 NACAE9PAV3 2078 aa7.72□□□□□ -1.17
USP4-214ENST00000491791 IGLV4-3A0A075B6K6 122 aa7.72□□□□□ -1.17
USP4-214ENST00000491791 TRAV4A0A0B4J268 109 aa7.72□□□□□ -1.17
USP4-214ENST00000491791 HTN1P15515 57 aa7.72□□□□□ -1.17
USP4-214ENST00000491791 HERVK_113P61574 105 aa7.72□□□□□ -1.17
USP4-214ENST00000491791 C16orf74Q96GX8 76 aa7.72□□□□□ -1.17
USP4-214ENST00000491791 NOTCH1P46531 2555 aa7.72□□□□□ -1.17
USP4-214ENST00000491791 VWFP04275 2813 aa7.71□□□□□ -1.17
USP4-214ENST00000491791 TRBV7-3A0A075B6L6 115 aa7.71□□□□□ -1.18
USP4-214ENST00000491791 A0A1B0GWB2 263 aa7.71□□□□□ -1.18
USP4-214ENST00000491791 PLAC8L1A1L4L8 177 aa7.71□□□□□ -1.18
USP4-214ENST00000491791 C9orf118A6NHY6 69 aa7.71□□□□□ -1.18
USP4-214ENST00000491791 PRM2P04554 102 aa7.71□□□□□ -1.18
USP4-214ENST00000491791 MRPS36P82909 103 aaKnown RBP7.71□□□□□ -1.18
USP4-214ENST00000491791 CEND1Q8N111 149 aa7.71□□□□□ -1.18
USP4-214ENST00000491791 ZNRF2Q8NHG8 242 aa7.71□□□□□ -1.18
USP4-214ENST00000491791 PRADC1Q9BSG0 188 aa7.71□□□□□ -1.18
USP4-214ENST00000491791 CHCHD7Q9BUK0 85 aa7.71□□□□□ -1.18
USP4-214ENST00000491791 TTTY13Q9BZ97 58 aa7.7□□□□□ -1.18
USP4-214ENST00000491791 VCX2Q9H322 139 aa7.7□□□□□ -1.18
USP4-214ENST00000491791 MRPL16Q9NX20 251 aaKnown RBP7.7□□□□□ -1.18
USP4-214ENST00000491791 TRAV8-6A0A0B4J262 113 aa7.69□□□□□ -1.18
USP4-214ENST00000491791 TMEM223A0PJW6 202 aa7.69□□□□□ -1.18
USP4-214ENST00000491791 CCL25O15444 150 aa7.69□□□□□ -1.18
USP4-214ENST00000491791 OR4C5Q8NGB2 326 aa7.69□□□□□ -1.18
USP4-214ENST00000491791 PHLDA1Q8WV24 401 aaPredicted RBP7.69□□□□□ -1.18
USP4-214ENST00000491791 UBE2D4Q9Y2X8 147 aa7.69□□□□□ -1.18
USP4-214ENST00000491791 CSDC2Q9Y534 153 aaKnown RBP7.69□□□□□ -1.18
USP4-214ENST00000491791 WNK1Q9H4A3 2382 aa7.68□□□□□ -1.18
USP4-214ENST00000491791 IGHV3-73A0A0B4J1V6 119 aa7.68□□□□□ -1.18
USP4-214ENST00000491791 LEPROTO15243 131 aa7.68□□□□□ -1.18
USP4-214ENST00000491791 SMIM13P0DJ93 91 aa7.68□□□□□ -1.18
USP4-214ENST00000491791 COTL1Q14019 142 aa7.68□□□□□ -1.18
USP4-214ENST00000491791 FAM19A3Q7Z5A8 133 aa7.68□□□□□ -1.18
USP4-214ENST00000491791 DAZ4Q86SG3 579 aaKnown RBP7.68□□□□□ -1.18
USP4-214ENST00000491791 LINC00612Q8N6U2 182 aa7.68□□□□□ -1.18
USP4-214ENST00000491791 OR5A1Q8NGJ0 315 aa7.68□□□□□ -1.18
USP4-214ENST00000491791 DAZ3Q9NR90 486 aaKnown RBP7.68□□□□□ -1.18
USP4-214ENST00000491791 SPANXB1Q9NS25 103 aaPredicted RBP7.68□□□□□ -1.18
USP4-214ENST00000491791 TRGV1A0A0A0MS02 117 aa7.67□□□□□ -1.18
USP4-214ENST00000491791 TINCRA0A1B0GVN0 87 aa7.67□□□□□ -1.18
USP4-214ENST00000491791 TRBV6-4A0A1B0GX49 114 aa7.67□□□□□ -1.18
USP4-214ENST00000491791 K7EQD1 137 aa7.67□□□□□ -1.18
USP4-214ENST00000491791 PF4P02776 101 aa7.67□□□□□ -1.18
USP4-214ENST00000491791 PTTG1IPP53801 180 aa7.67□□□□□ -1.18
USP4-214ENST00000491791 FXYD2P54710 66 aa7.67□□□□□ -1.18
USP4-214ENST00000491791 TCTAP57738 103 aa7.67□□□□□ -1.18
USP4-214ENST00000491791 C9orf66Q5T8R8 295 aa7.67□□□□□ -1.18
USP4-214ENST00000491791 Q6ZVH6 145 aa7.67□□□□□ -1.18
USP4-214ENST00000491791 CITED1Q99966 193 aa7.67□□□□□ -1.18
USP4-214ENST00000491791 Q9UF83 564 aa7.67□□□□□ -1.18
USP4-214ENST00000491791 SMIM9A6NGZ8 99 aa7.66□□□□□ -1.18
USP4-214ENST00000491791 H7C423 109 aa7.66□□□□□ -1.18
USP4-214ENST00000491791 ZNF22P17026 224 aaPredicted RBP7.66□□□□□ -1.18
USP4-214ENST00000491791 UBE2D3P61077 147 aa7.66□□□□□ -1.18
USP4-214ENST00000491791 UBE2D2P62837 147 aa7.66□□□□□ -1.18
USP4-214ENST00000491791 RPL36AP83881 106 aaKnown RBP7.66□□□□□ -1.18
USP4-214ENST00000491791 SMAGPQ0VAQ4 97 aa7.66□□□□□ -1.18
USP4-214ENST00000491791 RRN3P1Q2M238 152 aa7.66□□□□□ -1.18
USP4-214ENST00000491791 Q6ZTI0 123 aa7.66□□□□□ -1.18
USP4-214ENST00000491791 SBSPONQ8IVN8 264 aa7.66□□□□□ -1.18
USP4-214ENST00000491791 WFDC9Q8NEX5 89 aa7.66□□□□□ -1.18
USP4-214ENST00000491791 KIR2DL5BQ8NHK3 375 aa7.66□□□□□ -1.18
USP4-214ENST00000491791 RPL36ALQ969Q0 106 aaKnown RBP7.66□□□□□ -1.18
USP4-214ENST00000491791 PLEKHB2Q96CS7 222 aa7.66□□□□□ -1.18
USP4-214ENST00000491791 ZNF479Q96JC4 524 aa7.66□□□□□ -1.18
USP4-214ENST00000491791 GTSF1LQ9H1H1 148 aa7.66□□□□□ -1.18
USP4-214ENST00000491791 IGLV5-45A0A087WSX0 123 aa7.65□□□□□ -1.18
USP4-214ENST00000491791 A0A0J9YY99 117 aa7.65□□□□□ -1.18
USP4-214ENST00000491791 ZNF815PA8K554 130 aa7.65□□□□□ -1.18
USP4-214ENST00000491791 J3QQQ9 107 aa7.65□□□□□ -1.18
USP4-214ENST00000491791 GCSHP23434 173 aa7.65□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms